10 research outputs found

    From Flop to Megaflops: Java for Technical Computing

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    this article we show how optimizing array bounds checks and null pointer checks creates loop nests on which aggressive optimizations can be used. Applying these optimizations by hand to a simple matrix-multiply test case leads to Java-compliant programs whose performance is in excess of 500 Mflops on a four-processor 332MHz RS/6000 model F50 computer. We also report in this article the effect that various optimizations have on the performance of six floating-point-intensive benchmarks. Through these optimizations we have been able to achieve with Java at least 80% of the peak Fortran performance on the same benchmarks. Since all of these optimizations can be automated, we conclude that Java will soon be a serious contender for numerically intensive computing

    Applications of Hydrogen/Deuterium Exchange MS from 2012 to 2014

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    Mass Spectrometry Methods for Studying Structure and Dynamics of Biological Macromolecules

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