118 research outputs found

    A novel secondary metabolite from the Eucalyptus pathogen Mycosphaerella cryptica

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    The most abundant metabolite of the eucalyptus leaf spot pathogen Mycosphaerella cryptica was extracted from agar cultures. The structure of the compound was elucidated by detailed studies of NMR and MS data and by comparison with derivatives. The compound is a previously undescribed diphenylether structurally related to pannaric acid found in lichens. Culture extracts from another species of Mycosphaerella isolated from the same environment yielded 5-hydroxymethylfuran- 3-carboxylic acid, a furan acidic compound previously isolated from a basidiomycete fungus. Assays for bioactivity of these metabolites revealed no evidence for antimicrobial activity. Some phytotoxicity was seen on newly emerged leaves of Eucalyptus globulus, but not on juvenile or adult leaves, when treated with either metabolite

    Development of microsatellite and mating type markers for the pine needle pathogen Lecanosticta acicola

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    Lecanosticta acicola is an ascomycete that causes brown spot needle blight of pine species in many regions of the world. This pathogen is responsible for a major disease of Pinus palustris in the USA and is a quarantine organism in Europe. In order to study the genetic diversity and patterns of spread of L. acicola, eleven microsatellite markers and two mating type markers were developed. An enrichment protocol was used to isolate microsatellite-rich DNA regions and 18 primer pairs were designed to flank these regions, of which eleven were polymorphic. A total of 93 alleles were obtained across all loci from forty isolates of L. acicola from the USA with an allelic diversity range of 0.095 to 0.931 per locus. Cross-species amplification with some of the markers was obtained with L. gloeospora, L. guatemalensis and Dothistroma septosporum, but not with D. pini. Mating type (MAT) markers amplifying both idiomorphs were also developed to determine mating type distribution in populations. These markers were designed based on alignments of both idiomorphs of nine closely related plant pathogens and a protocol for multiplex PCR amplification of the MAT loci was optimised. The MAT markers are not species specific and also amplify the MAT loci in Dothistroma septosporum, D. pini, L. gloeospora and L. guatemalensis. Both types of genetic markers developed in this study will be valuable for future investigations of the population structure, genetic diversity and invasion history of L. acicola on a global scale.Financial support to Josef Janoušek from the AKTION Czech Republic – Austria (project 58p23), the Scholarship Foundation of the Republic of Austria (OeAD-GmbH, Austria),theHlavka Foundation (Czech Republic; for internship at Massey University, New Zealand) and the Intern Grant Agency of the Faculty of Forestry and Wood Technology (Mendel University in Brno, Czech Republic).The project was supported financially by COST CZ LD12031 (DIAROD), the FPS COST Action FP1102 (DIAROD) and the European Union’s Seventh Framework Programme FP7 2007–2013 (KBBE 2009–3) under grant agreement 245268 ISEFOR.http://link.springer.com/journal/13313hb201

    Long Term Studies of Z sources with HEXTE/RXTE

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    We have analyzed the long pointed observations of the Z sources in the Rossi X-Ray Timing Explorer (RXTE) public archive to study the high energy emission in those sources. Our analysis is concentrated on the High Energy X--Ray Timing Experiment (HEXTE) waveband, since we are primarily interested in studying the hard X-ray (i.e., E > 20 keV) production in those sources. We give here the preliminary results of this ongoing study. We have found no hard X-ray tails (besides Sco X-1) in our database from any of the Z sources, i.e., GX 349+2 (< 7.9 x 10^-5 photons cm^-2 s^-1, 3 sigma, 50-150 keV), Cyg X-2 (< 8.4 x 10^-5 photons cm^-2 s^-1, 3 sigma, 50-150 keV), GX 17+2 (< 4.2 x 10^-5 photons cm^-2 s^-1, 3 sigma, 50-150 keV), GX 5-1 (< 2.1 x 10^-5 photons cm^-2 s^-1, 3 sigma, 50-150 keV), and Gx 340+0 (< 6.0 x 10^-5 photons cm^-2 s^-1, 3 sigma, 50-150 keV). From the point of view of HEXTE/RXTE observations shown here, the production of hard X-ray tails in Z sources is a process triggered when special conditions are fulfilled. One of these conditions, as derived from our analysis, is a threshold of ~ 4 x 10^36 erg s^-1 for the luminosity of the source's thermal component.Comment: LaTeX, 4 pages, all styles included. Presented at COSPAR Symposium on SNRs and NSs (Houston, Texas, October 10-19, 2002). To appear in Advances in Space Research (volume editors: Werner Becker and Wim Hermsen

    HEXTE Studies of Sco X-1 Spectra: Detections of Hard X-Ray Tails Beyond 200 keV

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    Using the HEXTE experiment on-board the RXTE satellite, we performed a search for hard X-ray tails in Sco X-1 spectra. We found strong evidence for the presence of such a non-thermal component on several occasions. Using the PCA/RXTE we were able to track the position of the source along the Z diagram, and we observed that the presence of the hard X-ray tail is not confined to a particular region. However, we found a correlation between the power law index of the non-thermal component and the position of the source in the Z diagram, suggesting that the hard X-ray spectrum (i.e., E > 50 keV) becomes flatter as the mass accretion rate increases. We were also able to study the temporal variation of the appearance/absence of the hard X-ray component. With our derived luminosities, we were also able to test the idea that X-ray luminosities can be used to distinguish between X-ray binary systems containing neutron stars and black holes.Comment: 6 pages, 2 figures; Presented at the 33rd COSPAR Scientific Assembly (Warsaw, Poland, 2000 July); Accepted for publication in Advances in Space Researc

    Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

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    The class Dothideomycetes is one of the largest groups of fungi with a high level of ecological diversity including many plant pathogens infecting a broad range of hosts. Here, we compare genome features of 18 members of this class, including 6 necrotrophs, 9 (hemi)biotrophs and 3 saprotrophs, to analyze genome structure, evolution, and the diverse strategies of pathogenesis. The Dothideomycetes most likely evolved from a common ancestor more than 280 million years ago. The 18 genome sequences differ dramatically in size due to variation in repetitive content, but show much less variation in number of (core) genes. Gene order appears to have been rearranged mostly within chromosomal boundaries by multiple inversions, in extant genomes frequently demarcated by adjacent simple repeats. Several Dothideomycetes contain one or more gene-poor, transposable element (TE)-rich putatively dispensable chromosomes of unknown function. The 18 Dothideomycetes offer an extensive catalogue of genes involved in cellulose degradation, proteolysis, secondary metabolism, and cysteine-rich small secreted proteins. Ancestors of the two major orders of plant pathogens in the Dothideomycetes, the Capnodiales and Pleosporales, may have had different modes of pathogenesis, with the former having fewer of these genes than the latter. Many of these genes are enriched in proximity to transposable elements, suggesting faster evolution because of the effects of repeat induced point (RIP) mutations. A syntenic block of genes, including oxidoreductases, is conserved in most Dothideomycetes and upregulated during infection in L. maculans, suggesting a possible function in response to oxidative stress

    A worldwide perspective on the management and control of Dothistroma needle blight

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    Dothistroma needle blight (DNB) caused by Dothistroma septosporum and Dothistroma pini is a damaging disease of pine in many countries. The disease led to the abandonment of planting susceptible Pinus species in parts of Africa, Asia, Australasia, Europe and North America. Although the disease can be effectively controlled using copper fungicides, this chemical is only routinely applied in forests in New Zealand and Australia. Other management tactics aimed at making conditions less favourable for disease development, such as thinning or pruning, may be effective on some, but not all, sites. Disease avoidance, by planting non-susceptible species, is the most common form of management in Europe, along with deployment of hosts with strong disease resistance. Although D. septosporum is present almost everywhere Pinus is grown, it is important that an effort is maintained to exclude introductions of new haplotypes that could increase virulence or enable host resistance to be overcome. A global strategy to exclude new introductions of Dothistroma and other damaging forest pathogens, facilitated by collaborative programmes and legislation, is needed.This study was partially supported by the EU COST Action FP1102 DIAROD (Determining Invasiveness and Risk of Dothistroma, http:// www.cost.eu/COST_Actions/fps/FP1102)http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1439-03292017-10-31hb2017Forestry and Agricultural Biotechnology Institute (FABI)GeneticsPlant Scienc

    Factors affecting body temperatures of toads

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    Factors influencing levels and rates of variation of body temperature ( T b ) in montane Bufo boreas boreas and in lowland Bufo boreas halophilus were investigated as an initial step toward understanding the role of natural thermal variation in the physiology and energetics of these ectothermic animals. Body temperatures of boreas can vary 25–30° C over 24-h periods. Such variation is primarily due to both nocturnal and diurnal activity and the physical characteristics of the montane environment. Bufo boreas halophilus are primarily nocturnal except during breeding and are voluntarily active at body temperatures ranging between 10 and 25° C. Despite variation in T b encountered in the field, boreas select a narrow range of T b in a thermal gradient, averaging 23.5 and 26.2° C for fasted individuals maintained under field conditions or acclimated to 20° C, respectively. In a thermal gradient the mean T b of fasted halophilus acclimated to 20° C is 23.9° C. Skin color of boreas varies in the field from very dark to light. The dark skins absorb approximately 4% more radiation than the light ones. Light colored boreas should absorb approximately 5% more radiation than similarly colored halophilus . Evaporative water losses increase directly with skin temperatures and vapor pressure deficit in both subspecies. Larger individuals heat and cool more slowly than smaller ones. Calculation of an enery budget for boreal toads suggests that they could sit in direct sunlight for long periods without fatally overheating, providing the skin was continually moist.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/47722/1/442_2004_Article_BF00344732.pd

    WHO global research priorities for antimicrobial resistance in human health

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    The WHO research agenda for antimicrobial resistance (AMR) in human health has identified 40 research priorities to be addressed by the year 2030. These priorities focus on bacterial and fungal pathogens of crucial importance in addressing AMR, including drug-resistant pathogens causing tuberculosis. These research priorities encompass the entire people-centred journey, covering prevention, diagnosis, and treatment of antimicrobial-resistant infections, in addition to addressing the overarching knowledge gaps in AMR epidemiology, burden and drivers, policies and regulations, and awareness and education. The research priorities were identified through a multistage process, starting with a comprehensive scoping review of knowledge gaps, with expert inputs gathered through a survey and open call. The priority setting involved a rigorous modified Child Health and Nutrition Research Initiative approach, ensuring global representation and applicability of the findings. The ultimate goal of this research agenda is to encourage research and investment in the generation of evidence to better understand AMR dynamics and facilitate policy translation for reducing the burden and consequences of AMR
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