Probing the primordial Universe with MeerKAT and DES

It is usually assumed that we will need to wait until next-generation surveys like Euclid, LSST and SKA, in order to improve on the current best constraints on primordial non-Gaussianity from the Planck experiment. We show that two contemporary surveys, with the SKA precursor MeerKAT and the Dark Energy Survey (DES), can be combined using the multi-tracer technique to deliver an accuracy on measurement of $f_{\rm NL}$ that is up to three times better than Planck.Comment: 7 pages, 5 figures, 1 table. We now marginalise over the bias, and ensure that we exclude nonlinear scales, leading to small quantitative corrections. Version accepted by MNRA

Energetics of ion competition in the DEKA selectivity filter of neuronal sodium channels

The energetics of ionic selectivity in the neuronal sodium channels is studied. A simple model constructed for the selectivity filter of the channel is used. The selectivity filter of this channel type contains aspartate (D), glutamate (E), lysine (K), and alanine (A) residues (the DEKA locus). We use Grand Canonical Monte Carlo simulations to compute equilibrium binding selectivity in the selectivity filter and to obtain various terms of the excess chemical potential from a particle insertion procedure based on Widom's method. We show that K$^{+}$ ions in competition with Na$^{+}$ are efficiently excluded from the selectivity filter due to entropic hard sphere exclusion. The dielectric constant of protein has no effect on this selectivity. Ca$^{2+}$ ions, on the other hand, are excluded from the filter due to a free energetic penalty which is enhanced by the low dielectric constant of protein.Comment: 14 pages, 7 figure

Droplet mixer based on siphon-induced flow discretization and phase shifting

We present a novel mixing principle for centrifugal microfluidic platforms. Siphon structures are designed to disrupt continuous flows in a controlled manner into a sequence of discrete droplets, displaying individual volumes as low as 60 nL. When discrete volumes of different liquids are alternately issued into a common reservoir, a striation pattern of alternating liquid layers is obtained. In this manner diffusion distances are drastically decreased and a fast and homogeneous mixing is achieved. Efficient mixing is demonstrated for a range of liquid combinations of varying fluid properties such as aqueous inks or saline solutions and human plasma. Volumes of 5 muL have been mixed in less than 20 s to a high mixing quality. One-step dilutions of plasma in a standard phosphate buffer solution up to 1:5 are also demonstrated

Role of WFS1 in Regulating Endoplasmic Reticulum Stress Signaling: A Dissertation

The endoplasmic reticulum (ER) is a multi-functional cellular compartment that functions in protein folding, lipid biosynthesis, and calcium homeostasis. Perturbations to ER function lead to the dysregulation of ER homeostasis, causing the accumulation of unfolded and misfolded proteins in the cell. This is a state of ER stress. ER stress elicits a cytoprotective, adaptive signaling cascade to mitigate stress, the Unfolded Protein Response (UPR). As long as the UPR can moderate stress, cells can produce the proper amount of proteins and maintain a state of homeostasis. If the UPR, however, is dysfunctional and fails to achieve this, cells will undergo apoptosis. Diabetes mellitus is a group of metabolic disorders characterized by persistent high blood glucose levels. The pathogenesis of this disease involves pancreatic β-cell dysfunction: an abnormality in the primary function of the β-cell, insulin production and secretion. Activation of the UPR is critical to pancreatic β-cell survival, where a disruption in ER stress signaling can lead to cell death and consequently diabetes. There are several models of ER stress leading to diabetes. Wolcott-Rallison syndrome, for example, occurs when there is a mutation in the gene encoding one of the master regulators of the UPR, PKR-like ER kinase (PERK). In this dissertation, we show that Wolfram Syndrome 1 (WFS1), an ER transmembrane protein, is a component of the UPR and is a downstream target of two of the master regulators of the UPR, Inositol Requiring 1 (IRE1) and PERK. WFS1 mutations lead to Wolfram syndrome, a non-autoimmune form of type 1 diabetes accompanied by optical atrophy and other neurological disorders. It has been shown that patients develop diabetes due to the selective loss of their pancreatic β-cells. Here we define the underlying molecular mechanism of β-cell loss in Wolfram syndrome, and link this cell loss to ER stress and a dysfunction in a component of the UPR, WFS1. We show that WFS1 expression is localized to the β-cell of the pancreas, it is upregulated during insulin secretion and ER stress, and its inactivation leads to chronic ER stress and apoptosis. This dissertation also reveals the previously unknown function of WFS1 in the UPR. Positive regulation of the UPR has been extensively studied, however, the precise mechanisms of negative regulation of this signaling pathway have not. Here we report that WFS1 regulates a key transcription factor of the UPR, activating transcription factor 6 (ATF6), through the ubiquitin-proteasome pathway. WFS1 expression decreases expression levels of ATF6 target genes and represses ATF6-mediated activation of the ER stress response (ERSE) promoter. WFS1 recruits and stabilizes an E3 ubiquitin ligase, HMG-CoA reductase degradation protein 1 (HRD1), on the ER membrane. The WFS1-HRD1 complex recruits ATF6 to the proteasome and enhances its ubiquitination and proteasome-mediated degradation, leading to suppression of the UPR under non-stress conditions. In response to ER stress, ATF6 is released from WFS1 and activates the UPR to mitigate ER stress. This body of work reveals a novel role for WFS1 in the UPR, and a novel mechanism for regulating ER stress signaling. These findings also indicate that hyperactivation of the UPR can lead to cellular dysfunction and death. This supports the notion that tight regulation of ER stress signaling is crucial to cell survival. This unanticipated role of WFS1 for a feedback loop of the UPR is relevant to diseases caused by chronic hyperactivation of ER stress signaling network such as pancreatic β-cell death in diabetes and neurodegeneration

Obesity: Guidelines Based in the Casuistry of a Pediatric Endocrinology Outpatient Clinic

A obesidade tem vindo a tornar-se um problema cada vez mais prevalente nas crianças e nos jovens dos países economicamente desafogados, sendo, na sua maioria, o resultado de erros alimentares e de uma vida sedentária. O objectivo deste trabalho é avaliar as características das crianças e dos jovens enviados pela primeira vez à Consulta de Endocrinologia do Hospital de Dona Estefânia (HDE) no ano de 1999 por obesidade, no que diz respeito às causas e consequências da mesma, e aos resultados do seguimento. Durante o ano referido foram avaliados 107 crianças e adolescentes em consulta de primeira vez por obesidade, constituindo 36 % dos motivos de primeira consulta. O índice de massa corporal (IMC) era superior a 30 em 26 % dos doentes. Cerca de metade apresentavam antecedentes familiares de obesidade e ou diabetes mellitus tipo 2. Treze por cento apresentavam alterações ortopédicas provocadas ou agravadas pela obesidade e 9 % tinham valores de tensão arterial superiores ao P95 para o sexo e idade. Verificaram-se também alterações da tolerância à glicose, hiperinsulinismo, hipercolesterolemia e hipertrigliceridemia. Cinquenta e um por cento dos indivíduos tiveram apenas duas consultas, e a redução de peso na segunda consulta obteve-se em 62 % dos casos. Com base em trabalhos recentes, propõe-se um protocolo de abordagem destes doentes que permita uma selecção, de forma a identificar patologias que requeiram tratamento adequado