739 research outputs found
Flexible nanoassembly for sequestering non-native proteins
A crystal structure of a yeast small heat shock protein reported by Hanazono and colleagues in this issue of Structure reveals the versatility of the α-crystallin domain dimer for building assemblies of different size and symmetry. The domains assemble into a vessel filled with hydrophobic sequence extensions enriched with phenylalanines
Visual Imagery and Self-Questioning: Strategies to Improve Comprehension of Written
This research was published by the KU Center for Research on Learning, formerly known as the University of Kansas Institute for Research in Learning Disabilities.Two learning strategies, visual imagery and-self-questioning, designed to increase reading comprehension were taught to six learning disabled students using a multiple-baseline across strategies design. Results of the study indicate that LD students can learn the two strategies and can apply them in both reading-ability level and grade-level materials. The students' use of the strategies resulted in greater comprehension scores from the pretest in baseline to the posttest after training.
Instructional time for each strategy ranged from five to seven hours
Striatal dopamine D2/D3 receptor binding in pathological gambling is correlated with mood-related impulsivity
AbstractPathological gambling (PG) is a behavioural addiction associated with elevated impulsivity and suspected dopamine dysregulation. Reduced striatal dopamine D2/D3 receptor availability has been reported in drug addiction, and may constitute a premorbid vulnerability marker for addictive disorders. The aim of the present study was to assess striatal dopamine D2/D3 receptor availability in PG, and its association with trait impulsivity. Males with PG (n=9) and male healthy controls (n=9) underwent [11C]-raclopride positron emission tomography imaging and completed the UPPS-P impulsivity scale. There was no significant difference between groups in striatal dopamine D2/D3 receptor availability, in contrast to previous reports in drug addiction. However, mood-related impulsivity (‘Urgency’) was negatively correlated with [11C]-raclopride binding potentials in the PG group. The absence of a group difference in striatal dopamine binding implies a distinction between behavioural addictions and drug addictions. Nevertheless, our data indicate heterogeneity in dopamine receptor availability in disordered gambling, such that individuals with high mood-related impulsivity may show differential benefits from dopamine-based medications
Does daily consumption of vitamin K1 from cruciferous vegetables reach the circulation and the knee joint?
Irish Section Meeting, 20–22 June 2018, Targeted approaches to tackling current nutritional issue
PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
© 2017 The Authors. Published by OUP. This is an open access article available under a Creative Commons licence.
The published version can be accessed at the following link on the publisher’s website: https://doi.org/10.1093/nar/gkx1070The Protein Data Bank in Europe (PDBe, pdbe.org) is actively engaged in the deposition, annotation, remediation, enrichment and dissemination of macromolecular structure data. This paper describes new developments and improvements at PDBe addressing three challenging areas: data enrichment, data dissemination and functional reusability. New features of the PDBe Web site are discussed, including a context dependent menu providing links to raw experimental data and improved presentation of structures solved by hybrid methods. The paper also summarizes the features of the LiteMol suite, which is a set of services enabling fast and interactive 3D visualization of structures, with associated experimental maps, annotations and quality assessment information. We introduce a library of Web components which can be easily reused to port data and functionality available at PDBe to other services. We also introduce updates to the SIFTS resource which maps PDB data to other bioinformatics resources, and the PDBe REST API.Wellcome Trust [104948]; UK Biotechnology and Biological Sciences Research Council [BB/M011674/1, BB/N019172/1, BB/M020347/1]; European Union [284209]; European Molecular Biology Laboratory (EMBL). Funding for open access charge: EMBL.Published versio
Weather and Financial Risk-Taking: Is Happiness the Channel?
Weather variables, and sunshine in particular, are found to be strongly correlated with financial variables. I consider self-reported happiness as a channel through which sunshine affects financial variables. I examine the influence of happiness on risk-taking behavior by instrumenting individual happiness with regional sunshine, and I find that happy people appear to be more risk-averse in financial decisions, and accordingly choose safer investments. Happy people take more time for making decisions and have more self-control. Happy people also expect to live longer and accordingly seem more concerned about the future than the present, and expect less inflation
EWOCS-I: The catalog of X-ray sources in Westerlund 1 from the Extended Westerlund 1 and 2 Open Clusters Survey
Context. With a mass exceeding several 104 M⊙ and a rich and dense population of massive stars, supermassive young star clusters represent the most massive star-forming environment that is dominated by the feedback from massive stars and gravitational interactions among stars. Aims. In this paper we present the Extended Westerlund 1 and 2 Open Clusters Survey (EWOCS) project, which aims to investigate the influence of the starburst environment on the formation of stars and planets, and on the evolution of both low and high mass stars. The primary targets of this project are Westerlund 1 and 2, the closest supermassive star clusters to the Sun. Methods. The project is based primarily on recent observations conducted with the Chandra and JWST observatories. Specifically, the Chandra survey of Westerlund 1 consists of 36 new ACIS-I observations, nearly co-pointed, for a total exposure time of 1 Msec. Additionally, we included 8 archival Chandra/ACIS-S observations. This paper presents the resulting catalog of X-ray sources within and around Westerlund 1. Sources were detected by combining various existing methods, and photon extraction and source validation were carried out using the ACIS-Extract software. Results. The EWOCS X-ray catalog comprises 5963 validated sources out of the 9420 initially provided to ACIS-Extract, reaching a photon flux threshold of approximately 2 × 10−8 photons cm−2 s −1 . The X-ray sources exhibit a highly concentrated spatial distribution, with 1075 sources located within the central 1 arcmin. We have successfully detected X-ray emissions from 126 out of the 166 known massive stars of the cluster, and we have collected over 71 000 photons from the magnetar CXO J164710.20-455217.Fil: Guarcello, Mario Giuseppe. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Flaccomio, Ettore. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Albacete Colombo, Juan Facundo. Universidad Nacional de Río Negro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Almendros Abad, Víctor. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Anastasopoulou, Konstantina. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Andersen, M.. European Southern Observatory; AlemaniaFil: Argiroffi, C.. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; Italia. Università degli Studi di Palermo; ItaliaFil: Bayo, Amelia. European Southern Observatory; AlemaniaFil: Bartlett, E.S.. European Southern Observatory; AlemaniaFil: Bastian, N.. Donostia International Physics Center; España. Basque Foundation For Science; España. Liverpool John Moores University; Reino UnidoFil: De Becker, Michaël. Université de Liège; BélgicaFil: Best, William M. J.. University of Texas at Austin; Estados UnidosFil: Bonito, R.. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Borghese, Alice. Instituto de Astrofísica de Canarias; España. Universidad de La Laguna; EspañaFil: Calzetti, D.. University of Massachusetts; Estados UnidosFil: Castellanos, R.. Centro de Astrobiología; España. Consejo Superior de Investigaciones Científicas; EspañaFil: Cecchi Pestellini, C.. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Clark, J. S.. The Open University; Reino UnidoFil: Clarke, C. J.. University of Cambridge; Estados UnidosFil: Zelati, Francesco Coti. Instituto de Estudios Espaciales de Cataluña; España. Consejo Superior de Investigaciones Científicas; EspañaFil: Damiani, Jeremy. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Drake, J.J.. Harvard-Smithsonian Center for Astrophysics; Estados UnidosFil: Gennaro, Mario. Space Telescope Science Institute; Estados Unidos. University Johns Hopkins; Estados UnidosFil: Mapelli, M.. Università di Padova; Italia. Ruprecht Karls Universitat Heidelberg; AlemaniaFil: Martinez Galarza, J. R.. Harvard-Smithsonian Center for Astrophysics; Estados UnidosFil: Micela, G.. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; ItaliaFil: Miceli, M.. Istituto Nazionale di Astrofísica. Osservatorio Astronómico di Palermo; Italia. Università degli Studi di Palermo; ItaliaFil: Moraux, E.. Universite Grenoble Alpes; FranciaFil: Winter, A.. Observatoire de la Côte D'azur; Francia. Universite Grenoble Alpes; FranciaFil: Wright, N. J.. Keele University; Reino UnidoFil: Zeidler, Peter. European Southern Observatory; Alemania. Space Telescope Science Institute; Estados Unido
Clinically Actionable Hypercholesterolemia and Hypertriglyceridemia in Children with Nonalcoholic Fatty Liver Disease
OBJECTIVE:
To determine the percentage of children with nonalcoholic fatty liver disease (NAFLD) in whom intervention for low-density lipoprotein cholesterol or triglycerides was indicated based on National Heart, Lung, and Blood Institute guidelines.
STUDY DESIGN:
This multicenter, longitudinal cohort study included children with NAFLD enrolled in the National Institute of Diabetes and Digestive and Kidney Diseases Nonalcoholic Steatohepatitis Clinical Research Network. Fasting lipid profiles were obtained at diagnosis. Standardized dietary recommendations were provided. After 1 year, lipid profiles were repeated and interpreted according to National Heart, Lung, and Blood Institute Expert Panel on Integrated Guidelines for Cardiovascular Health and Risk Reduction. Main outcomes were meeting criteria for clinically actionable dyslipidemia at baseline, and either achieving lipid goal at follow-up or meeting criteria for ongoing intervention.
RESULTS:
There were 585 participants, with a mean age of 12.8 years. The prevalence of children warranting intervention for low-density lipoprotein cholesterol at baseline was 14%. After 1 year of recommended dietary changes, 51% achieved goal low-density lipoprotein cholesterol, 27% qualified for enhanced dietary and lifestyle modifications, and 22% met criteria for pharmacologic intervention. Elevated triglycerides were more prevalent, with 51% meeting criteria for intervention. At 1 year, 25% achieved goal triglycerides with diet and lifestyle changes, 38% met criteria for advanced dietary modifications, and 37% qualified for antihyperlipidemic medications.
CONCLUSIONS:
More than one-half of children with NAFLD met intervention thresholds for dyslipidemia. Based on the burden of clinically relevant dyslipidemia, lipid screening in children with NAFLD is warranted. Clinicians caring for children with NAFLD should be familiar with lipid management
Measurement of χ c1 and χ c2 production with s√ = 7 TeV pp collisions at ATLAS
The prompt and non-prompt production cross-sections for the χ c1 and χ c2 charmonium states are measured in pp collisions at s√ = 7 TeV with the ATLAS detector at the LHC using 4.5 fb−1 of integrated luminosity. The χ c states are reconstructed through the radiative decay χ c → J/ψγ (with J/ψ → μ + μ −) where photons are reconstructed from γ → e + e − conversions. The production rate of the χ c2 state relative to the χ c1 state is measured for prompt and non-prompt χ c as a function of J/ψ transverse momentum. The prompt χ c cross-sections are combined with existing measurements of prompt J/ψ production to derive the fraction of prompt J/ψ produced in feed-down from χ c decays. The fractions of χ c1 and χ c2 produced in b-hadron decays are also measured
PDBe: improved accessibility of macromolecular structure data from PDB and EMDB
© 2015 The Authors. Published by OUP. This is an open access article available under a Creative Commons licence.
The published version can be accessed at the following link on the publisher’s website: https://doi.org/10.1093/nar/gkv1047The Protein Data Bank in Europe (http://pdbe.org) accepts and annotates depositions of macromolecular structure data in the PDB and EMDB archives and enriches, integrates and disseminates structural information in a variety of ways. The PDBe website has been redesigned based on an analysis of user requirements, and now offers intuitive access to improved and value-added macromolecular structure information. Unique value-added information includes lists of reviews and research articles that cite or mention PDB entries as well as access to figures and legends from full-text open-access publications that describe PDB entries. A powerful new query system not only shows all the PDB entries that match a given query, but also shows the 'best structures' for a given macromolecule, ligand complex or sequence family using data-quality information from the wwPDB validation reports. A PDBe RESTful API has been developed to provide unified access to macromolecular structure data available in the PDB and EMDB archives as well as value-added annotations, e.g. regarding structure quality and up-to-date cross-reference information from the SIFTS resource. Taken together, these new developments facilitate unified access to macromolecular structure data in an intuitive way for non-expert users and support expert users in analysing macromolecular structure data.The Wellcome Trust [88944, 104948]; UK Biotechnology and Biological Sciences Research Council [BB/J007471/1, BB/K016970/1, BB/M013146/1, BB/M011674/1]; National Institutes of Health [GM079429]; UK Medical Research Council [MR/L007835/1]; European Union [284209]; CCP4; European Molecular Biology Laboratory (EMBL). Funding for open access charge: The Wellcome Trust.Published versio
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