Owls as bioindicators: their spatial and temporal aspects in Eastern Europe

The article presents the unique results of a study of the spatial distribution of owls in the territory of the Republic of Tatarstan by season of the year on long-term data. Ravkin’s transect method was used to census fixed randomly selected plots spread over a large geographic area. Abundance a lot of species of owls strong changed of different seasons of the year. In general, owls were indifferent to latitudinal, longitudinal, and altitude gradients in the territory of the Republic of Tatarstan, especially in winter and autumn periods. Probability of occurrences of boreal and pygmy owls can be used as indicators of the biological diversity of forest ecosystems in winter period

The role of climate change and food supply on winter populations of seed-eating birds

We studied the populations of four seed-eating bird species throughout the winter during a 30-year study in the forests of the Tatarstan Republic, Russia. Numbers of all species fluctuated from year-to-year by several orders of magnitude but with a significant underlying trend for increased numbers associated with rising temperatures and a greater food supply. We question whether the traditional view that such birds move further south only after exhausting the food supply is too simplistic. We believe that the severity of winter, or lack of it, is highly influential on the mortality and movements of these characteristic birds of the boreal forest zone

East versus West: Contrasts in phenological patterns?

Aim To examine whether change in the timing of a large number of phenological events and their response to temperature differs between trophic levels during the period 1988-2008.Location In the vicinity of Kazan, Tatarstan Republic, Russia (55°45' N, 49°08' E).Methods Observations of the dates of first events of 22 plant phases, 8 insect phases, 3 herpetofauna phases and 26 migrant bird phases were examined using regression to assess changes over time and response to temperature. Differences between trophic levels were assessed using ANOVA.Results In comparison to studies from western Europe, relatively few phenological series (15) revealed a significant advance over time, but a much larger number (37), including all the herpetofauna and nearly all the plants, showed a response to temperature. Trends in birds were, on average, twice as great as those for plants, but plants had a significantly greater temperature response. Over the study period local temperatures had not risen significantly but some phenological change was still evident.Main conclusions Phenological change has been less marked in the eastern edge of Europe than in western and central Europe. This is compatible with a lack of significant local warming during the study period. A large number of species show strong responses to temperature so will be expected to advance if/when local temperatures do increase. In contrast to results from elsewhere in Europe, early events were not the most temperature responsive, suggesting local adaptation preventing precocious behaviour and the consequent dangers of sub-zero temperatures. © 2010 Blackwell Publishing Ltd

New Archaeozoological Studies of Medieval Bilyar

The paper discusses a new study of fi sh and bird remains from excavation XLIV of Bilyar fortifi ed settlement, founded in order to study a large brick building located in the so-called “Inner City” – the part of the settlement with the highest status. The aim of the study was a comprehensive analysis of faunal remains extracted from the cultural layer using the method of layer-by-layer sampling and sieving. On the basis of bone remains and scales, a total 23 fi sh species were identifi ed with predominant remains of large species: Starred sturgeon, Zander, Sterlet and Whitefi sh. The predominance of large species indicates that fi shery was practiced on the Volga and Kama rivers, and the bulk of the fi sh consumed at the site was imported. The species composition of birds is high and diverse – 40 species of wild and 3 species of domestic birds with predominant domestic chicken. Of interest among wild birds are the finds of skeleton fragments of the birds of prey of the Accipitriformes and Falconiformes order, which indicates the presence of falconry in the area, and its high social status

Ancient chicken remains reveal the origins of virulence in Marek’s disease virus

The pronounced growth in livestock populations since the 1950s has altered the epidemiological and evolutionary trajectory of their associated pathogens. For example, Marek’s disease virus (MDV), which causes lymphoid tumors in chickens, has experienced a marked increase in virulence over the past century. Today, MDV infections kill >90% of unvaccinated birds, and controlling it costs more than US$1 billion annually. By sequencing MDV genomes derived from archeological chickens, we demonstrate that it has been circulating for at least 1000 years. We functionally tested the Meq oncogene, one of 49 viral genes positively selected in modern strains, demonstrating that ancient MDV was likely incapable of driving tumor formation. Our results demonstrate the power of ancient DNA approaches to trace the molecular basis of virulence in economically relevant pathogens

Ancient chicken remains reveal the origins of virulence in Marek's disease virus

This is the author accepted manuscript. The final version is available from the American Association for the Advancement of Science via the DOI in this recordData and materials availability: All MDV sequence data generated have been deposited in GenBank under accession PRJEB64489. Code is available at GitHub (https://github.com/antonisdim/MDV) and archived at Zenodo (https://zenodo.org/records/10022436) (25).The pronounced growth in livestock populations since the 1950s has altered the epidemiological and evolutionary trajectory of their associated pathogens. For example, Marek's disease virus (MDV), which causes lymphoid tumors in chickens, has experienced a marked increase in virulence over the past century. Today, MDV infections kill >90% of unvaccinated birds, and controlling it costs more than US$1 billion annually. By sequencing MDV genomes derived from archeological chickens, we demonstrate that it has been circulating for at least 1000 years. We functionally tested the Meq oncogene, one of 49 viral genes positively selected in modern strains, demonstrating that ancient MDV was likely incapable of driving tumor formation. Our results demonstrate the power of ancient DNA approaches to trace the molecular basis of virulence in economically relevant pathogens.European Research Council (ERC)Wellcome TrustOxford Martin School Pandemic Genomics ProgrammeArts and Humanities Research Council (AHRC)European Union Horizon 2020Biotechnology and Biological Sciences Research Council (BBSRC)Research Foundation–Flanders (Fonds voor Wetenschappelijk Onderzoek

Ancient chicken remains reveal the origins of virulence in Marek’s 2 disease virus

The dramatic growth in livestock populations since the 1950s has altered the epidemiological and evolutionary trajectory of their associated pathogens. For example, Marek’s disease virus (MDV), which causes lymphoid tumors in chickens, has experienced a marked increase in virulence over the last century. Today, MDV infections kill >90% of unvaccinated birds and controlling it costs >US$1bn annually. By sequencing MDV genomes derived from archeological chickens, we demonstrate that it has been circulating for at least 1000 years. We functionally tested the Meq oncogene, one of 49 viral genes positively selected in modern strains, demonstrating that ancient MDV was likely incapable of driving tumor formation. Our results demonstrate the power of ancient DNA approaches to trace the molecular basis of virulence in economically relevant pathogens

Food web de-synchronization in England's largest lake: an assessment based on multiple phenological metrics

Phenological changes have been observed globally for marine, freshwater and terrestrial species, and are an important element of the global biological ‘fingerprint’ of climate change. Differences in rates of change could desynchronize seasonal species interactions within a food web, threatening ecosystem functioning. Quantification of this risk is hampered by the rarity of long-term data for multiple interacting species from the same ecosystem and by the diversity of possible phenological metrics, which vary in their ecological relevance to food web interactions. We compare phenological change for phytoplankton (chlorophyll a), zooplankton (Daphnia) and fish (perch, Perca fluviatilis) in two basins of Windermere over 40 years and determine whether change has differed among trophic levels, while explicitly accounting for among-metric differences in rates of change. Though rates of change differed markedly among the nine metrics used, seasonal events shifted earlier for all metrics and trophic levels: zooplankton advanced most, and fish least, rapidly. Evidence of altered synchrony was found in both lake basins, when combining information from all phenological metrics. However, comparisons based on single metrics did not consistently detect this signal. A multimetric approach showed that across trophic levels, earlier phenological events have been associated with increasing water temperature. However, for phytoplankton and zooplankton, phenological change was also associated with changes in resource availability. Lower silicate, and higher phosphorus, concentrations were associated with earlier phytoplankton growth, and earlier phytoplankton growth was associated with earlier zooplankton growth. The developing trophic mismatch detected between the dominant fish species in Windermere and important zooplankton food resources may ultimately affect fish survival and portend significant impacts upon ecosystem functioning.We advocate that future studies on phenological synchrony combine data from multiple phenological metrics, to increase confidence in assessments of change and likely ecological consequences

Spatiotemporal Variation in Avian Migration Phenology: Citizen Science Reveals Effects of Climate Change

A growing number of studies have documented shifts in avian migratory phenology in response to climate change, and yet there is a large amount of unexplained variation in the magnitude of those responses across species and geographic regions. We use a database of citizen science bird observations to explore spatiotemporal variation in mean arrival dates across an unprecedented geographic extent for 18 common species in North America over the past decade, relating arrival dates to mean minimum spring temperature. Across all species and geographic locations, species shifted arrival dates 0.8 days earlier for every °C of warming of spring temperature, but it was common for some species in some locations to shift as much as 3–6 days earlier per °C. Species that advanced arrival dates the earliest in response to warming were those that migrate more slowly, short distance migrants, and species with broader climatic niches. These three variables explained 63% of the interspecific variation in phenological response. We also identify a latitudinal gradient in the average strength of phenological response, with species shifting arrival earlier at southern latitudes than northern latitudes for the same degree of warming. This observation is consistent with the idea that species must be more phenologically sensitive in less seasonal environments to maintain the same degree of precision in phenological timing

Temporal shifts and temperature sensitivity of avian spring migratory phenology:A phylogenetic meta-analysis

There are wide reports of advances in the timing of spring migration of birds over time and in relation to rising temperatures, though phenological responses vary substantially within and among species. An understanding of the ecological, life-history and geographic variables that predict this intra- and interspecific variation can guide our projections of how populations and species are likely to respond to future climate change. Here, we conduct phylogenetic meta-analyses addressing slope estimates of the timing of avian spring migration regressed on (i) year and (ii) temperature, representing a total of 413 species across five continents. We take into account slope estimation error and examine phylogenetic, ecological and geographic predictors of intra- and interspecific variation. We confirm earlier findings that on average birds have significantly advanced their spring migration time by 2·1 days per decade and 1·2 days °C−1. We find that over time and in response to warmer spring conditions, short-distance migrants have advanced spring migratory phenology by more than long-distance migrants. We also find that larger bodied species show greater advance over time compared to smaller bodied species. Our results did not reveal any evidence that interspecific variation in migration response is predictable on the basis of species' habitat or diet. We detected a substantial phylogenetic signal in migration time in response to both year and temperature, suggesting that some of the shifts in migratory phenological response to climate are predictable on the basis of phylogeny. However, we estimate high levels of species and spatial variance relative to phylogenetic variance, which is consistent with plasticity in response to climate evolving fairly rapidly and being more influenced by adaptation to current local climate than by common descent. On average, avian spring migration times have advanced over time and as spring has become warmer. While we are able to identify predictors that explain some of the true among-species variation in response, substantial intra- and interspecific variation in migratory response remains to be explained