Observational Constraints on Supernova Progenitors

In the last decade, time-domain surveys have dramatically enhanced our understanding of stellar evolutionary pathways by providing accurate measurements of the physical parameters of many stars. Despite these advancements, significant gaps remain in our understanding of how massive stars conclude their life cycles and the details of their final evolutionary stages. For instance, what experiences do red supergiants undergo in the months to years before their explosions? What are the origins of the pre-explosion outbursts in interaction-powered supernovae, and how can these inform our understanding of their progenitors? Can Type Ia supernovae result from helium-shell detonations? Is there a continuum among stripped-envelope supernovae?In this dissertation, I will present progress on these topics through studies of five supernovae, including SN~2018cuf, SN~2023ixf, SN~2016dsg, SN~2022crv, and SN~2023fyq. Utilizing well-sampled photometric and spectroscopic data, alongside detailed hydrodynamic modeling, I have placed strong constraints on the progenitors of these supernovae. Remarkably, my findings suggest multiple mechanisms may be responsible for the dense circumstellar materials around Type II supernovae; some peculiar thermonuclear supernovae likely originate from thick helium-shell detonations; there is indeed a continuum between Type IIb and Type Ib supernovae; and a promising progenitor channel for Type Ibn supernovae involves a binary system with a compact object companion, capable of producing long-standing, bright pre-explosion emissions

Study on preparation and characteristics of CMC/ZrCit/GDL fire-fighting gel foam

In order to prevent coal spontaneous combustion, a new kind of gel foam was prepared with sodium carboxymethyl cellulose (CMC), zirconium citrate (ZrCit), gluconate-δ-lactone (GDL) and compound foaming agent in a certain proportion. The basic performance tests of thermal stability, permeability and adhesion of the prepared gel foam were carried out respectively. TG experiment was used to study the influence of the coal sample treated with gel foam on the mass and heat of the coal sample compared with the raw coal sample during the heating process. Through the change of the concentration of the indicator gas CO of coal spontaneous combustion in the programmed temperature experiment, The retarding property of gel foam was investigated and the flame retardant mechanism of gel foam was analyzed based on the experimental results. The experimental study shows that the gel foam with high price Zr4+ as metal crosslinking agent has stable structure, can significantly enhance the thermal stability and water retention of the gel foam, make the coal oxidation heat loss significantly reduced in TG analysis, the maximum heat release power decreased by 19.9%, make the coal oxygen composite oxygen consumption rate and CO production rate decreased in the temperature program experiment, indicating that the gel foam can Coal spontaneous combustion can be effectively inhibited by physical and chemical reactions

Identifying the SN 2022acko progenitor with JWST

We report on analysis using the James Webb Space Telescope (JWST) to identify a candidate progenitor star of the Type II-plateau supernova SN 2022acko in the nearby, barred spiral galaxy NGC 1300. To our knowledge, our discovery represents the first time JWST has been used to localize a progenitor system in pre-explosion archival Hubble Space Telescope (HST) images. We astrometrically registered a JWST NIRCam image from 2023 January, in which the SN was serendipitously captured, to pre-SN HST F160W and F814W images from 2017 and 2004, respectively. An object corresponding precisely to the SN position has been isolated with reasonable confidence. That object has a spectral energy distribution (SED) and overall luminosity consistent with a single-star model having an initial mass possibly somewhat less than the canonical 8 Msun theoretical threshold for core collapse (although masses as high as 9 Msun for the star are also possible); however, the star's SED and luminosity are inconsistent with that of a super-asymptotic giant branch star which might be a forerunner of an electron-capture SN. The properties of the progenitor alone imply that SN 2022acko is a relatively normal SN II-P, albeit most likely a low-luminosity one. The progenitor candidate should be confirmed with follow-up HST imaging at late times, when the SN has sufficiently faded. This potential use of JWST opens a new era of identifying SN progenitor candidates at high spatial resolution.Comment: 8 pages, substantial changes from v1, to appear in MNRA

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) curated consensus somatic mutation calls using whole exome sequencing (WES) and whole genome sequencing (WGS), respectively. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which aggregated whole genome sequencing data from 2,658 cancers across 38 tumour types, we compare WES and WGS side-by-side from 746 TCGA samples, finding that ~80% of mutations overlap in covered exonic regions. We estimate that low variant allele fraction (VAF < 15%) and clonal heterogeneity contribute up to 68% of private WGS mutations and 71% of private WES mutations. We observe that ~30% of private WGS mutations trace to mutations identified by a single variant caller in WES consensus efforts. WGS captures both ~50% more variation in exonic regions and un-observed mutations in loci with variable GC-content. Together, our analysis highlights technological divergences between two reproducible somatic variant detection efforts

SN 2022jox: An extraordinarily ordinary Type II SN with Flash Spectroscopy

We present high cadence optical and ultraviolet observations of the Type II supernova (SN), SN 2022jox which exhibits early spectroscopic high ionization flash features of \ion{H}{1}, \ion{He}{2}, \ion{C}{4}, and \ion{N}{4} that disappear within the first few days after explosion. SN 2022jox was discovered by the Distance Less than 40 Mpc (DLT40) survey $\sim$0.75 days after explosion with followup spectra and UV photometry obtained within minutes of discovery. The SN reached a peak brightness of M$_V \sim$ $-$17.3 mag, and has an estimated $^{56}$Ni mass of 0.04 M$_{\odot}$, typical values for normal Type II SNe. The modeling of the early lightcurve and the strong flash signatures present in the optical spectra indicate interaction with circumstellar material (CSM) created from a progenitor with a mass loss rate of $\dot{M} \sim 10^{-3}-10^{-2}\ M_\odot\ \mathrm{yr}^{-1}$. There may also be some indication of late-time CSM interaction in the form of an emission line blueward of H$\alpha$ seen in spectra around 200 days. The mass-loss rate is much higher than the values typically associated with quiescent mass loss from red supergiants, the known progenitors of Type II SNe, but is comparable to inferred values from similar core collapse SNe with flash features, suggesting an eruptive event or a superwind in the progenitor in the months or years before explosion.Comment: Submitted to Ap

Circumstellar Medium Interaction in SN 2018lab, A Low-Luminosity II-P Supernova observed with TESS

We present photometric and spectroscopic data of SN 2018lab, a low luminosity type IIP supernova (LLSN) with a V-band peak luminosity of $-15.1\pm0.1$ mag. SN 2018lab was discovered by the Distance Less Than 40 Mpc (DLT40) SNe survey only 0.73 days post-explosion, as determined by observations from the Transiting Exoplanet Survey Satellite (TESS). TESS observations of SN 2018lab yield a densely sampled, fast-rising, early time light curve likely powered by circumstellar medium (CSM) interaction. The blue-shifted, broadened flash feature in the earliest spectra ($<$2 days) of SN 2018lab provide further evidence for ejecta-CSM interaction. The early emission features in the spectra of SN 2018lab are well described by models of a red supergiant progenitor with an extended envelope and close-in CSM. As one of the few LLSNe with observed flash features, SN 2018lab highlights the need for more early spectra to explain the diversity of flash feature morphology in type II SNe

Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

Correction to this paper has been published: https://doi.org/10.1038/s41467-020-20128-w

Author Correction:Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)

The original version of this Article omitted from the author list the 9th author Yize Li, who is from the ‘The McDonnell Genome Institute at Washington University, St. Louis, MO 63108, USA and Department of Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, MO 63108, USA’. This has been corrected in both the PDF and HTML versions of the Article

Causal effects of immune cell surface antigens and functional outcome after ischemic stroke: a Mendelian randomization study

ObjectiveWhile observational studies link immune cells with post-stroke functional outcome, the underlying immune mechanisms are not well understood. Immune cell surface antigens are actively involved in the biological behavior of immune cells, investigating immune cell surface antigens could deepen our comprehension of their role and biological processes in stroke recovery. Therefore, we aimed to investigate the immunological basis of stroke outcome by exploring the causal relationship between immune cell surface antigens and functional outcome after ischemic stroke in a Mendelian randomization study.MethodsGenetic variants related to immune cell surface antigens and post-stroke functional outcome were selected for two-sample Mendelian randomization (MR) analysis. 389 fluorescence intensities (MFIs) with surface antigens were included. Inverse variance weighted (IVW) modeling was used as the primary MR method to estimate the causal effect of exposure on the outcome, followed by several alternative methods and sensitivity analyses. Additional analysis of the association between immune cell surface antigens and risk of ischemic stroke for assessment of collider bias.ResultsWe found that suggestive associations between CD20 on switched memory B cell (OR = 1.16, 95% CI: 1.01-1.34, p = 0.036) and PDL-1 on monocyte (OR = 1.32, 95% CI: 1.04-1.66, p = 0.022) and poor post-stroke functional outcome, whereas CD25 on CD39+ resting Treg (OR = 0.77, 95% CI: 0.62-0.96, p = 0.017) was suggestively associated with good post-stroke functional outcome.ConclusionThe elevated CD20 on switched memory B cell, PDL-1 on monocyte, and CD25 on CD39+ resting Treg may be novel biomarkers and potential causal factors influencing post-stroke functional outcome

Shock Cooling and Possible Precursor Emission in the Early Light Curve of the Type II SN 2023ixf

We present the densely sampled early light curve of the Type II supernova (SN) 2023ixf, first observed within hours of explosion in the nearby Pinwheel Galaxy (Messier 101; 6.7 Mpc). Comparing these data to recently updated models of shock cooling emission, we find that the progenitor likely had a radius of $410 \pm 10\ R_\odot$ (statistical uncertainty only), consistent with a red supergiant. These models provide a good fit to the data starting about 1 day after the explosion, despite the fact that the classification spectrum shows signatures of circumstellar material around SN 2023ixf during that time. Photometry during the first day after the explosion, provided almost entirely by amateur astronomers, does not agree with the shock cooling models or a simple power-law rise fit to data after 1 day. We consider the possible causes of this discrepancy, including precursor activity from the progenitor star, circumstellar interaction, and emission from the shock before or after it breaks out of the stellar surface. The very low luminosity ($-11\mathrm{\ mag} > M > -14\mathrm{\ mag}$) and short duration of the initial excess leads us to prefer a scenario related to prolonged emission from the SN shock traveling through the progenitor system.Comment: submitted to ApJ