Using Pilot Systems to Execute Many Task Workloads on Supercomputers

High performance computing systems have historically been designed to support applications comprised of mostly monolithic, single-job workloads. Pilot systems decouple workload specification, resource selection, and task execution via job placeholders and late-binding. Pilot systems help to satisfy the resource requirements of workloads comprised of multiple tasks. RADICAL-Pilot (RP) is a modular and extensible Python-based pilot system. In this paper we describe RP's design, architecture and implementation, and characterize its performance. RP is capable of spawning more than 100 tasks/second and supports the steady-state execution of up to 16K concurrent tasks. RP can be used stand-alone, as well as integrated with other application-level tools as a runtime system

Investigation of a generalized Obukhov Model for Turbulence

We introduce a generalization of Obukhov's model [A.M. Obukhov, Adv. Geophys. 6, 113 (1959)] for the description of the joint position-velocity statistics of a single fluid particle in fully developed turbulence. In the presented model the velocity is assumed to undergo a continuous time random walk. This takes into account long time correlations. As a consequence the evolution equation for the joint position-velocity probability distribution is a Fokker-Planck equation with a fractional time derivative. We determine the solution of this equation in the form of an integral transform and derive a relation for arbitrary single time moments. Analytical solutions for the joint probability distribution and its moments are given.Comment: 10 page

Forging strategic partnerships with industry: The Industrial Fellows Program

Science, technology, and industrial policy are at an important nexus due to long developing trends in the national and international economy and recent events in national security affairs. The research and development assets built by the American taxpayer in response to the Cold War face a quest for relevance in the new era. National competitiveness in international markets has emerged as an important new priority. To better understand the perspective of US industry the management of the Los Alamos National Laboratory has initiated an Industrial Fellows Program which has placed six individuals at US corporations. Their goal is to create strategic partnerships through increased understanding of technical needs of industry and the technical capabilities of the Laboratory

Avalanches, Scaling and Coherent Noise

We present a simple model of a dynamical system driven by externally-imposed coherent noise. Although the system never becomes critical in the sense of possessing spatial correlations of arbitrarily long range, it does organize into a stationary state characterized by avalanches with a power-law size distribution. We explain the behavior of the model within a time-averaged approximation, and discuss its potential connection to the dynamics of earthquakes, the Gutenberg-Richter law, and to recent experiments on avalanches in rice piles.Comment: 17 pages, 4 Postscript figures, written in LaTeX using RevTeX and epsfig.st

The association between retinal vascular geometry changes and diabetic retinopathy and their role in prediction of progression: an exploratory study

Background: The study describes the relationship of retinal vascular geometry (RVG) to severity of diabetic retinopathy (DR), and its predictive role for subsequent development of proliferative diabetic retinopathy (PDR). Methods. The research project comprises of two stages. Firstly, a comparative study of diabetic patients with different grades of DR. (No DR: Minimal non-proliferative DR: Severe non-proliferative DR: PDR) (10:10: 12: 19). Analysed RVG features including vascular widths and branching angles were compared between patient cohorts. A preliminary statistical model for determination of the retinopathy grade of patients, using these features, is presented. Secondly, in a longitudinal predictive study, RVG features were analysed for diabetic patients with progressive DR over 7 years. RVG at baseline was examined to determine risk for subsequent PDR development. Results: In the comparative study, increased DR severity was associated with gradual vascular dilatation (p = 0.000), and widening of the bifurcating angle (p = 0.000) with increase in smaller-child-vessel branching angle (p = 0.027). Type 2 diabetes and increased diabetes duration were associated with increased vascular width (p = <0.05 In the predictive study, at baseline, reduced small-child vascular width (OR = 0.73 (95 CI 0.58-0.92)), was predictive of future progression to PDR. Conclusions: The study findings suggest that RVG alterations can act as novel markers indicative of progression of DR severity and establishment of PDR. RVG may also have a potential predictive role in determining the risk of future retinopathy progression. © 2014 Habib et al.; licensee BioMed Central Ltd

Effects of processing parameters on the laser deposition of high temperature superconducting thin films

Y{sub 2}O{sub 3} pressed powders were ablated by pulses from a XeCl excimer laser, operating at 308 nm, 150 mJ/pulse, {approx}15 nsec/pulse and 20 Hz. Emission spectra from Y* and YO* were recorded as a function of ambient oxygen pressure in the range 10{sup {minus}5} -- 4 {times} 10{sup {minus}1} Torr, at a laser fluence of {approx} 4J/cm{sup 2}. A kinetic model is developed to describe the results, and the application to production of laser-deposited high-temperature superconductor thin films is discussed. 13 refs., 4 figs

Scalable fault tolerant protocol for parallel runtime environments

Abstract. The number of processors embedded on high performance computing platforms is growing daily to satisfy users desire for solving larger and more complex problems. Parallel runtime environments have to support and adapt to the underlying libraries and hardware which require a high degree of scalability in dynamic environments. This paper presents the design of a scalable and fault tolerant protocol for supporting parallel runtime environment communications. The protocol is designed to support transmission of messages across multiple nodes with in a self-healing topology to protect against recursive node and process failures. A formal protocol verification has validated the protocol for both the normal and failure cases. We have implemented multiple routing algorithms for the protocol and concluded that the variant rulebased routing algorithm yields the best overall results for damaged and incomplete topologies.