Melting of two dimensional solids on disordered substrate

We study 2D solids with weak substrate disorder, using Coulomb gas renormalisation. The melting transition is found to be replaced by a sharp crossover between a high $T$ liquid with thermally induced dislocations, and a low $T$ glassy regime with disorder induced dislocations at scales larger than $\xi_{d}$ which we compute ($\xi_{d}\gg R_{c}\sim R_{a}$, the Larkin and translational correlation lengths). We discuss experimental consequences, reminiscent of melting, such as size effects in vortex flow and AC response in superconducting films.Comment: 4 pages, uses RevTeX, Amssymb, multicol,eps

How do roots respond to osmotic stress? A transcriptomic approach to address this question in a non-model crop

Drought is a complex phenomenon that is relevant for many crops. Performing high-throughput transcriptomics in non-model crops is challenging. The non-model crop where our workflow has been tested on is banana (Musa spp.), which ranks among the top ten staple foods (total production over 145 million tons in 2013 (FAOstat)[1]). Bananas need vast amounts of water and even mild-drought conditions are responsible for considerable yield losses[2]. To characterize drought in the roots of different banana genotypes, we designed a lab model based on osmotic stress (5% PEG treatment for 3 days) and performed mRNA-seq analysis[3]. Using Illumina technology, 18 cDNA libraries were sequenced producing around 568 million high quality reads, of which 70-84% were mapped to the diploid reference genome[4]. We show that the applied stress leads to a drop in energy levels inducing a metabolic shift towards (i) higher oxidative respiration, (ii) alternative respiration and (iii) fermentation. We also analyzed the expression patterns of paralogous genes belonging to the same gene families and detected possible cases of sub-functionalization

XY models with disorder and symmetry-breaking fields in two dimensions

The combined effect of disorder and symmetry-breaking fields on the two-dimensional XY model is examined. The study includes disorder in the interaction among spins in the form of random phase shifts as well as disorder in the local orientation of the field. The phase diagrams are determined and the properties of the various phases and phase transitions are calculated. We use a renormalization group approach in the Coulomb gas representation of the model. Our results differ from those obtained for special cases in previous works. In particular, we find a changed topology of the phase diagram that is composed of phases with long-range order, quasi-long-range order, and short-range order. The discrepancies can be ascribed to a breakdown of the fugacity expansion in the Coulomb gas representation. Implications for physical systems such as planar Josephson junctions and the faceting of crystal surfaces are discussed.Comment: 17 pages Latex with 5 eps figures, change: acknowledgment extende

Disordered periodic systems at the upper critical dimension

The effects of weak point-like disorder on periodic systems at their upper critical dimension D_c for disorder are studied. The systems studied range from simple elastic systems with D_c=4 to systems with long range interactions with D_c=2 and systems with D_c=3 such as the vortex lattice with dispersive elastic constants. These problems are studied using the Gaussian Variational method and the Functional Renormalisation Group. In all the cases studied we find a typical ultra-slow loglog(x) growth of the asymptotic displacement correlation function, resulting in nearly perfect translational order. Consequences for the Bragg glass phase of vortex lattices are discussed.Comment: 12 RevTex pages, uses epsfig, 2 figure

Complex Pharmacology of Free Fatty Acid Receptors

G protein-coupled receptors (GPCRs) are historically the most successful family of drug targets. In recent times it has become clear that the pharmacology of these receptors is far more complex than previously imagined. Understanding of the pharmacological regulation of GPCRs now extends beyond simple competitive agonism or antagonism by ligands interacting with the orthosteric binding site of the receptor to incorporate concepts of allosteric agonism, allosteric modulation, signaling bias, constitutive activity, and inverse agonism. Herein, we consider how evolving concepts of GPCR pharmacology have shaped understanding of the complex pharmacology of receptors that recognize and are activated by nonesterified or “free” fatty acids (FFAs). The FFA family of receptors is a recently deorphanized set of GPCRs, the members of which are now receiving substantial interest as novel targets for the treatment of metabolic and inflammatory diseases. Further understanding of the complex pharmacology of these receptors will be critical to unlocking their ultimate therapeutic potential

Interacting Arrays of Steps and Lines in Random Media

The phase diagram of two interacting planar arrays of directed lines in random media is obtained by a renormalization group analysis. The results are discussed in the contexts of the roughening of reconstructed crystal surfaces, and the pinning of flux line arrays in layered superconductors. Among the findings are a glassy flat phase with disordered domain structures, a novel second-order phase transition with continuously varying critical exponents, and the generic disappearance of the glassy ``super-rough'' phases found previously for a single array.Comment: 4 pages, REVTEX 3.0, uses epsf,multicol, 3 .eps-figures, submitted to PR