3D RECONSTRUCTION USING MULTI-VIEW IMAGING SYSTEM

This thesis presents a new system that reconstructs the 3D representation of dental casts. To maintain the integrity of the 3D representation, a standard model is built to cover the blind spots that the camera cannot reach. The standard model is obtained by scanning a real human mouth model with a laser scanner. Then the model is simplified by an algorithm which is based on iterative contraction of vertex pairs. The simplified standard model uses a local parametrization method to obtain the curvature information. The system uses a digital camera and a square tube mirror in front of the camera to capture multi-view images. The mirror is made of stainless steel in order to avoid double reflections. The reflected areas of the image are considered as images taken by the virtual cameras. Only one camera calibration is needed since the virtual cameras have the same intrinsic parameters as the real camera. Depth is computed by a simple and accurate geometry based method once the corresponding points are identified. Correspondences are selected using a feature point based stereo matching process, including fast normalized cross-correlation and simulated annealing

Insecticidal Activity of the Soil in the Rhizosphere of Viburnum odoratissimum against Solenopsis invicta (Hymenoptera: Formicidae)

Methyl salicylate produced by Viburnum odoratissimum is known to exert lethal or sublethal effects on insects. Replacing conventional pesticides with insecticidal plants is necessary for environmental protection. We evaluated the behavioral and toxicological responses of the red imported fire ant (RIFA Solenopsis invicta)( Hymenopter: Buren Formicidae) at different soil depths in the rhizosphere of V. odoratissimum. Results of insecticidal activity bioassays indicated that the mortality for minor and major ants in soil at depths of 0-10 cm at days 11 and 12 both ranged from 68.75% to 100.00%, with repellent rates of 83.54%–100.00% and 85.31%–100.00%, respectively. In behavioral ability tests, 85.45%–100.00% of minor ants and 86.74%–94.85% of major ants lost their ability to grasp after nine days, with crawl rates at only 0.00%–29.25% and 0.00%–55.77%, respectively. Therefore, we conclude from the result that the soil under V. odoratissimum at depths of 0-10 cm exhibited excellent insecticidal effect in controlling RIFA.Methyl salicylate produced by Viburnum odoratissimum is known to exert lethal or sublethal effects on insects. Replacing conventional pesticides with insecticidal plants is necessary for environmental protection. We evaluated the behavioral and toxicological responses of the red imported fire ant (RIFA Solenopsis invicta, Buren) (Hymenoptera: Formicidae) at different soil depths in the rhizosphere of V. odoratissimum. Results of insecticidal activity bioassays indicated that the mortality for minor and major ants in soil at depths of 0-10 cm at days 11 and 12 both ranged from 68.75% to 100.00%, with repellency rates of 83.54%-100.00% and 85.31%-100.00%, respectively. In behavioral ability tests, 85.45%-100.00% of minor ants and 86.74%-94.85% of major ants lost their ability to grasp after nine days, with crawling rates at only 0.00%-29.25% and 0.00%-55.77%, respectively. Therefore, we conclude from the result that the soil under V. odoratissimum at depths of 0-10 cm exhibited excellent insecticidal effect in controlling RIFA

Polyploidy levels of Chinese large-flower chrysanthemum determined by flow cytometry

Flow cytometry was used to determine the ploidy level of 405 Chinese large-flower chrysanthemum (Chrysanthemum morifolium Ramat.) cultivars. Sixty-three cultivars are triploid, 175 cultivars tetraploid, 32 cultivars pentaploid, 46 cultivars hexaploid and 1 cultivar heptaploid. Forty-eight cultivars were then randomly selected for confirmation by chromosome-counting; the results are in agreement with the classification of ploidy level by flow cytometry. Most cultivars are aneuploid. The high percentage of tetraploid and triploid, instead of hexaploid in previous studies, represents the first evidence of low ploidy in large-flower chrysanthemum, which indicated a wider range of ploidy variation in this population. The results also offer further insights to the possible evolution and the regulation of flower size of this large-flower population. Additionally, the combination of flow cytometry and chromosome-counting is proved to be efficient and necessary for large-scale ploidy screening of chrysanthemum.Keywords: Chrysanthemum, ploidy level, flow cytometr

Cloning and characterization of maize ZmSPK1, a homologue to nonfermenting1-related protein kinase2

SnRK2s play important roles in plant stresses responses. One full-length cDNA encoding a SnRK2b homologue was isolated from maize by RT-PCR and named as ZmSPK1 (for stress-induced protein kinase). The ZmSPK1 protein has 364 amino acids with an estimated molecular mass of 41.8 KD and an isoelectric point of 5.8. The deduced protein sequence has the closest identities to the members of SnRK2b group. RT-PCR analysis showed that the ZmSPK1 expression was induced by mannitol, salt and abscisic acid (ABA). Furthermore, in different tissues the ZmSPK1 showed different expression patterns and was most abundant in reproductive organs. These results suggested that ZmSPK1 might play multiple roles in abiotic stress resistance pathways, as well as in plant reproductive development.Key words: Zea mays L., SnRK2b, expression pattern, abiotic stres

Over expression of Zmda1-1 gene increases seed mass of corn

Genetic engineering of seed size and increasing biomass in crop plants has an important significant contribution to the world. Arabidopsis DA1 is one of the key factors that negatively control seed and organ size by restricting the period of cell proliferation, and the mutant of Arabidopsis DA1, da1-1 (DA1R358K) can dramatically increase the size of seed. However, it is not clear whether overexpression of Zmda1-1, the mutant of ZmDA1 which is homology of DA1 in Arabidopsis, has the same biological effect as da1-1 in Arabidopsis. Therefore, in this study, the plant expression vector harboring both Zmda1-1 driven by the corn ubiquitin promoter and a PAT selectable marker gene driven by 35S CAMV promoter was constructed and introduced into maize inbred line ‘ji444’ using pollen-tube-pathway method. Screened with herbicide phosphinothricin (PPT), 22 seedlings of 2563 transformed samples survived, and 21 independence lines of which were positive in polymerase chain reaction (PCR) analysis, and the transformation rate of T0 generation was about 0.82%. Further PCR-southern blotting results proved that the Zmda1-1 had integrated into maize genome, and the Zmda1-1 had expression in low level by reverse transcription-polymerase chain reaction (RT-PCR) analysis. The seed mass of transgenic maize increased at an average of 33.6% of empty vector control lines, and the harvest yield was increased by 23.6 to 114.1% in different lines than empty vector control lines. The result suggests that Zmda1-1 can be used to engineer higher harvest yield in crops plant, thus providing the first successful example of increasing the harvest yield of maize by transgenic technology.Key words: Transgenic maize, pollen-tube pathway, Zmda1-1, seed mass

Antibacterial, Antioxidant and Toxicological Properties of Artemisia annua Essential Oil

The essential oil of Artemisia annua grown in the Beijing area was extracted by hydrodistillation, and then its volatile components were analyzed by gas chromatography-mass spectrometry (GC-MS). The in vitro antioxidant activity of the Artemisia annua essential oil was determined by measuring the scavenging rate of DPPH and hydroxyl radicals, its antibacterial activity by using the agar diffusion method, and its toxicological properties by perfusing mice with different doses of the essential oil. The results showed that the extraction rate of the Artemisia annua essential oil was 1.04‰, with 332 essential oil components being identified by GC-MS analysis. Of these, 22 components accounted for 71.09% of the total volatiles, with relatively high contents of artemisinone (19.34%) and (+)-α-pinene (6.10%). The Artemisia annua essential oil exhibited good scavenging activities of the DPPH and hydroxyl radicals in a dose-dependent relationship. The highest scavenging rates of the DPPH and hydroxyl radicals were 40.03% and 92.97%, respectively, at an essential oil concentration of 10 mg/mL. The Artemisia annua essential oil significantly inhibited the growth of both Staphylococcus aureus and Escherichia coli, with inhibitory zones of 12.67±0.29 mm and 9.27±0.25 mm, respectively. The LD50 value of the Artemisia annua essential oil was 7491 mg/kg, indicating that it was not toxic. This study can provide a theoretical reference for the extraction and use of Artemisia annua and other Artemisia plants

Cold tolerance identification of nine Rosa L. materials and expression patterns of genes related to cold tolerance in Rosa hybrida

Members of the Rosa genus have a high ornamental value, but their cultivation area is limited by their sensitivity to cold temperatures. The aim of this study was to evaluate the cold tolerance of a range of Rosa materials, and then determine which genes were related to cold tolerance. Nine Rosa materials were subjected to a cold treatment. To identify genes related to cold tolerance, R. hybrida was treated at −15°C for 10 min, and leaves collected before and after this treatment were collected for RNA-Seq analyses. The transcript profiles of four DEGs (POD17, NDUFA9, PMA1, and b-Amy1) in R. hybrida were determined by qRT-PCR at 0 h, 1 h, 2 h, and 3 h at −15°C. Nine Rosa materials were subjected to a cold treatment, and the most cold-tolerant materials were identified as those that showed the lowest levels of electrolyte leakage and the best recovery after 30 d of growth. The most cold-tolerant materials were Rosa hybrida, Rosa rugosa ‘Pingyin 12’, and Rosa rugosa. In total, 204 significantly differentially expressed genes (DEGs) were identified, of which 88 were significantly up-regulated and 116 were significantly down-regulated under cold conditions. Gene Ontology classification and Kyoto Encyclopedia of Genes and Genomes pathway analyses showed that the DEGs were enriched in 57 pathways, especially starch and sucrose metabolism, phenylpropane biosynthesis, MAPK signaling, fructose and mannose metabolism, and oxidative phosphorylation. By transcriptional analysis, PMA1, which was related to H+ ATPase activity, was continuously up-regulated, but the transcript levels of POD17, NDUFA9, and β-Amy1 fluctuated during the freezing treatment. This research uncovered scarce cold-resistant materials and layed the foundation for further research on the cold tolerance mechanism of Rosa plants and the breeding of cold-tolerant varieties

The BACH1 inhibitor ASP8731 inhibits inflammation and vaso-occlusion and induces fetal hemoglobin in sickle cell disease

In sickle cell disease (SCD), heme released during intravascular hemolysis promotes oxidative stress, inflammation, and vaso-occlusion. Conversely, free heme can also activate expression of antioxidant and globin genes. Heme binds to the transcription factor BACH1, which represses NRF2-mediated gene transcription. ASP8731, is a selective small molecule inhibitor of BACH1. We investigated the ability of ASP8731 to modulate pathways involved in SCD pathophysiology. In HepG2 liver cells, ASP8731 increased HMOX1 and FTH1 mRNA. In pulmonary endothelial cells, ASP8731 decreased VCAM1 mRNA in response to TNF-α and blocked a decrease in glutathione in response to hemin. Townes-SS mice were gavaged once per day for 4 weeks with ASP8731, hydroxyurea (HU) or vehicle. Both ASP8731 and HU inhibited heme-mediated microvascular stasis and in combination, ASP8731 significantly reduced microvascular stasis compared to HU alone. In Townes-SS mice, ASP8731 and HU markedly increased heme oxygenase-1 and decreased hepatic ICAM-1, NF-kB phospho-p65 protein expression in the liver, and white blood cell counts. In addition, ASP8731 increased gamma-globin expression and HbF+ cells (F-cells) as compared to vehicle-treated mice. In human erythroid differentiated CD34+ cells, ASP8731 increased HGB mRNA and increased the percentage of F-cells 2-fold in manner similar to HU. ASP8731 and HU when given together induced more HbF+ cells compared to either drug alone. In CD34+ cells from one donor that was non-responsive to HU, ASP8731 induced HbF+ cells ~2-fold. ASP8731 and HU also increased HBG and HBA, but not HBB mRNA in erythroid differentiated CD34+ cells derived from SCD patients. These data indicate that BACH1 may offer a new therapeutic target to treat SCD

Effects of gibberellin mutations on in vitro shoot bud regeneration of Arabidopsis

Tissue culture provides a useful system to investigate how plant hormones are involved in this process. Auxin and cytokinin are widely used in plant regeneration. Gibberellin is also an important plant hormone in regulating plant growth and development. It is interesting to know the effects of gibberellin and its signalling pathway on plant regeneration. In this report Arabidopsis thaliana landsberg (wild type), ga1-3 (gibberellin biosynthesis deficiency mutant), gai (gibberellin insensitive mutant), penta mutant (lacking GA1, GAI, RGA, RGL1, RGL2) and tetra mutant (lacking GAI, RGA, RGL1, RGL2) were used as materials to investigate how plant regeneration progress was affected in these mutants under different conditions. The results showed that more shoot buds were regenerated in ga1-3 and gai than in wild type, penta and tetra mutant in the normal shoot induction medium. The frequency of shoot bud regeneration in different mutants also varied remarkably when auxin : cytokinin ratio in the medium changed. Only penta mutant had shoot bud regeneration without auxin in the medium. When the ratio increased wild type, ga1-3 and gai had higher performance in shoot bud regeneration than penta mutant. When cytokinin level increased from 0.1 to 0.5 mg l -1 , shoot bud regeneration frequency of ga1-3, wild type and tetra increased remarkably except for that of penta and gai. Only the shoot bud regeneration frequency of gai did not change significantly when cytokinin level increased from 0.5 to 5 mg l -1 . These gibberellin-related mutants also responded differently to NPA (an auxin polar transport inhibitor) in plant regeneration. Our results indicate gibberellin and its related pathway are also involved in plant organogenesis: gibberellin inhibitor and auxin polar transport inhibitor can promote plant organogenesis. This might provide a new way for the regeneration of recalcitrant species

Comparative transcriptome analysis of Ts (Resistant genotype) and Ma (Susceptible genotype) marigold (Tagetes erecta L.) leaves in response to Alternaria tagetica

Marigold black spot caused by Alternaria tagetica is a major disease that can decrease marigold production by 40%, resulting in serious economic losses. In this study, we identified many genes responsive to A. tagetica in the resistant and susceptible marigold genotypes. Analyses of differentially expressed genes, expression trends, and a weighted gene co-expression network revealed a series of hub genes with key roles in different A. tagetica infection stages. Additionally, 1 216 unigenes encoding transcription factors from eight families were differentially expressed between Ts and Ma. Moreover, R genes from various families (e.g., N, NL, RLP, and TNL) were differentially expressed in the two marigold genotypes before and after the inoculation with A. tagetica. Pathway diagrams were used to visualize the leaf transcriptional changes in the two marigold genotypes infected by A. tagetica to clarify the effects of A. tagetica on the expression patterns of genes involved in phosphatidylinositol signaling, plant–pathogen interactions, and plant hormone signal transduction. We identified candidate genes related to disease resistance and generated valuable resources for analyzing the candidate gene functions related to black spot resistance in marigold. The study data may be useful for the molecular marker-assisted screening and breeding of marigold lines with increased disease resistance