The ontogenetic development of orientation capabilities

The effects of celestial references on the navigation ability of birds are discussed. Tests were conducted in a planetarium with indigo buntings to determine the amount of stellar pattern which could be removed before disorientation occurred. It was determined that young birds have a predisposition to respond to the apparent rotational motion of the night sky. It was concluded that the peak in responsiveness to rotational information is presented during the first summer of life, prior to the first migration season

Reproductive sharing in animal societies: reproductive incentives or incomplete control by dominant breeders?

Optimal skew models explain reproductive sharing within social groups as resulting from reproductive incentives given by controlling dominants to subordinates in return for peaceful cooperation. We explore two versions of an alternative, the incomplete control model, for the evolution of reproductive sharing within groups. In this model, dominants have only limited control over the allocation of reproduction and must expend effort to increase their share of the total group output We show that, when the relatedness between dominant and subordinate is symmetrical, (1) the subordinate's fraction of reproduction either increases with, or is insensitive to, the subordinate's genetic relatedness, r, to the dominant in both versions of the incomplete control model, whereas the subordinate's fraction of reproduction decreases with increasing rin the optimal skew model, (2) the subordinate's share of reproduction in the incomplete control model must exceed that in the optimal skew model, and (3) ecological factors affecting solitary breeding success do not directly affect the subordinate's share of reproduction in incomplete control model but do in the optimal skew model. When dominant-subordinate relatedness is asymmetrical (as is often the case in parent-offspring associations), the incomplete control model predicts no reproduction by the subordinate offspring regardless of group size for groups containing any mixture of unrelated and full-sibling subordinates, whereas the optimal skew models predict that such reproduction is possible when the group size is three or more. The available evidence indicates a negative relationship between relatedness and a subordinate's reproductive share in both vertebrate and hymenopteran societies, apparently supporting the predictions of the optimal skew not incomplete control, class of models. However, such a negative relationship is not necessarily inconsistent with the incomplete control model when, as is true for some vertebrate studies, it results from a comparison of skews in genetically monogamous, nonincestuous groups of parents and their offspring (asymmetric relatednesses) with skews in groups of nonkin (symmetric relatednesses). Both models predict higher skews in parent-offspring associations. Occasional reproduction by subordinate offspring in groups of asymmetrical relatedness when such groups are larger than dyads is more consistent with the optimal skew model, however. Overall, current data on reproductive skew and its relationships to intragroup aggression and ecological constraints support the optimal skew model, but more data are needed to rule out the incomplete control model. These models are examples of two different general views of intrasocietal evolution: the tug-of-war view, in which group members engage in a struggle over resources, and the transactional view, in which group members exchange parcels of reproduction to induce beneficial behavior from each other

Ecological genomics: steps towards unraveling the genetic basis of inducible defenses in Daphnia

Little is known about the genetic mechanisms underlying inducible defenses. Recently, the genome of Daphnia pulex, a model organism for defense studies, has been sequenced. Building on the genome information, recent preliminary studies in BMC Developmental Biology and BMC Molecular Biology have assessed gene response profiles in Daphnia under predation pressure. We review the significance of the findings and highlight future research perspectives

Colony-level differences in the scaling rules governing wood ant compound eye structure

Differential organ growth during development is essential for adults to maintain the correct proportions and achieve their characteristic shape. Organs scale with body size, a process known as allometry that has been studied extensively in a range of organisms. Such scaling rules, typically studied from a limited sample, are assumed to apply to all members of a population and/or species. Here we study scaling in the compound eyes of workers of the wood ant, Formica rufa, from different colonies within a single population. Workers' eye area increased with body size in all the colonies showing a negative allometry. However, both the slope and intercept of some allometric scaling relationships differed significantly among colonies. Moreover, though mean facet diameter and facet number increased with body size, some colonies primarily increased facet number whereas others increased facet diameter, showing that the cellular level processes underlying organ scaling differed among colonies. Thus, the rules that govern scaling at the organ and cellular levels can differ even within a single population

Does size matter for horny beetles? A geometric morphometric analysis of interspecific and intersexual size and shape variation in Colophon haughtoni Barnard, 1929, and C. kawaii Mizukami, 1997 (Coleoptera: Lucanidae)

Colophon is an understudied, rare and endangered stag beetle genus with all species endemic to isolated mountain peaks in South Africa’s Western Cape. Geometric morphometrics was used to analyse intersexual and interspecific variation of size and shape in the mandibles, heads, pronota and elytra of two sympatric species: Colophon haughtoni and Colophon kawaii. All measured structures showed significant sexual dimorphism, which may result from male-male competition for females. Female mandibles were too small and featureless for analysis, but male Colophon beetles possess large, ornate mandibles for fighting. Males had significantly larger heads and pronota that demonstrated shape changes which may relate to resource diversion to the mandibles and their supporting structures. Females are indistinguishable across species, but males were accurately identified using mandibles, heads and pronota. Male C. kawaii were significantly larger than C. haughtoni for all structures. These results support the species status of C. kawaii, which is currently in doubt due to its hybridisation with C. haughtoni. We also demonstrate the value of geometric morphometrics as a tool which may aid Colophon conservation by providing biological and phylogenetic insights and enabling species identification

Evolution of defence portfolios in exploiter-victim systems

Some organisms maintain a battery of defensive strategies against their exploiters (predators, parasites or parasitoids), while others fail to employ a defence that seems obvious. In this paper, we shall investigate the circumstances under which defence strategies might be expected to evolve. Brood parasites and their hosts provide our main motivation, and we shall discuss why the reed warbler Acrocephalus scirpaceus has evolved an egg-rejection but not a chick-rejection strategy as a defence against the common (Eurasian) cuckoo Cuculus canorus, while the superb fairy-wren Malurus cyaneus has evolved a chick-rejection but not an egg-rejection strategy as a defence against Horsfield's bronze-cuckoo Chrysococcyx basalis. We suggest that the answers lie in strategy-blocking, where one strategy (the blocking strategy) prevents the appearance of another (the blocked strategy) that would be adaptive in its absence. This may be common in exploiter-victim systems. © 2006 Springer Science+Business Media, Inc

Gene Network Analysis of Bone Marrow Mononuclear Cells Reveals Activation of Multiple Kinase Pathways in Human Systemic Lupus Erythematosus

Background: Gene profiling studies provide important information for key molecules relevant to a disease but are less informative of protein-protein interactions, post-translational modifications and regulation by targeted subcellular localization. Integration of genomic data and construction of functional gene networks may provide additional insights into complex diseases such as systemic lupus erythematosus (SLE). Methodology/Principal Findings: We analyzed gene expression microarray data of bone marrow mononuclear cells (BMMCs) from 20 SLE patients (11 with active disease) and 10 controls. Gene networks were constructed using the bioinformatic tool Ingenuity Gene Network Analysis. In SLE patients, comparative analysis of BMMCs genes revealed a network with 19 central nodes as major gene regulators including ERK, JNK, and p38 MAP kinases, insulin, Ca2+ and STAT3. Comparison between active versus inactive SLE identified 30 central nodes associated with immune response, protein synthesis, and post-transcriptional modification. A high degree of identity between networks in active SLE and non-Hodgkin's lymphoma (NHL) patients was found, with overlapping central nodes including kinases (MAPK, ERK, JNK, PKC), transcription factors (NF-kappaB, STAT3), and insulin. In validation studies, western blot analysis in splenic B cells from 5-month-old NZB/NZW F1 lupus mice showed activation of STAT3, ITGB2, HSPB1, ERK, JNK, p38, and p32 kinases, and downregulation of FOXO3 and VDR compared to normal C57Bl/6 mice. Conclusions/Significance: Gene network analysis of lupus BMMCs identified central gene regulators implicated in disease pathogenesis which could represent targets of novel therapies in human SLE. The high similarity between active SLE and NHL networks provides a molecular basis for the reported association of the former with lymphoid malignancies

Interpreting mismatches between linguistic and genetic patterns among speakers of Tanimuka (Eastern Tukanoan) and Yukuna (Arawakan)

Horizon 2020(H2020)818854Descriptive and Comparative Linguistic

A limited-size ensemble of homogeneous CNN/LSTMs for high-performance word classification

The strength of long short-term memory neural networks (LSTMs) that have been applied is more located in handling sequences of variable length than in handling geometric variability of the image patterns. In this paper, an end-to-end convolutional LSTM neural network is used to handle both geometric variation and sequence variability. The best results for LSTMs are often based on large-scale training of an ensemble of network instances. We show that high performances can be reached on a common benchmark set by using proper data augmentation for just five such networks using a proper coding scheme and a proper voting scheme. The networks have similar architectures (convolutional neural network (CNN): five layers, bidirectional LSTM (BiLSTM): three layers followed by a connectionist temporal classification (CTC) processing step). The approach assumes differently scaled input images and different feature map sizes. Three datasets are used: the standard benchmark RIMES dataset (French); a historical handwritten dataset KdK (Dutch); the standard benchmark George Washington (GW) dataset (English). Final performance obtained for the word-recognition test of RIMES was 96.6%, a clear improvement over other state-of-the-art approaches which did not use a pre-trained network. On the KdK and GW datasets, our approach also shows good results. The proposed approach is deployed in the Monk search engine for historical-handwriting collections