Prevalence of six viruses in potato seed tubers produced in informal seed system in the North West Region of Cameroon.

Evidence has accumulated that there is a trade-off between benefits and costs associated with rapid growth. A trade-off between growth rates and critical. swimming speed (U-crit) had been also reported to be common in teleost fish. We hypothesize that growth acceleration in the F-3 generation of "all-fish" growth hormone gene (GH) transgenic common carp (Cyprinus carpio L.) would reduce the swimming abilities. Growth and swimming performance between transgenic fish and non-transgenic controls were) compared. The results showed that transgenic fish had a mean body weight 1.4-1.9-fold heavier, and a mean specific growth rate (SGR) value 6%-10% higher than the controls. Transgenic fish, however, had a mean absolute U-crit (cm/s) value 22% or mean relative Ucrit (BL/s) value 24% lower than the controls. It suggested that fast-growing "all-fish" GH-transgenic carp were inferior swimmers. It is also supported that there was a trade-off between growth rates and swimming performance, i.e. faster-growing individuals had lower critical swimming speed

Agarose-resolvable InDel markers based on whole genome re-sequencing in cucumber

Insertion and Deletion (InDel) are common features in genomes and are associated with genetic variation. The whole-genome re-sequencing data from two parents (X1 and X2) of the elite cucumber (Cucumis sativus) hybrid variety Lvmei No.1 was used for genome-wide InDel polymorphisms analysis. Obtained sequence reads were mapped to the genome reference sequence of Chinese fresh market type inbred line ‘9930’ and gaps conforming to InDel were pinpointed. Further, the level of cross-parents polymorphism among five pairs of cucumber breeding parents and their corresponding hybrid varieties were used for evaluating hybrid seeds purity test efficiency of InDel markers. A panel of 48 cucumber breeding lines was utilized for PCR amplification versatility and phylogenetic analysis of these markers. In total, 10,470 candidate InDel markers were identified for X1 and X2. Among these, 385 markers with more than 30 nucleotide difference were arbitrary chosen. These markers were selected for experimental resolvability through electrophoresis on an Agarose gel. Two hundred and eleven (211) accounting for 54.81% of markers could be validated as single and clear polymorphic pattern while 174 (45.19%) showed unclear or monomorphic genetic bands between X1 and X2. Cross-parents polymorphism evaluation recorded 68 (32.23%) of these markers, which were designated as cross-parents transferable (CPT) InDel markers. Interestingly, the marker InDel114 presented experimental transferability between cucumber and melon. A panel of 48 cucumber breeding lines including parents of Lvmei No. 1 subjected to PCR amplification versatility using CPT InDel markers successfully clustered them into fruit and common cucumber varieties based on phylogenetic analysis. It is worth noting that 16 of these markers were predominately associated to enzymatic activities in cucumber. These agarose-based InDel markers could constitute a valuable resource for hybrid seeds purity testing, germplasm classification and marker-assisted breeding in cucumber

Determination of scanned virus-free potato planting materials by positive selection and screening of tubers from seed stores in the western highlands of Cameroon

Positive selection for the identification of virus–free potato planting material was evaluated in four locations in Cameroon. Leaves from asymptomatic plants were randomly collected, the plants marked and tubers collected four weeks later, and screened with DAS-ELISA for PLRV, PVY, PVA, PVX, PVS and PVM presence. Five viruses were prevalent in leaves while four prevalent in tubers. Potato virus M was highly prevalent in leaves and tubers while PVY was high only in leaves. Potato virus A was absent in both leaves and tubers while PVX was free only in tubers. A positive correlation was observed between virus prevalence in leaves and tubers (r=0.806). The prevalence of the six viruses in potato seed tubers from four seed stores was tested. Potato virus M was the most prevalent, while PLRV was the least. Small, medium and large tuber sizes were tested for the viruses, and infection rates decreased significantly the bigger the tuber size. Positive selection though not highly efficient can be recommended for resource-poor farmers, to control the economically important potato viruses. Tuber size can serve as a guide to identify healthy tubers, but must be combined with laboratory tests for effective use in selecting seeds for planting.Keywords: Potato viruses, virus-free tubers, positive selection

Prevalence of Six Viruses in Potato Seed Tubers Produced in Informal Seed System in the North West Region of Cameroon

Potato (Solanum tuberosum L.) is an important cash-food crop, which is widely grown in three of the five agro-ecological zones of Cameroon. A study was carried out to determine the prevalence of PVA, PLRV, PVM, PVS, PVX and PVY in 1175 sprouted potato seed tubers of different diameters collected from four seed stores in the North West Region of Cameroon. The study also sorts to ascertain variations in virus incidence in small, medium and large size sprouted tubers prior to planting. The DAS-ELISA method was used to test for the presence of these viruses. Results showed significant differences in the prevalence of the six viruses with PVM being the most prevalent (92%), while PLRV was least prevalent (35%) in all the four seed stores sampled.  Upper-Farm store registered the highest relative prevalence (82%), with PVM detected in all the tubers while samples from Rock-Farm store showed the least relative incidence (55%) with no PLRV detected. Viruses were significantly most prevalent in small size tubers (71%) and least in large size potato tubers (63%). Our results suggest that tuber size can serve as a guide to identify healthy (virus-free) tubers. Farmers could therefore use large size potato tubers for planting