Spatially heterogenous dynamics in dense, driven granular flows

Interest in the dynamical arrest leading to a fluid --> solid transition in thermal and athermal systems has led to questions about the nature of these transitions. These jamming transitions may be dependent on the influence of extended structures on the dynamics of the system. Here we show results from a simple driven, dissipative, non-equilibrium system which exhibits dynamical heterogeneities similar to those observed in a supercooled liquid which is a system in thermal equilibrium. Observations of the time $\tau_R(r)$ required for a particular particle to move a distance $r$ reveal the existence of large-scale correlated dynamical regions with characteristic timescales chosen from a broad distribution. The mean squared displacement of ensembles of particles with varying characteristic $\tau_R(r)$ reveals an intriguing spatially heterogenous mobility. This suggests that a unified framework for jamming will have to be based on the connection between the nature of these heterogeneities and the effective dynamics.Comment: 6 pages, 5 figures, submitted to Europhys. Let

Stress and large-scale spatial structures in dense, driven granular flows

We study the appearance of large-scale dynamical heterogeneities in a simplified model of a driven, dissipative granular system. Simulations of steady-state gravity-driven flows of inelastically colliding hard disks show the formation of large-scale linear structures of particles with a high collision frequency. These chains can be shown to carry much of the collisional stress in the system due to a dynamical correlation that develops between the momentum transfer and time between collisions in these "frequently-colliding" particles. The lifetime of these dynamical stress heterogeneities is seen to grow as the flow velocity decreases towards jamming, leading to slowly decaying stress correlations reminiscent of the slow dynamics observed in supercooled liquids.Comment: 8 pages, 6 figure

Applying Human Rights-Based Approaches to Public Health: Lessons Learned from Maternal, Newborn and Child Health Programs

The application of human rights norms at the national policy level is largely codified, but rigorous research on the field-level application of a human rights based approach (HRBA) to health programs is still in its infancy. The paper identifies human rights norms from international law and standards that are relevant to maternal, newborn and child health (MNCH) programs, and presents an example of how a HRBA has been previously applied in an MNCH project. It introduces a HRBA framework recently developed by Concern Worldwide and partners, and conducts a document analysis of a previous Concern Worldwide project in Malawi. Discussion focuses on where and how the project could have benefited from incorporation of a HRBA in project design, implementation and evaluation. The authors conclude by discussing how such inclusion could have impacted project outcomes, and how such analysis can help inform future efforts to implement a HRBA to health

Secondary Structures in Long Compact Polymers

Compact polymers are self-avoiding random walks which visit every site on a lattice. This polymer model is used widely for studying statistical problems inspired by protein folding. One difficulty with using compact polymers to perform numerical calculations is generating a sufficiently large number of randomly sampled configurations. We present a Monte-Carlo algorithm which uniformly samples compact polymer configurations in an efficient manner allowing investigations of chains much longer than previously studied. Chain configurations generated by the algorithm are used to compute statistics of secondary structures in compact polymers. We determine the fraction of monomers participating in secondary structures, and show that it is self averaging in the long chain limit and strictly less than one. Comparison with results for lattice models of open polymer chains shows that compact chains are significantly more likely to form secondary structure.Comment: 14 pages, 14 figure

Diversity, differentiation, and linkage disequilibrium: prospects for association mapping in the malaria vector anopheles arabiensis

Association mapping is a widely applied method for elucidating the genetic basis of phenotypic traits. However, factors such as linkage disequilibrium and levels of genetic diversity influence the power and resolution of this approach. Moreover, the presence of population subdivision among samples can result in spurious associations if not accounted for. As such, it is useful to have a detailed understanding of these factors before conducting association mapping experiments. Here we conducted whole-genome sequencing on 24 specimens of the malaria mosquito vector, Anopheles arabiensis, to further understanding of patterns of genetic diversity, population subdivision and linkage disequilibrium in this species. We found high levels of genetic diversity within the An. arabiensis genome, with ~800,000 high-confidence, single- nucleotide polymorphisms detected. However, levels of nucleotide diversity varied significantly both within and between chromosomes. We observed lower diversity on the X chromosome, within some inversions, and near centromeres. Population structure was absent at the local scale (Kilombero Valley, Tanzania) but detected between distant populations (Cameroon vs. Tanzania) where differentiation was largely restricted to certain autosomal chromosomal inversions such as 2Rb. Overall, linkage disequilibrium within An. arabiensis decayed very rapidly (within 200 bp) across all chromosomes. However, elevated linkage disequilibrium was observed within some inversions, suggesting that recombination is reduced in those regions. The overall low levels of linkage disequilibrium suggests that association studies in this taxon will be very challenging for all but variants of large effect, and will require large sample sizes

Growing length scale in gravity-driven dense granular flow

We report simulations of a two-dimensional, dense, bidisperse system of inelastic hard disks falling down a vertical tube under the influence of gravity. We examine the approach to jamming as the average flow of particles down the tube is slowed by making the outlet narrower. Defining coarse-grained velocity and stress fields, we study two-point temporal and spatial correlation functions of these fields in a region of the tube where the time-averaged velocity is spatially uniform. We find that fluctuations in both velocity and stress become increasingly correlated as the system approaches jamming. We extract a growing length scale and time scale from these correlations.Comment: 21 pages, 13 figure

The Touch Thimble: Providing Fingertip Contact Feedback During Point-Force Haptic Interaction

Touching a real object with your fingertip provides simultaneous tactile and force feedback, yet most haptic interfaces for virtual environments can convey only one of these two essential modalities. To address this opportunity, we designed, prototyped, and evaluated the Touch Thimble, a new fingertip device that provides the user with the cutaneous sensation of making and breaking contact with virtual surfaces. Designed to attach to the endpoint of an impedance-type haptic interface like a SensAble Phantom, the Touch Thimble includes a slightly oversize cup that is suspended around the fingertip by passive springs. When the haptic interface applies contact forces from the virtual environment, the springs deflect to allow contact between the user\u27s fingertip and the inner surface of the cup. We evaluated a prototype Touch Thimble against a standard thimble in a formal user study and found that it did not improve nor degrade subjects\u27 ability to recognize smoothly curving surfaces. Although four of the eight subjects preferred it to the standard interface, overall the Touch Thimble made subjects slightly slower at recognizing the presented shapes. Detailed subject comments point out strengths and weaknesses of the current design and suggest avenues for future development of the device

Generation Z, Learning Preferences, and Technology: An Academic Technology Framework Based on Enterprise Architecture

This work provides an overview of Generation X, Y (Millennials), and Z and their characteristics in academia. We present the ways that mobile technology is infused into their lifestyle. We reference how Generation Y and Z in particular expect technology to be integrated into their educational experience, as well as how it helps faculty to facilitate both synchronous and asynchronous learning. Furthermore, an overview is provided of how technology currently contributes to learning and provides a framework for how educators can better engage current students. The conceptual academic technology framework (ATF) put forth in this work will provide an immediate impact in several key areas. This framework enhances structure during course design, which may be based directly on learning outcomes and department/school objectives. It will also directly improve consistency in faculty/student communication by closely monitoring how changes in communication methods have evolved. Finally, we describe how to integrate technology in a meaningful way, in a manner that does not distract students while preparing them for careers in business

Ground-truthing daily and lunar patterns of coral reef fish call rates on a US Virgin Island reef

© The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ferguson, S., Jensen, F., Hyer, M., Noble, A., Apprill, A., & Mooney, T. Ground-truthing daily and lunar patterns of coral reef fish call rates on a US Virgin Island reef. Aquatic Biology, 31, (2022): 77–87, https://doi.org/10.3354/ab00755.Coral reefs comprise some of the most biodiverse habitats on the planet. These ecosystems face a range of stressors, making quantifying community assemblages and potential changes vital to effective management. To understand short- and long-term changes in biodiversity and detect early warning signals of decline, new methods for quantifying biodiversity at scale are necessary. Acoustic monitoring techniques have proven useful in observing species activities and biodiversity on coral reefs through aggregate approaches (i.e. energy as a proxy). However, few studies have ground-truthed these acoustic analyses with human-based observations. In this study, we sought to expand these passive acoustic methods by investigating biological sounds and fish call rates on a healthy reef, providing a unique set of human-confirmed, labeled acoustic observations. We analyzed acoustic data from Tektite Reef, St. John, US Virgin Islands, over a 2 mo period. A subset of acoustic files was manually inspected to identify recurring biotic sounds and quantify reef activity throughout the day. We found a high variety of acoustic signals in this soundscape. General patterns of call rates across time conformed to expectations, with dusk and dawn showing important and significantly elevated peaks in soniferous fish activity. The data reflected high variability in call rates across days and lunar phases. Call rates did not correspond to sound pressure levels, suggesting that certain call types may drive crepuscular trends in sound levels while lower-level critical calls, likely key for estimating biodiversity and behavior, may be missed by gross sound level analyses.This research was funded by the National Science Foundation Biological Oceanography award 1536782. The experiments were conducted under National Park Service Scientific Research and Collecting Permits VIIS-2016-SCI-0017-20, and we thank the Park staff for their support

Mid-winter temperatures, not spring temperatures, predict breeding phenology in the European starling Sturnus vulgaris

In many species, empirical data suggest that temperatures less than 1 month before breeding strongly influence laying date, consistent with predictions that short lag times between cue and response are more reliable, decreasing the chance of mismatch with prey. Here we show in European starlings (Sturnus vulgaris) that mid-winter temperature ca 50–90 days before laying (8 January–22 February) strongly (r2 = 0.89) predicts annual variation in laying date. Mid-winter temperature also correlated highly with relative clutch size: birds laid later, but laid larger clutches, in years when mid-winter temperatures were lower. Despite a high degree of breeding synchrony (mean laying date 5–13 April = ±4 days; 80% of nests laid within 4.8 days within year), European starlings show strong date-dependent variation in clutch size and productivity, but this appears to be mediated by a different temporal mechanism for integration of supplemental cue (temperature) information. We suggest the relationship between mid-winter temperature and breeding phenology might be indirect with both components correlating with a third factor: temperature-dependent development of the starling\u27s insect (tipulid) prey. Mid-winter temperatures might set the trajectory of growth and final biomass of tipulid larvae, with this temperature cue providing starlings with information on breeding season prey availability (though exactly how remains unknown)