912 research outputs found
Unusual onset of a case of chronic recurrent multifocal osteomyelitis
Background: Chronic recurrent multifocal osteomyelitis (CRMO) is a rare condition that commonly affects the clavicle and pelvis. Case presentation: We report here a case a 12 years old girl with CRMO arising with recurrent episodes of left supraorbital headache, followed by the appearance of a periorbital dyschromia. Magnetic resonance imaging (MRI) of the skull and orbits revealed an important subacute inflammatory process. Few months after, the child presented a painful swelling of the left clavicle; the histological examination of the related biopsy allowed to establish the diagnosis of CRMO. Conclusion: CRMO presenting as acute headache involving neurocranium is rare; to our knowledge this is the first recognized case in the world literature. This pathological condition is frequently misdiagnosed as infection or neoplasm and needs a deep investigation for the differential diagnosis. The physical, laboratoristic and instrumental diagnostic investigations of the patient and the treatment employed are described in detail
Trace samples of human blood in mosquitoes as a forensic investigation tool
Investigations of any type of crime invariably starts at the crime scene by collecting evidence. Thus, the purpose of this research was to collect and analyze an entomological trace from an environment that is similar to those of indoor crime scenes. Hematophagous mosquitoes were collected from two residential units; saliva of volunteers that were residents in the units was also collected for genetic analysis as reference samples. We examined the allele frequencies of 15 short tandem repeat loci (D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818, and FGA) and amelogenin. A total of 26 female hematophagous mosquitoes were identified as Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus; we were able to obtain 11 forensically valid genetic profiles, with a minimum of 0.028203 ng/\u3bcL of human DNA. Thus, the results of this study showed that it was possible to correlate human genetic information from mosquitoes with the volunteer reference samples, which validates the use of this information as forensic evidence. Furthermore, we observed mixed genetic profiles from one mosquito. Therefore, it is clearly important to collect these insects indoors where crimes were committed, because it may be possible to find intact genetic profiles of suspects in the blood found in the digestive tract of hematophagous mosquitoes for later comparison to identify an offender and/or exclude suspects
A rapid screening of ancestry for genetic association studies in an admixed population from Pernambuco, Brazil
Genetic association studies determine how genes influence traits. However, non-detected population substructure may bias the analysis, resulting in spurious results. One method to detect substructure is to genotype ancestry informative markers (AIMs) besides the candidate variants, quantifying how much ancestral populations contribute to the samples' genetic background. The present study aimed to use a minimum quantity of markers, while retaining full potential to estimate ancestries. We tested the feasibility of a subset of the 12 most informative markers from a previously established study to estimate influence from three ancestral populations: European, African and Amerindian. The results showed that in a sample with a diverse ethnicity (N = 822) derived from 1000 Genomes database, the 12 AIMs had the same capacity to estimate ancestries when compared to the original set of 128 AIMs, since estimates from the two panels were closely correlated. Thus, these 12 SNPs were used to estimate ancestry in a new sample (N = 192) from an admixed population in Recife, Northeast Brazil. The ancestry estimates from Recife subjects were in accordance with previous studies, showing that Northeastern Brazilian populations show great influence from European ancestry (59.7%), followed by African (23.0%) and Amerindian (17.3%) ancestries. Ethnicity self-classification according to skin-color was confirmed to be a poor indicator of population substructure in Brazilians, since ancestry estimates overlapped between classifications. Thus, our streamlined panel of 12 markers may substitute panels with more markers, while retaining the capacity to control for population substructure and admixture, thereby reducing sample processing time
Heuristic Segmentation of a Nonstationary Time Series
Many phenomena, both natural and human-influenced, give rise to signals whose
statistical properties change under time translation, i.e., are nonstationary.
For some practical purposes, a nonstationary time series can be seen as a
concatenation of stationary segments. Using a segmentation algorithm, it has
been reported that for heart beat data and Internet traffic fluctuations--the
distribution of durations of these stationary segments decays with a power law
tail. A potential technical difficulty that has not been thoroughly
investigated is that a nonstationary time series with a (scale-free) power law
distribution of stationary segments is harder to segment than other
nonstationary time series because of the wider range of possible segment sizes.
Here, we investigate the validity of a heuristic segmentation algorithm
recently proposed by Bernaola-Galvan et al. by systematically analyzing
surrogate time series with different statistical properties. We find that if a
given nonstationary time series has stationary periods whose size is
distributed as a power law, the algorithm can split the time series into a set
of stationary segments with the correct statistical properties. We also find
that the estimated power law exponent of the distribution of stationary-segment
sizes is affected by (i) the minimum segment size, and (ii) the ratio of the
standard deviation of the mean values of the segments, and the standard
deviation of the fluctuations within a segment. Furthermore, we determine that
the performance of the algorithm is generally not affected by uncorrelated
noise spikes or by weak long-range temporal correlations of the fluctuations
within segments.Comment: 23 pages, 14 figure
The effects of spatial constraints on the evolution of weighted complex networks
Motivated by the empirical analysis of the air transportation system, we
define a network model that includes geographical attributes along with
topological and weight (traffic) properties. The introduction of geographical
attributes is made by constraining the network in real space. Interestingly,
the inclusion of geometrical features induces non-trivial correlations between
the weights, the connectivity pattern and the actual spatial distances of
vertices. The model also recovers the emergence of anomalous fluctuations in
the betweenness-degree correlation function as first observed by Guimer\`a and
Amaral [Eur. Phys. J. B {\bf 38}, 381 (2004)]. The presented results suggest
that the interplay between weight dynamics and spatial constraints is a key
ingredient in order to understand the formation of real-world weighted
networks
Large Scale Cross-Correlations in Internet Traffic
The Internet is a complex network of interconnected routers and the existence
of collective behavior such as congestion suggests that the correlations
between different connections play a crucial role. It is thus critical to
measure and quantify these correlations. We use methods of random matrix theory
(RMT) to analyze the cross-correlation matrix C of information flow changes of
650 connections between 26 routers of the French scientific network `Renater'.
We find that C has the universal properties of the Gaussian orthogonal ensemble
of random matrices: The distribution of eigenvalues--up to a rescaling which
exhibits a typical correlation time of the order 10 minutes--and the spacing
distribution follow the predictions of RMT. There are some deviations for large
eigenvalues which contain network-specific information and which identify
genuine correlations between connections. The study of the most correlated
connections reveals the existence of `active centers' which are exchanging
information with a large number of routers thereby inducing correlations
between the corresponding connections. These strong correlations could be a
reason for the observed self-similarity in the WWW traffic.Comment: 7 pages, 6 figures, final versio
Statistical mechanics of complex networks
Complex networks describe a wide range of systems in nature and society, much
quoted examples including the cell, a network of chemicals linked by chemical
reactions, or the Internet, a network of routers and computers connected by
physical links. While traditionally these systems were modeled as random
graphs, it is increasingly recognized that the topology and evolution of real
networks is governed by robust organizing principles. Here we review the recent
advances in the field of complex networks, focusing on the statistical
mechanics of network topology and dynamics. After reviewing the empirical data
that motivated the recent interest in networks, we discuss the main models and
analytical tools, covering random graphs, small-world and scale-free networks,
as well as the interplay between topology and the network's robustness against
failures and attacks.Comment: 54 pages, submitted to Reviews of Modern Physic
Estimation of traffic matrices for LRD traffic
The estimation of traffic matrices in a communications network on the basis of a set of traffic measurements on the network links is a well known problem, for which a number of solutions have been proposed when the traffic does not show dependence over time, as in the case of the Poisson process. However, extensive measurements campaigns conducted on IP networks have shown that the traffic exhibits long range dependence. Here two methods are proposed for the estimation of traffic matrices in the case of long range dependence, their asymptotic properties are studied, and their relative merits are compared
HIV-1 mother-to-child transmission in Brazil (1994\u20132016): a time series modeling
HIV-1 mother-to-child transmission (HIV-1 MTCT), is an important cause of children mortality worldwide. Brazil has been traditionally praised by its HIV/Aids program, which provides free-of-charge care for people living with HIV-1. Using public epidemiology and demographic databases, we aimed at modeling HIV-1 MTCT prevalence in Brazil through the years (1994\u20132016) and elaborate a statistical model for forecasting, contributing to HIV-1 epidemiologic surveillance and healthcare decision-making. We downloaded sets of live births and mothers\u2019 data alongside HIV-1 cases notification in children one year old or less. Through time series modeling, we estimated prevalence along the years in Brazil, and observed a remarkable decrease of HIV-1 MTCT between 1994 (10 cases per 100,000 live births) and 2016 (five cases per 100,000 live births), a reduction of 50%. Using our model, we elaborated a prognosis for each Brazilian state to help HIV-1 surveillance decision making, indicating which states are in theory in risk of experiencing a rise in HIV-1 MTCT prevalence. Ten states had good (37%), nine had mild (33%), and eight had poor prognostics (30%). Stratifying the prognostics by Brazilian region, we observed that the Northeast region had more states with poor prognosis, followed by North and Midwest, Southeast and South with one state of poor prognosis each. Brazil undoubtedly advanced in the fight against HIV-1 MTCT in the past two decades. We hope our model will help indicating where HIV-1 MTCT prevalence may rise in the future and support government decision makers regarding HIV-1 surveillance and prevention
Antiretroviral therapy immunologic non-response in a Brazilian population: association study using pharmaco- and immunogenetic markers
BACKGROUND:
Antiretroviral therapy (ART) saved millions from HIV-1 infection and AIDS, but some patients do not experience adequate CD4+ T cells gain despite achieving viral suppression. The genetic component of this condition is not yet completely elucidated.
OBJECTIVE:
To identify predictive genetic markers of immune response to ART.
METHODS:
Case-control study. Out of 176 HIV-infected patients recruited in the city of Recife, Northeast Brazil, 67 patients with no immunologic response were the cases and the remaining 109 patients who responded were the controls. A set of 94 selected single nucleotide polymorphisms (SNPs) involved in antiretroviral drugs pharmacodynamic pathways and immune system homeostasis were genotyped, while the remaining 48 were ancestry informative markers (AIMs) for controlling for eventual hidden population structure.
RESULTS:
Male patients were overrepresented in non-responder group (p=0.01). Non-responders also started with lower absolute CD4+ T cell counts (p<0.001). We found five SNPs significantly associated with the outcome, being three more frequent in non-responders than responders: rs2243250 (IL4) A allele (p=0.04), rs1128503 (ABCB1) A allele (p=0.03) and rs707265 (CYP2B6) A allele (p=0.02), whereas the other two were less frequent in non-responders: rs2069762 (IL2) C allele (p=0.004) and rs4646437 (CYP3A4) A allele (p=0.04).
CONCLUSION:
Some significant univariate associations remained independently associated at multivariate survival analysis modeling, such as pre-treatment CD4+ T cells counts, IL2 and ABCB1 genotypes, and use of protease inhibitors, yielding a predictive model for the probability for immune response. More studies are needed to unravel the genetic basis of ART immunological non-response
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