Determination of mean surface position and sea state from the radar return of a short-pulse satellite altimeter

Using the specular point theory of scatter from a very rough surface, the average backscatter cross section per unit area per radar cell width is derived for a cell located at a given height above the mean sea surface. This result is then applied to predict the average radar cross section observed by a short-pulse altimeter as a function of time for two modes of operation: pulse-limited and beam-limited configurations. For a pulse-limited satellite altimeter, a family of curves is calculated showing the distortion of the leading edge of the receiver output signal as a function of sea state (i.e., wind speed). A signal processing scheme is discussed that permits an accurate determination of the mean surface position--even in high seas--and, as a by-product, the estimation of the significant seawave height (or wind speed above the surface). Comparison of these analytical results with experimental data for both pulse-limited and beam-limited operation lends credence to the model. Such a model should aid in the design of short-pulse altimeters for accurate determination of the geoid over the oceans, as well as for the use of such altimeters for orbital sea-state monitoring

Determination of RMS height of a rough surface using radar waves

Root mean square height of rough surface determined by measuring correlation between two scattered radar waves at different frequencies as function of frequency separatio

Gating characteristics of photomultiplier tubes for Lidar applications

A detector test facility was developed and applied in the evaluation and characterization of lidar detectors in support of the multipurpose airborne differential absorption lidar (DIAL) system based at the Langley Research Center (LaRC). A performance data base of various detector configurations available to the DIAL system was obtained for optimum lidar detector selection. Photomultiplier tubes (PMT's) with multialkaline and bialkaline photocathodes were evaluated in voltage-divider networks (bases) by using either the focusing electrode or dynodes as a gating mechanism. Characteristics used for detector evaluation included gain stability, signal rise time, and the ability to block unwanted high light levels

Scattering from surfaces with different roughness scales, analysis and interpretation

Statistical analysis and physical interpretation of scattering from surfaces with different roughness scale

Crosslinking of aromatic polyamides via pendant propargyl groups

Methods for crosslinking N-methyl substituted aromatic polyamides were investigated in an effort to improve the applicability of these polymers as matrix resins for Kavlar trademark fiber composites. High molecular weight polymers were prepared from isophthaloyl dichloride and 4,4'- bis(methylamino)diphenylmethane with varying proportions of the N,N'bispropargyl diamine incorporated as a crosslinking agent. The propargylcontaining diamines were crosslinked thermally and characterized by infrared spectroscopy, differential scanning calorimetry, and thermogravimetric analysis. Attempts were also made to crosslink polyamide films by exposure to ultraviolet light, electron beam, and gamma radiation

Horizontal wavenumber spectra of winds, temperature, and trace gases during the Pacific Exploratory Missions: 2. Gravity waves, quasi-two-dimensional turbulence, and vortical modes

We examine the horizontal wavenumber spectra of horizontal velocity and potential temperature collected by aircraft above the Pacific Ocean to determine whether gravity waves, quasi-two-dimensional (Q-2-D) turbulence, or vortical modes dominate atmospheric fluctuations at scale sizes of 1–100 km and altitudes of 2–12 km. We conclude from the study of Doppler-shifting effects that Q-2-D turbulence and/or vortical modes are more prevalent than gravity waves over the ocean, except in the equatorial zone. The results are consistent with recent numerical simulations of Q-2-D turbulence, which show that the characteristic inverse cascade of energy is greatly facilitated by the presence of background rotation. Furthermore, a Stokes-parameter analysis reveals the general paucity of coherent wavelike motions, although specific cases of gravity-wave propagation are observed. Finally, a case study of a long flight segment displays a k⁻³ horizontal velocity variance spectrum at scales longer than about 100 km. A Stokes-parameter analysis indicates that these large-scale fluctuations were likely due to vortical modes rather than inertio-gravity waves.United States. National Aeronautics and Space Administration (Grant NAG1-1758)United States. National Aeronautics and Space Administration (Grant NAG1-1901

Identifying Structural Variation in Haploid Microbial Genomes from Short-Read Resequencing Data Using Breseq

Mutations that alter chromosomal structure play critical roles in evolution and disease, including in the origin of new lifestyles and pathogenic traits in microbes. Large-scale rearrangements in genomes are often mediated by recombination events involving new or existing copies of mobile genetic elements, recently duplicated genes, or other repetitive sequences. Most current software programs for predicting structural variation from short-read DNA resequencing data are intended primarily for use on human genomes. They typically disregard information in reads mapping to repeat sequences, and significant post-processing and manual examination of their output is often required to rule out false-positive predictions and precisely describe mutational events. Results: We have implemented an algorithm for identifying structural variation from DNA resequencing data as part of the breseq computational pipeline for predicting mutations in haploid microbial genomes. Our method evaluates the support for new sequence junctions present in a clonal sample from split-read alignments to a reference genome, including matches to repeat sequences. Then, it uses a statistical model of read coverage evenness to accept or reject these predictions. Finally, breseq combines predictions of new junctions and deleted chromosomal regions to output biologically relevant descriptions of mutations and their effects on genes. We demonstrate the performance of breseq on simulated Escherichia coli genomes with deletions generating unique breakpoint sequences, new insertions of mobile genetic elements, and deletions mediated by mobile elements. Then, we reanalyze data from an E. coli K-12 mutation accumulation evolution experiment in which structural variation was not previously identified. Transposon insertions and large-scale chromosomal changes detected by breseq account for similar to 25% of spontaneous mutations in this strain. In all cases, we find that breseq is able to reliably predict structural variation with modest read-depth coverage of the reference genome (>40-fold). Conclusions: Using breseq to predict structural variation should be useful for studies of microbial epidemiology, experimental evolution, synthetic biology, and genetics when a reference genome for a closely related strain is available. In these cases, breseq can discover mutations that may be responsible for important or unintended changes in genomes that might otherwise go undetected.U.S. National Institutes of Health R00-GM087550U.S. National Science Foundation (NSF) DEB-0515729NSF BEACON Center for the Study of Evolution in Action DBI-0939454Cancer Prevention & Research Institute of Texas (CPRIT) RP130124University of Texas at Austin startup fundsUniversity of Texas at AustinCPRIT Cancer Research TraineeshipMolecular Bioscience

Summertime distribution and relations of reactive odd nitrogen species and NOyin the troposphere over Canada

We report here large-scale features of the distribution of NOx, HNO3, PAN, particle (NO3) (-) and NOy in the troposphere from 0.15 to 6 km altitude over central Canada. These measurements were conducted in July-August 1990 from the NASA Wallops Electra aircraft as part of the joint United States-Canadian Arctic Boundary Layer Expedition (ABLE) 3B-Northern Wetlands Study. Our findings show that this region is generally NOx limited, with NOx mixing ratios typically 20-30 parts per trillion by volume (pptv). We found little direct evidence for anthropogenic enhancement of mixing ratios of reactive odd nitrogen species and NOy above those in "background" air. Instead, it appears that enhancements in the mixing ratios of these species were primarily due to emissions from several day old or CO -rich -NOx-poor smoldering local biomass-burning fires. NOx mixing ratios in biomass-burning impacted air masses were usually <50 pptv, but those of HNO3 and PAN were typically 100-300 pptv representin g a twofold-threefold enhancement over "background" air. During our study period, inputs of what appeared to be aged tropical air were a major factor influencing the distribution of reactive odd nitrogen in the midtroposphere over northeastern North America. These air masses were quite depleted in NOy (generally <150 pptv), and a frequent summertime occurrence of such air masses over this region would imply a significant influence on the reactive odd nitrogen budget. Our findings show that the chemical composition of aged air masses over subarctic Canada and those documented in the Arctic during ABLE 3A have strikingly similar chemistries, suggesting large-scale connection between the air masses influencing these regions

Assessment of upper tropospheric HOx sources over the tropical Pacific based on NASA GTE/PEM data: Net effect on HOx and other photochemical parameters

Data for the tropical upper troposphere (8-12 km, 20° N-20° S) collected during NASA's Pacific Exploratory Missions have been used to carry out a detailed examination of the photochemical processes controlling HOx (OH+HO2). Of particular significance is the availability of measurements of nonmethane hydrocarbons, oxygenated hydrocarbons (i.e., acetone, methanol, and ethanol) and peroxides (i.e., H2O2 and CH3OOH). These observations have provided constraints on model calculations permitting an assessment of the potential impact of these species on the levels of HOx, CH3O2, CH2O, as well as ozone budget parameters. Sensitivity calculations using a time-dependent photochemical box model show that when constrained by measured values of the above oxygenated species, model estimated HOx levels are elevated relative to unconstrained calculations. The impact of constraining these species was found to increase with altitude, reflecting the systematic roll-off in water vapor mixing ratios with altitude. At 11-12 km, overall increases in HOx approached a factor of 2 with somewhat larger increases being found for gross and net photochemical production of ozone. While significant, the impact on HOx due to peroxides appears to be less than previously estimated. In particular, observations of elevated H2O2 levels may be more influenced by local photochemistry than by convective transport. Issues related to the uncertainty in high-altitude water vapor levels and the possibility of other contributing sources of HOx are discussed. Finally, it is noted that the uncertainties in gas kinetic rate coefficients at the low temperatures of the upper troposphere and as well as OH sensor calibrations should be areas of continued investigation. Copyright 1999 by the American Geophysical Union