High-Resolution Structure of the N-Terminal Endonuclease Domain of the Lassa Virus L Polymerase in Complex with Magnesium Ions

Lassa virus (LASV) causes deadly hemorrhagic fever disease for which there are no vaccines and limited treatments. LASV-encoded L polymerase is required for viral RNA replication and transcription. The functional domains of L–a large protein of 2218 amino acid residues–are largely undefined, except for the centrally located RNA-dependent RNA polymerase (RdRP) motif. Recent structural and functional analyses of the N-terminal region of the L protein from lymphocytic choriomeningitis virus (LCMV), which is in the same Arenaviridae family as LASV, have identified an endonuclease domain that presumably cleaves the cap structures of host mRNAs in order to initiate viral transcription. Here we present a high-resolution crystal structure of the N-terminal 173-aa region of the LASV L protein (LASV L173) in complex with magnesium ions at 1.72 Å. The structure is highly homologous to other known viral endonucleases of arena- (LCMV NL1), orthomyxo- (influenza virus PA), and bunyaviruses (La Crosse virus NL1). Although the catalytic residues (D89, E102 and K122) are highly conserved among the known viral endonucleases, LASV L endonuclease structure shows some notable differences. Our data collected from in vitro endonuclease assays and a reporter-based LASV minigenome transcriptional assay in mammalian cells confirm structural prediction of LASV L173 as an active endonuclease. The high-resolution structure of the LASV L endonuclease domain in complex with magnesium ions should aid the development of antivirals against lethal Lassa hemorrhagic fever

New simplified analytical method for the Prediction of global stability of steel and composite sway frames

peer reviewedEurocode 4 is the European design code for composite construction; in its so-called EN 1994-1-1 version, the design of “non-sway buildings” is mainly covered. As a result, EC4 focuses on the check of structural elements like beams, columns, slabs and joints. However, in the last years, the construction of taller buildings and larger industrial halls without wind bracing systems tends to make global instability a relevant failure mode, which is not well covered by Eurocode 4. Recently, intensive experimental, numerical and theoretical investigations have been carried out at Liège University. The latter aimed at improving the knowledge in the field of sway composite building frames and at developing appropriate design rules. The rotational behavior of the beam-to-column composite joints is one of the key aspects of the problem to which a special attention has been paid. This paper reflects investigations carried out at Liege University on this topic. In particular, an innovative simplified analytical method to predict the ultimate loading factor and the associated collapse mode of both steel and composite frames subjected to static loadings is presented

Creation and suppression of point defects through a kick-out substitution process of Fe in InP

Indium antisite defect In P-related photoluminescence has been observed in Fe-diffused semi-insulating (SI) InP. Compared to annealed undoped or Fe-predoped SI InP, there are fewer defects in SI InP obtained by long-duration, high-temperature Fe diffusion. The suppression of the formation of point defects in Fe-diffused SI InP can be explained in terms of the complete occupation by Fe at indium vacancy. The In P defect is enhanced by the indium interstitial that is caused by the kick out of In and the substitution at the indium site of Fe in the diffusion process. Through these Fe-diffusion results, the nature of the defects in annealed undoped SI InP is better understood. © 2002 American Institute of Physics.published_or_final_versio

Effects of nutriental and environmental conditions on carotenoid biosynthesis by Rhodotorula sp.

Carotenoid compounds are popular natural antioxidants which are commonly isolated from the plants. Recently, there have been many researches on carotenoid biosynthesis towards low cost products. In this study, Rhodotorula sp. was grown on an agricultural byproduct (corncobs) as a matrix in solid-state fermentation. Essential nutrients were added with different concentrations to optimize condition for the carotenoid biosynthesis. Effects of other environmental factors such as moisture content and fermentation time on the yield were also characterized. The optimal nutrient composition for the yeast’s growth and carotenoid biosynthesis is a compound of 500μg nitrogen and 16mg carbon in 100g matrix. Additionally, the moisture content of 80% is the best for producing carotenoid by this yeast strain. The fermentation time for the highest carotenoid yield is observed after 8 days

STUDY ON THE EFFECT OF CALCIUM-ALGINATE AND WHEY PROTEIN ON THE SURVIVAL RATE OF Bifidobacterium bifidum IN MAYONNAISE

ABSTRACT – QMFS 2019The functional food development by adding probiotic bacteria is getting a lot of concern. In this study, Bifidobacterium bifidum AS 1.1886 was encapsulated in calcium-alginate 2% w/v (C sample) or the mix of calcium-alginate 2% (w/v) and whey protein 1% (w/v) (CW sample) or calcium-alginate 2% (w/v) coated by whey protein 1% (w/v) (CcW sample) by extrusion method, and added to mayonnaise product. The pH changes, the survival rate of probiotic bacteria, and total yeast and mold count during storage, as well as the probiotic survival in simulated gastric medium, were evaluated. The result showed that the pH changes were not significantly different in all mayonnaise samples in this test. The viability of the free probiotic cell was significant decrease about 5.85 log CFU/g compared to 0.26 ÷ 1.14 log CFU/g in encapsulated cell samples after four weeks of storage. None of the free cells survived after six weeks of storage. The total yeast and mold count in samples related to the probiotic count, the viability of probiotic cells higher 6 log CFU/g might be controlling the growth of yeast and molds in mayonnaise. Whey protein has been shown to significantly improve the survival rate of B.bifidum and calcium-alginate coated by whey protein, indicating the most effective protection. The result showed that the application potential of encapsulated probiotic in mayonnaise product

Wnt2 secreted by tumour fibroblasts promotes tumour progression in oesophageal cancer by activation of the Wnt/β-catenin signalling pathway

Objectives: Interaction between neoplastic and stromal cells plays an important role in tumour progression. It was recently found that WNT2 was frequently overexpressed in fibroblasts isolated from tumour tissue tumour fibroblasts (TF) compared with fibroblasts from non-tumour tissue normal fibroblasts in oesophageal squamous cell carcinoma (OSCC). This study aimed to investigate the effect of TF-secreted Wnt2 in OSCC development via the tumour - stroma interaction. Methods: Quantitative PCR, western blotting, immunohistochemistry and immunofluorescence were used to study the expression pattern of Wnt2 and its effect on the Wnt/β-catenin pathway. A Wnt2-secreting system was established in Chinese hamster ovary cells and its conditioned medium was used to study the role of Wnt2 in cell proliferation and invasion. Results: Expression of Wnt2 could only be detected in TF but not in OSCC cancer cell lines. In OSCC tissues, Wnt2 (+) cells were mainly detected in the boundary between stroma and tumour tissue or scattered within tumour tissue. In this study, Wnt2-positive OSCC was defined when five or more Wnt2(+) cells were observed in 2003X microscopy field. Interestingly, Wnt2-positive OSCC (22/51 cases) was significantly associated with lymph node metastases (p=0.001), advanced TNM stage (p=0.001) and disease-specific survival (p<0.0001). Functional study demonstrated that secreted Wnt2 could promote oesophageal cancer cell growth by activating the Wnt/β-catenin signalling pathway and subsequently upregulated cyclin D1 and c-myc expression. Further study found that Wnt2 could enhance cell motility and invasiveness by inducing epithelial-mesenchymal transition. Conclusions: TF-secreted Wnt2 acts as a growth and invasion-promoting factor through activating the canonical Wnt/β-catenin signalling pathway in oesophageal cancer cells.published_or_final_versio

INVESTIGATING THE EXPERIENCES OF STUDENTS WITH DISABILITIES WITH E-LEARNING DURING THE COVID-19 PANDEMIC IN VIETNAMESE HIGHER EDUCATION

This study uses a mixed-methods approach to investigate the experiences of Vietnamese university students with disabilities (visual/mobility impairments) with e-learning as a consequence of emergency remote teaching during the COVID-19 pandemic. An analysis of the ideas of 20 surveyed students with disabilities at eight universities in Ho Chi Minh City and six students interviewed afterward shows that students can change their study habits to adapt to e-learning and to enjoy this model of learning. However, the participants revealed that they also want to experience face-to-face learning so that they can interact with their lecturers and peers more effectively and in more diverse ways, as well as assimilate lectures more easily. Furthermore, the research shows that various adjustments should be made by system designers, universities, and lecturers to make e-learning friendlier to disabled students. The recommended adjustments include designing easy-to-use learning tools and platforms, providing lecturers with the necessary tools and facilities to design lessons appropriate for all students, providing psychological and technical support for disabled students, choosing user-friendly learning applications and platforms, providing students with suitable learning resources, and modifying testing and assessment methods

Effects of cardiomyopathy-linked mutations K15N and R21H in tropomyosin on thin-filament regulation and pointed-end dynamics

Missense mutations K15N and R21H in striated muscle tropomyosin are linked to dilated cardiomyopathy (DCM) and hypertrophic cardiomyopathy (HCM), respectively. Tropomyosin, together with the troponin complex, regulates muscle contraction and, along with tropomodulin and leiomodin, controls the uniform thin-filament lengths crucial for normal sarcomere structure and function. We used Förster resonance energy transfer to study effects of the tropomyosin mutations on the structure and kinetics of the cardiac troponin core domain associated with the Ca2+-dependent regulation of cardiac thin filaments. We found that the K15N mutation desensitizes thin filaments to Ca2+ and slows the kinetics of structural changes in troponin induced by Ca2+ dissociation from troponin, while the R21H mutation has almost no effect on these parameters. Expression of the K15N mutant in cardiomyocytes decreases leiomodin’s thin-filament pointed-end assembly but does not affect tropomodulin’s assembly at the pointed end. Our in vitro assays show that the R21H mutation causes a twofold decrease in tropomyosin’s affinity for F-actin and affects leiomodin’s function. We suggest that the K15N mutation causes DCM by altering Ca2+-dependent thin-filament regulation and that one of the possible HCM-causing mechanisms by the R21H mutation is through alteration of leiomodin’s function

Global proteomics analysis of the response to starvation in <i>C. elegans</i>

Periodic starvation of animals induces large shifts in metabolism but may also influence many other cellular systems and can lead to adaption to prolonged starvation conditions. To date, there is limited understanding of how starvation affects gene expression, particularly at the protein level. Here, we have used mass-spectrometry-based quantitative proteomics to identify global changes in the Caenorhabditis elegans proteome due to acute starvation of young adult animals. Measuring changes in the abundance of over 5,000 proteins, we show that acute starvation rapidly alters the levels of hundreds of proteins, many involved in central metabolic pathways, highlighting key regulatory responses. Surprisingly, we also detect changes in the abundance of chromatin-associated proteins, including specific linker histones, histone variants, and histone posttranslational modifications associated with the epigenetic control of gene expression. To maximize community access to these data, they are presented in an online searchable database, the Encyclopedia of Proteome Dynamics (http://www.peptracker.com/epd/)

Synthesis and photocatalytic property of Prussian blue/g-C3N4 composite applied to degradation of rhodamine B under visible light

In this work, the Prussian blue/g-C3N4 (PB/g-C3N4) composite was synthesized from Prussian blue and g-C3N4 via a simple method. The composite was characterized by using X-ray diffraction, Fourier-transform infrared spectroscopy, and ultraviolet-visible diffuse reflectance spectroscopy. The material’s photocatalytic performance was studied via the degradation of rhodamine B (RhB). The results show that the composite degraded RhB more than pristine Prussian blue under visible light after 60 min. This material is promising for organic waste treatment