Evaluation of halitosis and sialometry in patients submitted to head and neck radiotherapy

Objectives: The aim of this study was to investigate the parameters of halitosis and sialometry in patients who had undergone head and neck radiotherapy, correlating oral concentration of volatile sulfur compounds (VSC) with the presence of tongue coating, salivary flow rate and BANA test. Material and Methods: 35 patients allocated in two groups were examined: group I (control) - patients with systemic and oral health; group II - patients submitted to head and neck radiotherapy. All volunteers were submitted to halitosis measurements through a sulphide monitor, evaluation of tongue coating weight, non-stimulated sialometry and BANA test. Results: The results were analyzed through analysis of variance, Pearson?s correlation and Student?s t-test, showing that there was statistically significant difference in halimetry between the groups, where the irradiated patients showed halitosis. There was a relation between the presence of tongue coating and the levels of VSCs in both groups and it was also noted that the irradiated patients showed a decreased salivary flow rate compared to healthy patients. Conclusion: On the conditions of the present research, it was concluded that halitosis can be considered an adverse effect of radiotherapy, connected to hiposalivation and poor oral health

MAMMALS IN PORTUGAL : A data set of terrestrial, volant, and marine mammal occurrences in P ortugal

Mammals are threatened worldwide, with 26% of all species being includedin the IUCN threatened categories. This overall pattern is primarily associatedwith habitat loss or degradation, and human persecution for terrestrial mam-mals, and pollution, open net fishing, climate change, and prey depletion formarine mammals. Mammals play a key role in maintaining ecosystems func-tionality and resilience, and therefore information on their distribution is cru-cial to delineate and support conservation actions. MAMMALS INPORTUGAL is a publicly available data set compiling unpublishedgeoreferenced occurrence records of 92 terrestrial, volant, and marine mam-mals in mainland Portugal and archipelagos of the Azores and Madeira thatincludes 105,026 data entries between 1873 and 2021 (72% of the data occur-ring in 2000 and 2021). The methods used to collect the data were: live obser-vations/captures (43%), sign surveys (35%), camera trapping (16%),bioacoustics surveys (4%) and radiotracking, and inquiries that represent lessthan 1% of the records. The data set includes 13 types of records: (1) burrowsjsoil moundsjtunnel, (2) capture, (3) colony, (4) dead animaljhairjskullsjjaws, (5) genetic confirmation, (6) inquiries, (7) observation of live animal (8),observation in shelters, (9) photo trappingjvideo, (10) predators dietjpelletsjpine cones/nuts, (11) scatjtrackjditch, (12) telemetry and (13) vocalizationjecholocation. The spatial uncertainty of most records ranges between 0 and100 m (76%). Rodentia (n=31,573) has the highest number of records followedby Chiroptera (n=18,857), Carnivora (n=18,594), Lagomorpha (n=17,496),Cetartiodactyla (n=11,568) and Eulipotyphla (n=7008). The data setincludes records of species classified by the IUCN as threatened(e.g.,Oryctolagus cuniculus[n=12,159],Monachus monachus[n=1,512],andLynx pardinus[n=197]). We believe that this data set may stimulate thepublication of other European countries data sets that would certainly contrib-ute to ecology and conservation-related research, and therefore assisting onthe development of more accurate and tailored conservation managementstrategies for each species. There are no copyright restrictions; please cite thisdata paper when the data are used in publications.info:eu-repo/semantics/publishedVersio

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear un derstanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5–7 vast areas of the tropics remain understudied.8–11 In the American tropics, Amazonia stands out as the world’s most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepre sented in biodiversity databases.13–15 To worsen this situation, human-induced modifications16,17 may elim inate pieces of the Amazon’s biodiversity puzzle before we can use them to understand how ecological com munities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple or ganism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region’s vulnerability to environmental change. 15%–18% of the most ne glected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lostinfo:eu-repo/semantics/publishedVersio

Mammals in Portugal: a data set of terrestrial, volant, and marine mammal occurrences in Portugal

Mammals are threatened worldwide, with ~26% of all species being included in the IUCN threatened categories. This overall pattern is primarily associated with habitat loss or degradation, and human persecution for terrestrial mammals, and pollution, open net fishing, climate change, and prey depletion for marine mammals. Mammals play a key role in maintaining ecosystems functionality and resilience, and therefore information on their distribution is crucial to delineate and support conservation actions. MAMMALS IN PORTUGAL is a publicly available data set compiling unpublished georeferenced occurrence records of 92 terrestrial, volant, and marine mammals in mainland Portugal and archipelagos of the Azores and Madeira that includes 105,026 data entries between 1873 and 2021 (72% of the data occurring in 2000 and 2021). The methods used to collect the data were: live observations/captures (43%), sign surveys (35%), camera trapping (16%), bioacoustics surveys (4%) and radiotracking, and inquiries that represent less than 1% of the records. The data set includes 13 types of records: (1) burrows | soil mounds | tunnel, (2) capture, (3) colony, (4) dead animal | hair | skulls | jaws, (5) genetic confirmation, (6) inquiries, (7) observation of live animal (8), observation in shelters, (9) photo trapping | video, (10) predators diet | pellets | pine cones/nuts, (11) scat | track | ditch, (12) telemetry and (13) vocalization | echolocation. The spatial uncertainty of most records ranges between 0 and 100 m (76%). Rodentia (n =31,573) has the highest number of records followed by Chiroptera (n = 18,857), Carnivora (n = 18,594), Lagomorpha (n = 17,496), Cetartiodactyla (n = 11,568) and Eulipotyphla (n = 7008). The data set includes records of species classified by the IUCN as threatened (e.g., Oryctolagus cuniculus [n = 12,159], Monachus monachus [n = 1,512], and Lynx pardinus [n = 197]). We believe that this data set may stimulate the publication of other European countries data sets that would certainly contribute to ecology and conservation-related research, and therefore assisting on the development of more accurate and tailored conservation management strategies for each species. There are no copyright restrictions; please cite this data paper when the data are used in publications

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear understanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5,6,7 vast areas of the tropics remain understudied.8,9,10,11 In the American tropics, Amazonia stands out as the world's most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepresented in biodiversity databases.13,14,15 To worsen this situation, human-induced modifications16,17 may eliminate pieces of the Amazon's biodiversity puzzle before we can use them to understand how ecological communities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple organism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region's vulnerability to environmental change. 15%–18% of the most neglected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lost

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear understanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5,6,7 vast areas of the tropics remain understudied.8,9,10,11 In the American tropics, Amazonia stands out as the world's most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepresented in biodiversity databases.13,14,15 To worsen this situation, human-induced modifications16,17 may eliminate pieces of the Amazon's biodiversity puzzle before we can use them to understand how ecological communities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple organism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region's vulnerability to environmental change. 15%–18% of the most neglected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lost

Evaluation of matrix metalloproteinases 2 and 9 and CD31 immune staining in squamous cell carcinomas of the floor of the mouth

Avaliar a expressão das MMPs 2 e 9 e CD31 por meio de imunoistoquímica em carcinomas espoinocelulares de soalho bucal, e correlacionar os resultados com variáveis demográficas, estadiamento tumoral TNM, parâmetros microscópicos, como invasão perineural, embolização, grau de diferenciação tumoral, e sobrevida. Material e métodos: dados de prontuários de 41 pacientes foram coletados e o diagnóstico histopatológico foi revisado com lâminas recém preparadas. Seções de 5 m foram montadas em lâminas silanizadas e submetidas à imunomarcação pelo sistema streptoavidina-biotina utilizando os anticorpos anti MMP2, MMP 9 e CD31 humanos. A presença de imunomarcação das MMPs foi quantificada utilizando um retículo com 100 pontos em 20 campos de cada lâmina obtidos com objetiva de 40x. Os vasos foram identificados pela imunomarcação com anti-CD31 contando-se aqueles que apresentavam lumem e e tamanho menor do que 50m em cinco campos (objetiva de 20x) na área de maior vascularização das lesões. Para verificar a associação entre as variáveis numéricas e os marcadores, o teste não paramétrico U de Mann-Whitney foi utilizado e, em tabelas de contingência, o teste de freqüências do qui-quadrado foi aplicado. O teste exato de Fisher foi adotado quando pelo menos uma freqüência esperada foi menor do que 5 em tabelas 2X2. O Método de Kaplan-Meier foi utilizado para estimar as probabilidades de sobrevida global e o teste de logrank para comparar as curvas de sobrevida. O nível de significância de 5% foi adotado para todos os testes estatísticos. Resultados: houve correlação estatisticamente significante entre marcação para MMP 2 e metástase em linfonodo. Os fatores relacionados negativamente com a sobrevida foram estadiamento N, tipo histológico, invasão neural e marcação de MMP 9. Conclusão: a intensidade de imunomarcação de MMP 2 e MMP9 pode ser indicativa de metástase em linfonodo e menor probabilidade de sobrevida, respectivamente.Compare the expression of MMPs 2 and 9 and CD31 by the use of immune histochemistry, in squamous cell carcinomas of the floor of the mouth, and obtain the relationship between those markers and demographic aspects, TNM stage, nerve invasion, blood vessel intravasation, degree of tumor differentiation and survival rates. Material and methods: data from 41 patients were reviewed. Tissue sections with 5 m were mounted in silanized glasses, and submmited to immune staining by the streptoavidin-biotin method, using the anti MMP2, MMP 9 and CD31 human antibodies. The presence of staining was quantified in a 100 points grade in 20 fields of each lesion, with a 40X magnification. Blood vessels smaller than 50m that were identified with the CD31 were counted in 5 fields of the hot spot area of the tumor. To verify the association between immune staining and numerical variables, the non parametric Mann-Whitney U test was used, and the chi-square test was verified. The exact Fisher test was adopted when at least one of the expected frequencies in 2X2 tables was less than 5. The Kaplan-Meier method was used to estimate the probabilities of global survival, and the log-rank test was used to compare the survival curves. Results: there was statistically significant association between MMP 2 immune staining and regional metastasis. The variables associated with poor survival rates were N stage, histological grade, nerve invasion and immune staining for MMP 9. Conclusion: the grade of immune staining can be an indicative of node metastasis and poor survival rate, respectively

Evaluation of matrix metalloproteinases 2 and 9 and CD31 immune staining in squamous cell carcinomas of the floor of the mouth

Avaliar a expressão das MMPs 2 e 9 e CD31 por meio de imunoistoquímica em carcinomas espoinocelulares de soalho bucal, e correlacionar os resultados com variáveis demográficas, estadiamento tumoral TNM, parâmetros microscópicos, como invasão perineural, embolização, grau de diferenciação tumoral, e sobrevida. Material e métodos: dados de prontuários de 41 pacientes foram coletados e o diagnóstico histopatológico foi revisado com lâminas recém preparadas. Seções de 5 m foram montadas em lâminas silanizadas e submetidas à imunomarcação pelo sistema streptoavidina-biotina utilizando os anticorpos anti MMP2, MMP 9 e CD31 humanos. A presença de imunomarcação das MMPs foi quantificada utilizando um retículo com 100 pontos em 20 campos de cada lâmina obtidos com objetiva de 40x. Os vasos foram identificados pela imunomarcação com anti-CD31 contando-se aqueles que apresentavam lumem e e tamanho menor do que 50m em cinco campos (objetiva de 20x) na área de maior vascularização das lesões. Para verificar a associação entre as variáveis numéricas e os marcadores, o teste não paramétrico U de Mann-Whitney foi utilizado e, em tabelas de contingência, o teste de freqüências do qui-quadrado foi aplicado. O teste exato de Fisher foi adotado quando pelo menos uma freqüência esperada foi menor do que 5 em tabelas 2X2. O Método de Kaplan-Meier foi utilizado para estimar as probabilidades de sobrevida global e o teste de logrank para comparar as curvas de sobrevida. O nível de significância de 5% foi adotado para todos os testes estatísticos. Resultados: houve correlação estatisticamente significante entre marcação para MMP 2 e metástase em linfonodo. Os fatores relacionados negativamente com a sobrevida foram estadiamento N, tipo histológico, invasão neural e marcação de MMP 9. Conclusão: a intensidade de imunomarcação de MMP 2 e MMP9 pode ser indicativa de metástase em linfonodo e menor probabilidade de sobrevida, respectivamente.Compare the expression of MMPs 2 and 9 and CD31 by the use of immune histochemistry, in squamous cell carcinomas of the floor of the mouth, and obtain the relationship between those markers and demographic aspects, TNM stage, nerve invasion, blood vessel intravasation, degree of tumor differentiation and survival rates. Material and methods: data from 41 patients were reviewed. Tissue sections with 5 m were mounted in silanized glasses, and submmited to immune staining by the streptoavidin-biotin method, using the anti MMP2, MMP 9 and CD31 human antibodies. The presence of staining was quantified in a 100 points grade in 20 fields of each lesion, with a 40X magnification. Blood vessels smaller than 50m that were identified with the CD31 were counted in 5 fields of the hot spot area of the tumor. To verify the association between immune staining and numerical variables, the non parametric Mann-Whitney U test was used, and the chi-square test was verified. The exact Fisher test was adopted when at least one of the expected frequencies in 2X2 tables was less than 5. The Kaplan-Meier method was used to estimate the probabilities of global survival, and the log-rank test was used to compare the survival curves. Results: there was statistically significant association between MMP 2 immune staining and regional metastasis. The variables associated with poor survival rates were N stage, histological grade, nerve invasion and immune staining for MMP 9. Conclusion: the grade of immune staining can be an indicative of node metastasis and poor survival rate, respectively