Human Metapneumovirus, Peru

We retrospectively studied 420 pharyngeal swab specimens collected from Peruvian and Argentinean patients with influenzalike illness in 2002 and 2003 for evidence of human metapneumovirus (HMPV). Twelve specimens (2.3%) were positive by multiple assays. Six specimens yielded HMPV isolates. Four of the 6 isolates were of the uncommon B1 genotype

Mechanisms for cooperative shared memory

This paper explores the complexity of implementing directory protocols by examining their mechanisms - primitive operations on directories, caches, and network interfaces. We compare the following protocols: Dir1B, Dir4B, Dir4NB, DirnNB, Dir1SW and an improved version of Dir1SW (Dir1SW+). The comparison shows that the mechanisms and mechanism sequencing of Dir1SW and Dir1SW+ are simpler than those for other protocols. We also compare protocol performance by running eight benchmarks on 32 processor systems. Simulations show that Dir1SW+'s performance is comparable to more complex directory protocols. The significant disparity in hardware complexity and the small difference in performance argue that Dir1SW+ may be a more effective use of resources. The small performance difference is attributable to two factors: the low degree of sharing in the benchmarks and Check-In/Check-Out (CICO) directives

High-throughput gene discovery in the rat

The rat is an important animal model for human diseases and is widely used in physiology. In this article we present a new strategy for gene discovery based on the production of ESTs from serially subtracted and normalized cDNA libraries, and we describe its application for the development of a comprehensive nonredundant collection of rat ESTs. Our new strategy appears to yield substantially more EST clusters per ESTs sequenced than do previous approaches that did not use serial subtraction. However, multiple rounds of library subtraction resulted in high frequencies of otherwise rare internally primed cDNAs, defining the limits of this powerful approach. To date, we have generated >200,000 3′ ESTs from >100 cDNA libraries representing a wide range of tissues and developmental stages of the laboratory rat. Most importantly, we have contributed to ∼50,000 rat UniGene clusters. We have identified, arrayed, and derived 5′ ESTs from >30,000 unique rat cDNA clones. Complete information, including radiation hybrid mapping data, is also maintained locally at http://genome.uiowa.edu/clcg.html. All of the sequences described in this article have been submitted to the dbEST division of the NCBI

Genotype Prevalence and Risk Factors for Severe Clinical Adenovirus Infection, United States 2004-2006

Recently, epidemiological and clinical data have revealed important changes with regard to clinical adenovirus infection, including alterations in antigenic presentation, geographical distribution, and virulence of the virus

Beyond water homeostasis:diverse functional roles of mammalian aquaporins

Background - Aquaporin (AQP) water channels are best known as passive transporters of water that are vital for water homeostasis. Scope of review - AQP knockout studies in whole animals and cultured cells, along with naturally occurring human mutations suggest that the transport of neutral solutes through AQPs has important physiological roles. Emerging biophysical evidence suggests that AQPs may also facilitate gas (CO2) and cation transport. AQPs may be involved in cell signalling for volume regulation and controlling the subcellular localization of other proteins by forming macromolecular complexes. This review examines the evidence for these diverse functions of AQPs as well their physiological relevance. Major conclusions - As well as being crucial for water homeostasis, AQPs are involved in physiologically important transport of molecules other than water, regulation of surface expression of other membrane proteins, cell adhesion, and signalling in cell volume regulation. General significance - Elucidating the full range of functional roles of AQPs beyond the passive conduction of water will improve our understanding of mammalian physiology in health and disease. The functional variety of AQPs makes them an exciting drug target and could provide routes to a range of novel therapies

Nanoscale Resonance Energy Transfer-Based Devices for Probabilistic Computing

© 1981-2012 IEEE.Despite the theoretical advances in probabilistic computing, a fundamental mismatch persists between the deterministic hardware that traditional computers use and the stochastic nature of probabilistic algorithms. In this article, the authors propose Resonance Energy Transfer (RET) between chromophores as an enabling technology for probabilistic computing functional units. As a natural continuous-time Markov chain, RET networks can physically implement efficient samplers with arbitrary probability distributions and have great potential for accelerating probabilistic algorithms

Architectural implications of nanoscale-integrated sensing and computing

The authors explore nanoscale sensor processor (nSP) architectures. Their design includes a simple accumulator-based instruction-set architecture, sensors, limited memory, and instruction-fused sensing. Using nSP technology based on optical resonance energy transfer logic helps them decrease the design's size; their smallest design is about the size of the largest-known virus. © 2006 IEEE