Analysis of total metabolites and proteins in Eucalyptus grandis leaves during the infection by Puccinia psidii

Os mecanismos moleculares envolvidos na resistência de plantas contra patógenos são um tema bastante discutido no meio acadêmico, sendo o objetivo maior dos estudos a diminuição das perdas de produtividade provocadas por doenças em plantações do mundo todo. Muitos modelos de interação patógeno-hospedeiro foram propostos e desenvolvidos priorizando plantas e culturas de rápido desenvolvimento com ciclo de vida curto. Espécies de ciclo longo, porém, devem lidar durante anos - ao menos até a idade reprodutiva - contra o ataque de bactérias, fungos e vírus, sem contar, nesse meio tempo, com recombinações genéticas e mutações que tornariam possível o escape contra as moléstias causadas por microrganismos. Assim, como alternativa aos modelos usuais, o presente trabalho estudou um diferente par de antagonistas: Eucalyptus grandis e Puccinia psidii. Apesar da contribuição de programas de melhoramento genético, o patossistema E. grandis X P. psidii ainda é pouco descrito no nível molecular, havendo poucos estudos sobre os processos e as moléculas que agem de forma a conferir resistência às plantas. Assim, buscando o melhor entendimento da relação entre E. grandis X P. psidii, o presente trabalho estudou a mudança dos perfis de proteínas e metabólitos secundários ocorrida nos tecidos foliares de plantas resistentes e susceptíveis durante a infecção pelo patógeno, com o auxílio da técnica de cromatografia líquida acoplada à espectrometria de massas. Os resultados obtidos indicam que as plantas resistentes percebem a presença do patógeno logo nas primeiras horas pós-infecção, produzindo proteínas ligadas à imunidade (HSP90, ILITYHIA, LRR Kinase, NB-ARC disease resistance protein). Essa percepção desencadeia a produção de proteínas de parede celular e de resposta oxidativa, além de modificar o metabolismo primário e secundário. As plantas susceptíveis, por outro lado, têm o metabolismo subvertido, produzindo proteínas responsáveis pelo afrouxamento da parede celular, beneficiando a absorção de nutrientes, crescimento e propagação de P. psidii. No trabalho também são propostos metabólitos biomarcadores de resistência, moléculas biomarcadoras de resposta imune e sinais da infecção por patógeno em E. grandis.The molecular mechanisms involved in the plant resistance against pathogens is a well-discussed theme in the academy, overall objecting to diminish worldwide plantation yield losses caused by diseases. Many pathogen-host models were proposed and developed prioritizing model plants and fast growing crops with short life cycles. However, long life cycle species need to cope with the attack of bacteria, fungi and virus throughout many years, or at least until its reproduction period, being unable, meanwhile, to escape the attack of these microorganisms through genetic recombination and mutation. Therefore, as an alternative to the usual models, the present work studied a different pair of antagonists: Eucalyptus grandis and Puccinia psidii. Despite the contribution of plant breeding programs, the E. grandis X P. psidii pathosystem is still poorly described in the molecular level, with few studies about processes and molecules that confer resistance to the plants. Thus, in order to better understand the E. grandis X P. psidii relationship, this project aimed to study the proteome and metabolome changes that occur on leaf tissues of resistant and susceptible plants infected by the pathogen, with the aid of the liquid chromatography coupled to mass spectrometry technique. The results show that the resistant plants notice the presence of the pathogen shortly after being infected, producing immunity related proteins such as HSP90, ILITYHIA, LRR Kinase, NB-ARC disease resistance protein. This perception triggers the production of cell wall and oxidative burst proteins, also changing the primary and secondary metabolism. On the other hand, susceptible plants have its metabolism subverted, producing proteins responsible for the cell wall loosening, favoring P. psidii nutrient uptake, growth and spread. Metabolite biomarkers, Immune response biomarker molecules and infection signals triggered by P. psidii on E. grandis are also proposed on this work

Label-Free Quantitative Proteomic Analysis of <i>Puccinia psidii</i> Uredospores Reveals Differences of Fungal Populations Infecting Eucalyptus and Guava

<div><p><i>Puccinia psidii</i> sensu lato (s.l.) is the causal agent of eucalyptus and guava rust, but it also attacks a wide range of plant species from the myrtle family, resulting in a significant genetic and physiological variability among populations accessed from different hosts. The uredospores are crucial to <i>P</i>. <i>psidii</i> dissemination in the field. Although they are important for the fungal pathogenesis, their molecular characterization has been poorly studied. In this work, we report the first in-depth proteomic analysis of <i>P</i>. <i>psidii</i> s.l. uredospores from two contrasting populations: guava fruits (PpGuava) and eucalyptus leaves (PpEucalyptus). NanoUPLC-MS^E was used to generate peptide spectra that were matched to the UniProt <i>Puccinia</i> genera sequences (UniProt database) resulting in the first proteomic analysis of the phytopathogenic fungus <i>P</i>. <i>psidii</i>. Three hundred and fourty proteins were detected and quantified using Label free proteomics. A significant number of unique proteins were found for each sample, others were significantly more or less abundant, according to the fungal populations. In PpGuava population, many proteins correlated with fungal virulence, such as malate dehydrogenase, proteossomes subunits, enolases and others were increased. On the other hand, PpEucalyptus proteins involved in biogenesis, protein folding and translocation were increased, supporting the physiological variability of the fungal populations according to their protein reservoirs and specific host interaction strategies.</p></div

Gene ontology of biological process terms in the proteomic analysis.

<p>Bar graph represents the ratio of % composition of term in the proteomic data.</p

Proteins identified from <i>P</i>. <i>psidii</i> uredospore populations.

<p>The proteins exclusively found in PpGuava (right) and PpEucalyptus (left) and common to both populations (center). Of the common proteins, 25 and 120 whose abundance were increased in PpEucalyptus and PpGuava, respectively.</p

Morphological and viability analysis of <i>Puccinia psidii</i> uredospores.

<p><i>P</i>. <i>psidii</i> uredospores from <i>E</i>. <i>grandis</i><b>(A)</b> and <i>P</i>. <i>guajava</i><b>(B)</b> exhibit similar morphology and germination viability, respectively <b>(C and D)</b>.The arrows indicate the fungal germ tube in both uredospore populations, 24 hours after inoculation in water-agar medium. Light microscopy images of PpEucalyptus and PpGuava uredospores are shown at 100 X (A and B) and 200 X (C and D) magnification. Scale bar: 20 μm in A and B, 50 μm in C and D.</p

Eucalyptus infection by guava and eucalyptus rust.

<p>Symptoms induced by inoculation of <i>P</i>. <i>psidii</i> uredospores from PpEucalyptus <b>(A)</b> on <i>E</i>. <i>grandis</i> variety D901. This clone is rust susceptible when grown under field conditions. The white arrows indicate the fungal pustules. The leaves are shown 15 days after inoculation.The PpGuava populations <b>(B)</b> and control <b>(C)</b> did not show typical rust symptoms.</p

Protein profiles in PpGuava and PpEucalyptus and the correlation with their physiological variability.

<p>While proteins correlated to fungal virulence and stress response had the abundance increased in PpGuava, proteins related to biogenesis, protein folding and translation had the abundance increased in PpEucalyptus.</p