Saffron is a monomorphic species as revealed by RAPD, ISSR and microsatellite analyses

<p>Abstract</p> <p>Background</p> <p>Saffron (<it>Crocus sativus</it>) is considered the world's most expensive spice. Used mainly as a colorant for foodstuffs, it is highly appreciated for its aromatic and flavouring properties. Since no molecular markers for this species have been found in the literature, the objective of this study was to determine whether phenotypical differences found in <it>C. sativus </it>were supported by molecular analyses.</p> <p>Findings</p> <p>Thirty primers from Operon Technologies were used in random amplified polymorphic DNA (RAPD) analysis, forty eight primers were screened using intersimple sequence repeats (ISSR) method and fifteen primers derived from a microsatellites library flanking sequences with repeat motifs were assayed in forty three isolates of <it>C. sativus </it>from eleven different countries and a <it>C. kotschyanus </it>isolate was used as outgroup. No polymorphic bands were detected in any of the accessions combining the different approaches used in this study.</p> <p>Conclusion</p> <p>According to our findings, all accessions appear identical clones, not only because morphological characters but also at a molecular level. These data strongly suggested that <it>C. sativus </it>is a monomorphic species. Thus, genome sequencing is needed to find molecular markers for saffron.</p

Pathogenicity and genetic diversity of Fusarium oxysporum isolates from corms of Crocus sativus

a b s t r a c t Crocus sativus is a triploid sterile plant and autumnal flowering geophyte with corms. As a subterranean organ, the corm is susceptible to diseases caused by fungi, bacteria, nematodes and viruses. Fusarium corm rot incited by F. oxysporum is the most destructive disease in saffron, having caused severe yield losses in saffron producer&apos;s countries. Infected plants die off early, resulting in reduction of corm yield, quality and flower and stigma production. Little is known about the formae speciales attacking saffron and less about the relationship among the fungus and the possible hosts. In this study we investigate the formae speciales which colonize saffron and their relationship with some members of iridaceae such as C. vernus (ornamental crocus), gladiolus and narcissus using pathogenicity tests; we determine whether different pathogenic isolates of F. oxysporum can be distinguished by ISSR, and we analyze the genetic relationships and variability among some isolates of these pathogens. We found two formae speciales iridiacearum and croci which attack different iridaceous crops and Crocus sp., respectively and we suggested the creation of a new formae speciales saffrani which shows only pathogenicity on saffron corms. From ISSR analysis, the unweighted paired group method with arithmetic averages cluster analysis (UPGMA) was used to discriminate the F. oxysporum isolates, we were able to differentiate among f. sp. from saffron corms and other formae speciales of F. oxysporum but not among formae speciales iridiacearum, croci and saffrani. Furthermore, we searched for fum1, tri5, tri7 and tri13 genes using PCR assays, however, all the isolates from saffron corms were negative

Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production

[EN] Volatile compounds are the major determinants of aroma and flavor in both grapes and wine. In this study, we investigated the emission of volatile and non-volatile compounds during berry maturation in two grape varieties (Airen and Tempranillo) throughout 2010 and 2011. HS-SPME coupled to gas chromatography and mass spectrometry was applied for the identification and relative quantitation of these compounds. Principal component analysis was performed to search for variability between the two cultivars and evolution during 10 developmental stages. Results showed that there are distinct differences in volatile compounds between cultivars throughout fruit development. Early stages were characterized in both cultivars by higher levels of some apocarotenoids such as beta-cyclocitral or beta-ionone, terpenoids (E)-linalool oxide and (Z)-linalool oxide and several furans, while the final stages were characterized by the highest amounts of ethanol, benzenoid phenylacetaldehyde and 2-phenylethanol, branched-amino acid-derived 3-methylbutanol and 2-methylbutanol, and a large number of lipid derivatives. Additionally, we measured the levels of the different classes of volatile precursors by using liquid chromatography coupled to high resolution mass spectrometry. In both varieties, higher levels of carotenoid compounds were detected in the earlier stages, zeaxanthin and alpha-carotene were only detected in Airen while neoxanthin was found only in Tempranillo; more variable trends were observed in the case of the other volatile precursors. Furthermore, we monitored the expression of homolog genes of a set of transcripts potentially involved in the biosynthesis of these metabolites, such as some glycosyl hydrolases family 1, lipoxygenases, alcohol dehydrogenases hydroperoxide lyases, O-methyltransferases and carotenoid cleavage dioxygenases during the defined developmental stages. Finally, based on Pearson correlation analyses, we explored the metabolite-metabolite fluctuations within VOCs/precursors during the berry development; as well as tentatively linking the formation of some metabolites detected to the expression of some of these genes. Our data showed that the two varieties displayed a very different pattern of relationships regarding the precursor/volatile metabolite-metabolite fluctuations, being the lipid and the carotenoid metabolism the most distinctive between the two varieties. Correlation analysis showed a higher degree of overall correlation in precursor/volatile metabolite-metabolite levels in Airen, confirming the enriched aroma bouquet characteristic of the white varieties.We thank J. Argandona (Institute Botanico, Universidad de Castilla-La Mancha, Albacete, Spain) for excellent technical support, and K.A. Walsh for language revision. This work was supported by the "Junta de comunidades de Castilla-La Mancha" (JCCM) [PPII10-0062-7718] and benefited from the networking activities within the European Cooperation in Science and Technology Action CA15136 (EUROCAROTEN). GD was supported by short-term fellowships of the Quality Fruit (FA1106) European Cooperation in Science and Technology actions. OA was funded by FPCYTCLM through the INCRECYT Programme.Rambla Nebot, JL.; Trapero-Mozos, A.; Diretto, G.; Rubio-Moraga, A.; Granell Richart, A.; Gomez-Gomez, L.; Ahrazem, O. (2016). Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production. Frontiers in Plant Science. 7(1619):1-23. https://doi.org/10.3389/fpls.2016.01619S1237161

Fortification and bioaccessibility of saffron apocarotenoids in potato tubers

Carotenoids are C40 isoprenoids with well-established roles in photosynthesis, pollination, photoprotection, and hormone biosynthesis. The enzymatic or ROS-induced cleavage of carotenoids generates a group of compounds named apocarotenoids, with an increasing interest by virtue of their metabolic, physiological, and ecological activities. Both classes are used industrially in a variety of fields as colorants, supplements, and bio-actives. Crocins and picrocrocin, two saffron apocarotenoids, are examples of high-value pigments utilized in the food, feed, and pharmaceutical industries. In this study, a unique construct was achieved, namely O6, which contains CsCCD2L, UGT74AD1, and UGT709G1 genes responsible for the biosynthesis of saffron apocarotenoids driven by a patatin promoter for the generation of potato tubers producing crocins and picrocrocin. Different tuber potatoes accumulated crocins and picrocrocin ranging from 19.41–360 to 105–800 μg/g DW, respectively, with crocetin, crocin 1 [(crocetin-(β-D-glucosyl)-ester)] and crocin 2 [(crocetin)-(β-D-glucosyl)-(β-D-glucosyl)-ester)] being the main compounds detected. The pattern of carotenoids and apocarotenoids were distinct between wild type and transgenic tubers and were related to changes in the expression of the pathway genes, especially from PSY2, CCD1, and CCD4. In addition, the engineered tubers showed higher antioxidant capacity, up to almost 4-fold more than the wild type, which is a promising sign for the potential health advantages of these lines. In order to better investigate these aspects, different cooking methods were applied, and each process displayed a significant impact on the retention of apocarotenoids. More in detail, the in vitro bioaccessibility of these metabolites was found to be higher in boiled potatoes (97.23%) compared to raw, baked, and fried ones (80.97, 78.96, and 76.18%, respectively). Overall, this work shows that potatoes can be engineered to accumulate saffron apocarotenoids that, when consumed, can potentially offer better health benefits. Moreover, the high bioaccessibility of these compounds revealed that potato is an excellent way to deliver crocins and picrocrocin, while also helping to improve its nutritional value

Estrategia de diseño de un sistema integral de servicios de la Facultad de Ciencias de la Información

Este proyecto propone diseñar un sistema que integre la prestación de servicios que la facultad de Ciencias de la Información ofrece a PDI, PAS y estudiantes, en cuanto a la reserva de espacios, equipos e instalaciones de Laboratorios y recursos de la Facultad, así como la comunicación de todas las actividades, accesible desde múltiples plataformas (ordenador, tablet, móvil). El alcance del proyecto supone una mejora de la gestión de los procesos de seguimiento de los títulos oficiales de la Facultad, en cuyas Memorias, el apartado de infraestructuras y difusión, juega un papel relevante. Esta herramienta digital favorece la gestión en línea de los recursos necesarios para la docencia online

Crocins-rich tomato extracts showed enhanced protective effects in vitro

Crocins are high-value water soluble pigments that have long been recognized for their medicinal properties, and whose demand has increased worldwide in recent years. In the present study transgenic tomato fruits engineered for the production of crocins and hp3/Bsh tomato mutants with alterations in the carotenoid metabolism, have been combined to increase the levels of crocins in tomato fruits. Tomato fruits from F4 plants showed high antioxidant capacity and the crocin-rich juice of the produced tomato fruit was protected neuroblastoma cells against oxidative insult, through its ability to activate factor 2 related to nuclear erythroid factor 2 (Nrf2). The bio-accessibility of crocins in the juice showed values similar to the ones observed with saffron. Overall, our results support that crocin-fortified tomatoes could result in higher crocin availability and have additional health-promoting effects and could provide better protection against oxidative stress related chronic diseases in humans.This work was supported by grants BIO2016-77000-R, PID2020-114761RB-I00 from the Spanish Ministerio de Ciencia, Innovación y Universidades and SBPLY/17/180501/000234 and SBPLY/21/180501/000064 from the Junta de Comunidades de Castilla-La Mancha (co-financed European Union FEDER funds) and HARNESSTOM, contract number 101000716 Innovation Action EC-H2020-SFS-2020-1. GD and AG are participants of the European COST action CA18210 (ROXY).Peer reviewe

Genetic Diversity of Pinus nigra Arn. Populations in Southern Spain and Northern Morocco Revealed By Inter-Simple Sequence Repeat Profiles †

Eight Pinus nigra Arn. populations from Southern Spain and Northern Morocco were examined using inter-simple sequence repeat markers to characterize the genetic variability amongst populations. Pair-wise population genetic distance ranged from 0.031 to 0.283, with a mean of 0.150 between populations. The highest inter-population average distance was between PaCU from Cuenca and YeCA from Cazorla, while the lowest distance was between TaMO from Morocco and MA Sierra Mágina populations. Analysis of molecular variance (AMOVA) and Nei’s genetic diversity analyses revealed higher genetic variation within the same population than among different populations. Genetic differentiation (Gst) was 0.233. Cuenca showed the highest Nei’s genetic diversity followed by the Moroccan region, Sierra Mágina, and Cazorla region. However, clustering of populations was not in accordance with their geographical locations. Principal component analysis showed the presence of two major groups—Group 1 contained all populations from Cuenca while Group 2 contained populations from Cazorla, Sierra Mágina and Morocco—while Bayesian analysis revealed the presence of three clusters. The low genetic diversity observed in PaCU and YeCA is probably a consequence of inappropriate management since no estimation of genetic variability was performed before the silvicultural treatments. Data indicates that the inter-simple sequence repeat (ISSR) method is sufficiently informative and powerful to assess genetic variability among populations of P. nigra