Corruption and Higher Education- Reform Approach

Presented herein is a critique and meticulous diagnosis of the law, bylaws and regulations of the higher education system in Jordan. An Approach to reform the system is proposed based on experiences in many western universities. Conclusions have been drawn to implement the proposed approach. Keywords: higher education reform, corruption, democracy, equal opportunity act

High visibility on-chip quantum interference of single surface plasmons

Quantum photonic integrated circuits (QPICs) based on dielectric waveguides have been widely used in linear optical quantum computation. Recently, surface plasmons have been introduced to this application because they can confine and manipulate light beyond the diffraction limit. In this study, the on-chip quantum interference of two single surface plasmons was achieved using dielectric-loaded surface-plasmon-polariton waveguides. The high visibility (greater than 90%) proves the bosonic nature of single plasmons and emphasizes the feasibility of achieving basic quantum logic gates for linear optical quantum computation. The effect of intrinsic losses in plasmonic waveguides with regard to quantum information processing is also discussed. Although the influence of this effect was negligible in the current experiment, our studies reveal that such losses can dramatically reduce quantum interference visibility in certain cases; thus, quantum coherence must be carefully considered when designing QPIC devices.Comment: 6 pages, 4 figure

Biomass Accumulation and Carbon Sequestration in Four Different Aged Casuarina equisetifolia Coastal Shelterbelt Plantations in South China

Thousands of kilometers of shelterbelt plantations of Casuarina equisetifolia have been planted to protect the southeast coastline of China. These plantations also play an important role in the regional carbon (C) cycling. In this study, we examined plant biomass increment and C accumulation in four different aged C. equisetifolia plantations in sandy beaches in South China. The C accumulated in the C. equisetifolia plant biomass increased markedly with stand age. The annual rate of C accumulation in the C. equisetifolia plant biomass during 0-3, 3-6, 6-13 and 13-18 years stage was 2.9, 8.2, 4.2 and 1.0 Mg C ha(-1) yr(-1), respectively. Soil organic C (SOC) at the top 1 m soil layer in these plantations was 17.74, 5.14, 6.93, and 11.87 Mg C ha(-1), respectively, with SOC density decreasing with increasing soil depth. Total C storage in the plantation ecosystem averaged 26.57, 38.50, 69.78, and 79.79 Mg C ha(-1) in the 3, 6, 13 and 18-yrs plantation, with most of the C accumulated in the aboveground biomass rather than in the belowground root biomass and soil organic C. Though our results suggest that C. equisetifolia plantations have the characteristics of fast growth, high biomass accumulation, and the potential of high C sequestration despite planting in poor soil conditions, the interactive effects of soil condition, natural disturbance, and human policies on the ecosystem health of the plantation need to be further studied to fully realize the ecological and social benefits of the C equisetifolia shelterbelt forests in South China

Hantavirus Infections in Humans and Animals, China

Hemorrhagic fever with renal syndrome is a serious public health problem in China

Regulation of proliferating cell nuclear antigen ubiquitination in mammalian cells

After exposure to DNA-damaging agents that block the progress of the replication fork, monoubiquitination of proliferating cell nuclear antigen (PCNA) mediates the switch from replicative to translesion synthesis DNA polymerases. We show that in human cells, PCNA is monoubiquitinated in response to methyl methanesulfonate and mitomycin C, as well as UV light, albeit with different kinetics, but not in response to bleomycin or camptothecin. Cyclobutane pyrimidine dimers are responsible for most of the PCNA ubiquitination events after UV-irradiation. Failure to ubiquitinate PCNA results in substantial sensitivity to UV and methyl methanesulfonate, but not to camptothecin or bleomycin. PCNA ubiquitination depends on Replication Protein A (RPA), but is independent of ATR-mediated checkpoint activation. After UV-irradiation, there is a temporal correlation between the disappearance of the deubiquitinating enzyme USP1 and the presence of PCNA ubiquitination, but this correlation was not found after chemical mutagen treatment. By using cells expressing photolyases, we are able to remove the UV lesions, and we show that PCNA ubiquitination persists for many hours after the damage has been removed. We present a model of translesion synthesis behind the replication fork to explain the persistence of ubiquitinated PCNA

The Cipher Code of Simple Sequence Repeats in "Vampire Pathogens"

Blood inside mammals is a forbidden area for the majority of prokaryotic microbes; however, red blood cells tropism microbes, like "vampire pathogens" (VP), succeed in matching scarce nutrients and surviving strong immunity reactions. Here, we found VP of Mycoplasma, Rhizobiales, and Rickettsiales showed significantly higher counts of (AG) dimeric simple sequence repeats (Di-SSRs) in the genomes, coding and non-coding regions than non Vampire Pathogens (N_VP). Regression analysis indicated a significant correlation between GC content and the span of (AG)-Di-SSR variation. Gene Ontology (GO) terms with abundance of (AG)-Di-SSRs shared by the VP strains were associated with purine nucleotide metabolism (FDR < 0.01), indicating an adaptation to the limited availability of purine and nucleotide precursors in blood. Di-amino acids coded by (AG)-Di-SSRs included all three six-fold code amino acids (Arg, Leu and Ser) and significantly higher counts of Di-amino acids coded by (AG), (GA), and (TC) in VP than N_VP. Furthermore, significant differences (P < 0.001) on the numbers of triplexes formed from (AG)-Di-SSRs between VP and N_VP in Mycoplasma suggested the potential role of (AG)-Di-SSRs in gene regulation

A Robust and Powerful Set-Valued Approach to Rare Variant Association Analyses of Secondary Traits in Case-Control Sequencing Studies

In many case-control designs of genome-wide association (GWAS) or next generation sequencing (NGS) studies, extensive data on secondary traits that may correlate and share the common genetic variants with the primary disease are available. Investigating these secondary traits can provide critical insights into the disease etiology or pathology, and enhance the GWAS or NGS results. Methods based on logistic regression (LG) were developed for this purpose. However, for the identification of rare variants (RVs), certain inadequacies in the LG models and algorithmic instability can cause severely inflated type I error, and significant loss of power, when the two traits are correlated and the RV is associated with the disease, especially at stringent significance levels. To address this issue, we propose a novel set-valued (SV) method that models a binary trait by dichotomization of an underlying continuous variable, and incorporate this into the genetic association model as a critical component. Extensive simulations and an analysis of seven secondary traits in a GWAS of benign ethnic neutropenia show that the SV method consistently controls type I error well at stringent significance levels, has larger power than the LG-based methods, and is robust in performance to effect pattern of the genetic variant (risk or protective), rare or common variants, rare or common diseases, and trait distributions. Because of the SV method’s striking and profound advantage, we strongly recommend the SV method be employed instead of the LG-based methods for secondary traits analyses in case-control sequencing studies

Foliar phosphorus fractions reveal how tropical plants maintain photosynthetic rates despite low soil phosphorus availability

Nitrogen (N) and phosphorus (P) are essential nutrients for plant metabolism, and their availability often limits primary productivity. Whereas the effects of N availability on photosynthetic capacity are well established, we still know relatively little about the effects of P availability at a foliar level, especially in P‐limited tropical forests. We examined photosynthetic capacity, leaf mass per area (LMA) and foliar P fractions in five woody plant species after 6 years of N and P fertilization in a lowland tropical forest. Foliar N:P ratios indicated P limitation of the unfertilized plants; accordingly, photosynthetic P‐use efficiency (PPUE) and LMA decreased with P addition, and foliar N and P concentrations increased, whereas N addition had little effect on measured foliar traits. However, P addition enhanced photosynthetic capacity only in one species and not in other four species. We then assessed plant acclimation to low P availability by quantifying four fractions of foliar P representing different functional pools: structural P, metabolic P (including inorganic P), nucleic acid P, and residual P. We found that P addition enhanced the concentrations of metabolic, structural, and nucleic acid P fractions in all species, but the magnitude of the effect was species‐specific. Our findings indicate that tropical species acclimate to low P availability by altering allocation of foliar P to meet the demand of P for photosynthesis. Importantly, species typical of lowland tropical forests in East Asia maintained their photosynthetic rate under low P availability. We conclude that P limitation of leaf photosynthetic capacity may not be as common as previously assumed due to plant acclimation mechanisms in low‐P tropical forests. Species‐specific strategies to allocate P to different foliar fractions represent a potentially important adaptive mechanism for plants in P‐limited systems

Positive roles of SAS2 in DNA replication and transcriptional silencing in yeast

Sas2p is a histone acetyltransferase implicated in the regulation of transcriptional silencing, and ORC is the six-subunit origin recognition complex involved in the initiation of DNA replication and the establishment of transcriptionally silent chromatin by silencers in yeast. We show here that SAS2 deletion (sas2Δ) exacerbates the temperature sensitivity of the ORC mutants orc2-1 and orc5-1. Moreover, sas2Δ and orc2-1 have a synthetic effect on cell cycle progression through S phase and initiation of DNA replication. These results suggest that SAS2 plays a positive role in DNA replication and cell cycle progression. We also show that sas2Δ and orc5-1 have a synthetic effect on transcriptional silencing at the HMR locus. Moreover, we demonstrate that sas2Δ reduces the silencing activities of silencers regardless of their locations and contexts, indicating that SAS2 plays a positive role in silencer function. In addition, we show that SAS2 is required for maintaining the structure of transcriptionally silent chromatin