Alien Registration- Hartin, Forest F. (Island Falls, Aroostook County)

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Time integration in the code Zgoubi and external usage of PTC's structures

The purpose of this note is to describe Zgoubi's integrator and to describe some pitfals for time based integration when used in accelerators. We show why the convergence rate of an integrator can be affected by an improper treatment at the boundary when time is used as the integration variable. We also point out how the code PTC can be used as a container by other tracking engine. This work is not completed as far as incorporation of Zgoubi is concerned

Map creation and analysis via overloaded tools in FORTRAN 90

In tracking codes there is the need to obtain, at run time, various machine quantities which depend parametically on things such as momentum or quadrupole strength. To this end we have overloaded (in FORTRAN 90) Berz' DA package [1] as well as the analysis library LieLib [2,3] which is based on this package and we have created polymorphic types. Runtime polymorphism is not interpretation as in COSY-INFINITY [4] and is more appropriate to large ring tracking codes. Consequently we have applied these tools to the code SixTrack [6]

Relativistic calculation of the triton binding energy and its implications

First results for the triton binding energy obtained from the relativistic spectator or Gross equation are reported. The Dirac structure of the nucleons is taken into account. Numerical results are presented for a family of realistic OBE models with off-shell scalar couplings. It is shown that these off-shell couplings improve both the fits to the two-body data and the predictions for the binding energy.Comment: 5 pages, RevTeX 3.0, 1 figure (uses epsfig.sty

Introduction to the polymorphic tracking code: Fibre bundles, polymorphic Taylor types and "Exact tracking"

This is a description of the basic ideas behind the ``Polymorphic Tracking Code'' or PTC. PTC is truly a ``kick code'' or symplectic integrator in the tradition of TRACYII, SixTrack, and TEAPOT. However it separates correctly the mathematical atlas of charts and the magnets at a structural level by implementing a ``restricted fibre bundle.'' The resulting structures allow backward propagation and recirculation, something not possible in standard tracking codes. Also PTC is polymorphic in handling real (single, double and even quadruple precision) and Taylor series. Therefore it has all the tools associated to the TPSA packages: Lie methods, Normal Forms, Cosy-Infinity capabilities, beam envelopes for radiation, etc., as well as parameter dependence on-the-fly. However PTC is an integrator, and as such, one must, generally, adhere to the Talman ``exactness'' view of modelling. Incidentally, it supports exact sector and rectangular bends as well. Of course, one can certainly bypass its integrator and the user is free to violate Talman's principles on his own; PTC provides the tools to dig one's grave but not the encouragement. The reader will find in Appendix B a PowerPoint presentation of FPP. The presentation is a bit out of date but it gives a good idea of FPP which is essential to PTC. FPP is a stand-alone library and can be used by anyone with a FORTRAN90 compiler. This presentation is also, to be honest, a place where the authors intend to document very incompletely nearly two years of work: the development of FPP and subsequently that of PTC. Our ultimate intention is to morph PTC completely into MAD-X. The code MAD-X is an upgrade of MAD-8 and not of the C++ CLASSIC based code MAD-9. The present document does not address when and how this will be done. It is also our goal to link, if possible, PTC with CAD programs for the design of complex follow-the-terrain beam lines. So far FPP and PTC have been used in the design of beam separators (complex polymorphs) and recirculators. They have also been linked with the code BMAD from Cornell. There is still a lot of work to be done if these tools are to be generally usable by a wide range of people. In addition, more complex structures will be needed to handle effects beyond single particle dynamics in a way which respects the fundamental mathematical integrity of the structures of PTC

Soliton self-modulation of the turbulence amplitude and plasma rotation

The space-uniform amplitude envelope of the Ion Temperature Gradient driven turbulence is unstable to small perturbations and evolves to nonuniform, soliton-like modulated profiles. The induced poloidal asymmetry of the transport fluxes can generate spontaneous poloidal spin-up of the tokamak plasma.Comment: Latex file, 66 pages, 24 postscript figures included. New section on rotation five new figures, comparison with magnetic pumping dampin

Visualization of oxygen distribution patterns caused by coral and algae.

Planar optodes were used to visualize oxygen distribution patterns associated with a coral reef associated green algae (Chaetomorpha sp.) and a hermatypic coral (Favia sp.) separately, as standalone organisms, and placed in close proximity mimicking coral-algal interactions. Oxygen patterns were assessed in light and dark conditions and under varying flow regimes. The images show discrete high oxygen concentration regions above the organisms during lighted periods and low oxygen in the dark. Size and orientation of these areas were dependent on flow regime. For corals and algae in close proximity the 2D optodes show areas of extremely low oxygen concentration at the interaction interfaces under both dark (18.4 ± 7.7 µmol O2 L(- 1)) and daylight (97.9 ± 27.5 µmol O2 L(- 1)) conditions. These images present the first two-dimensional visualization of oxygen gradients generated by benthic reef algae and corals under varying flow conditions and provide a 2D depiction of previously observed hypoxic zones at coral algae interfaces. This approach allows for visualization of locally confined, distinctive alterations of oxygen concentrations facilitated by benthic organisms and provides compelling evidence for hypoxic conditions at coral-algae interaction zones