Quasi-potential landscape in complex multi-stable systems

Developmental dynamics of multicellular organism is a process that takes place in a multi-stable system in which each attractor state represents a cell type and attractor transitions correspond to cell differentiation paths. This new understanding has revived the idea of a quasi-potential landscape, first proposed by Waddington as a metaphor. To describe development one is interested in the "relative stabilities" of N attractors (N>2). Existing theories of state transition between local minima on some potential landscape deal with the exit in the transition between a pair attractor but do not offer the notion of a global potential function that relate more than two attractors to each other. Several ad hoc methods have been used in systems biology to compute a landscape in non-gradient systems, such as gene regulatory networks. Here we present an overview of the currently available methods, discuss their limitations and propose a new decomposition of vector fields that permit the computation of a quasi-potential function that is equivalent to the Freidlin-Wentzell potential but is not limited to two attractors. Several examples of decomposition are given and the significance of such a quasi-potential function is discussed.Comment: 30 pages, 6 figure

Microorganisms Associated with Volatile Organic Compound Production in Spoilt Mango Fruits

Microorganisms associated with the production of volatile compound in spoilt mango fruits sold in Sokoto town were isolated and identified. The organisms include seven species of bacteria and a species of yeast. These include Bacillus pumilus, Bacillus firmus, Brevibacillus laterosporus, Morganella morganii, Paenibacillus alvei, Staphylococcus saccharolyticus, Listeria monocytogenes and Candida krusei respectively. GC-MS analysis revealed the presence of eleven and sixteen volatile organic compound in the healthy and spoilt ripe mango fruits. Octadecanoic acid, oleic acid, 1 – Butanol, 3 – methyl-, carbonate (2:1) and 3,7 – Dimethyl nonane were common to both healthy and spoilt fruits with the first three having higher concentration in healthy fruits than spoilt while the later had higher concentration in the spoilt. One methyl group of 3,3- Dimethyl hexane in healthy fruit was shifted to position two to yield 2,3-Dimethyl hexane in the spoilt fruits. 2,2-Dimethylbutane, Methyl(methyl-4-deoxy-2,3-di-O-methyl.beta.1-threo-hex-4-enopyranosid) urinate, 3-(4-amino-phenyl)-2-(toluene-4-sulfonylamino)-propionic acid, 2-Methyl-3-heptanone, 3,5-Nonadien-7-yn-2-ol, (E,E), Butanoic acid, 1,1-dimethylethyl ester, 1-methyl-3-beta.phenylethyl-2,4,5-trioxoimidazolidine, Pentanoic acid, 2,2-dimethyl, ethyl ester (Vinyl 2,2-dimethylpentanoate), 4-Methyurazole, 1-Tridecyn- 4 – 9 – ol, 1-Hexyl-1-nitrocyclohexane were unique to spoilt fruits. This study suggests that these unique volatile metabolites could be exploited as biomarkers to discriminate pathogens even when more than one disease is present thereby curbing post harvest loss during storage after further validation and the volatile organic compound could form the basis for constructing a metabolomics database for Nigeria

Estimation of Human Health Risk Due to Heavy Metals around Schools and Auto-Mobile Workshops near Frequented Roads in Kaduna State, Nigeria

Heavy metals are widely known for their potential to cause carcinogenic and non-carcinogenic health risks. In this work, the carcinogenic and non-carcinogenic health risks associated with heavy metals in the vicinity of schools and auto mechanic workshops close to busy roads in Kaduna state was assessed using NEX CG EDXRF MODEL with brand name RIGAKU situated at a UTM Laboratory, Malaysia. The obtained heavy metals concentrations were used to estimate the health effects that might result from exposure to carcinogenic and non-carcinogenic chemicals for both the population ages using US EPA methodology. Findings indicated that in some locations the carcinogenic and non-carcinogenic hazards associated with exposure for residents was greater than the US EPA acceptable thresholds of 10-4 and 1 respectively. This indicated that the heavy metals may result to unacceptable carcinogenic and non-carcinogenic risks, which is an issue of concern in public health especially looking at the way school children play around these areas. The present study therefore provides scientific basis for strategies required to protect human and environmental health in schools and automobile workshops

Association of Chlamydia serology with HIV in Nigerian women

This research was carried out to detect the presence of Chlamydia in pregnant women and gynaecologic patients in the North-central geopolitical zone of Nigeria. Blood samples were collected and analysed by ELISA techniques. The blood samples were also screened for HIV infection. A sero-prevalence of 59.0% was recorded for the study area. The sero-prevalence was higher among the gynaecologic patients (62.0%) than the pregnant women (57.5%). The difference was statistically significant (P = 0.0001). Of the four centers chosen for the study, the Federal Capital Territory (Abuja) had the highest prevalence (84.7%), while Niger State had the least (28.7%). The difference was also statistically significant (P<0.0001). The prevalence rate of HIV among the participants in the study center was found to be 17.2%. Abuja had the highest prevalence rate of 24.6%, followed by Benue, 16.7%, then Kogi, 12.0% and finally, Niger, 4.7%. Chlamydia was found to be associated with HIV (p<0.0001). The sero-prevalence of chlamydia in the North-Central zone of Nigeria was found to be high. Chlamydia was found to be correlated with HIV in the study area and may have contributed to the zone emerging with the highest HIV prevalence in the country. For an infection that is largely asymptomatic but has devastating effects on populations, only a preventive approach would have beneficial effects in controlling the disease and its effects on women’s health in the country.Keywords: Chlamydia trachomatis, HIV, pregnant women, gynaecologic patients, co-infectio

Distributed information consensus filters for simultaneous input and state estimation

This paper describes the distributed information filtering where a set of sensor networks are required to simultaneously estimate input and state of a linear discrete-time system from collaborative manner. Our research purpose is to develop a consensus strategy in which sensor nodes communicate within the network through a sequence of Kalman iterations and data diffusion. A novel recursive information filtering is proposed by integrating input estimation error into measurement data and weighted information matrices. On the fusing process, local system state filtering transmits estimation information using the consensus averaging algorithm, which penalizes the disagreement in a dynamic manner. A simulation example is provided to compare the performance of the distributed information filtering with optimal Gillijins–De Moor’s algorithm

Karyomorphotypic variation in Eriospermum abyssinicum Baker

The karyomorphology of the cotton seed lily, Eriospermum abyssinicum Baker (family Eriospermaceae) was investigated through mitotic and meiotic studies. The chromosome complement was karyotypically analysed based on chromosome arm ratio and centromeric indices. The somatic chromosome complement of 2n = 24 recorded at metaphase I and the 12 bivalents at prophase I of meiosis suggested x = 6 basic chromosome number and paleopolyploidization process in the evolution of this species. There was no evidence of B chromosome or nucleolar-organizer in the complements. Variation in position of centromere ranged from the median to sub-median and sub-terminal. We found slight variation between some homologues in terms of lengths which suggest hybrid origin (allopolyploidy) of the genome. The microspore mother cell had normal meiosis with subsequent formation of 4 daughter nuclei and normal spores suggesting that the changes in chromosome behaviour occurred at very low frequency and these changes were transient with no evidence of phenotypic and genomic instability (aneuploidy) consequences. It was therefore inferred that the population of E. abyssinicum studied might have evolved through changes in chromosome structure or through natural hybridisation between closely related populations.Key words: Eriospermum abyssinicum, lily, chromosome, karyotype

Chromium(III) biosorption onto spent grains residual from brewing industry : equilibrium, kinetics and column studies

The use of industrial wastes for wastewater treatment as a strategy to their re-use and valorisation may provide important advances toward sustainability. The present work gives new insights into heavy metal biosorption onto low-cost biosorbents, studying chromium(III) biosorption onto spent grains residual from a Portuguese brewing industry both in batch and expanded bed column systems. Experimental studies involved unmodified spent grains and spent grains treated with NaOH. Metal uptake followed a rapid initial step, well described by the pseudo-second-order kinetic model up to 27 h, indicating chemisorption to be the rate-limiting step. Beyond this period intraparticle diffusion assumed an important role in the uptake global kinetics. The best fit for equilibrium data was obtained using the Langmuir model, with unmodified spent grains having the higher maximum uptake capacity (q max = 16.7 mg g1). In open system studies, using expanded bed columns, the best performance was also achieved with unmodified spent grains: Breakthrough time (C/C i = 0.25) and total saturation time (C/C i = 0.99) occurred after 58 and 199 h of operation, corresponding to the accumulation of 390 mg of chromium(III), 43.3 % of the total amount entering the column. These results suggest that alkali treatment does not improve spent grains uptake performance. Changes in biomass composition determined by Fourier transform infrared spectroscopy suggested hydroxyl groups and proteins to have an important role in chromium(III) biosorption. This study points out that unmodified spent grains can be successfully used as low-cost biosorbent for trivalent chromium.The authors would like to thank the Portuguese brewing industry UNICER for all the support and FCT (Fundacao para a Ciencia e a Tecnologia) financial support through the Grant PRAXIS XXI/BD/15945/98

Study of High Viscous Multiphase Flow Using OLGA Flow Simulator

The continuous depletion of conventional reserves of the world oil and gas has spurred investigation towards the exploration and production from unconventional sources of hydrocarbons such as heavy oil. However, heavy oils are known for their high liquid viscosities making them even more difficult and expensive to produce and transport in pipelines at ambient temperatures. As a consequence of this, a critical understanding of multiphase flow characteristics is vital to aid engineering design it has become imperative to investigate the rheology of high viscosity oils and ways of enhancing its production and transportation. In this study, the characteristics of high viscous oil flows were studied using OLGA flow simulator. A comparison between simulation results from the flow simulator and those of data acquired for high oil-gas viscosity experiments (i.e. for oil viscosity ranging from 0.7-5.0 Pa.s) for two phase flow parameters such liquid holdup and pressure gradient exhibited huge discrepancies and under prediction.    Keywords— High viscosity oil, Liquid holdup, OLGA, Pressure gradien

Analysis of the Impact of Relative Humidity and Mineral Nuclei Mode Aerosols Particle Concentration on the Visibility of Desert Aerosols

This paper presents the results of the Analysis of the Impact of relative humidity and water-soluble aerosol particle concentrations on the visibility and particle size distribution of desert aerosols based on microphysical properties of desert aerosols. The microphysical properties (the extinction coefficients, volume mix ratios, dry mode radii and wet mode radii) were extracted from Optical Properties of Aerosols and Clouds (OPAC 4.0) at eight relative humidities (00 to 99% RH) and at the spectral range of 0.4-0.8 mm. The concentrations of mineral nuclie component (MINN) were varied to obtain five different models. The angstrom exponent (a), the turbidity (b), the curvature (a2), humidification factor (g), the mean exponent of aerosol growth curve (µ) and the mean exponent of aerosol size distributions (n) were determined from the regression analysis of some standard equations. It was observed that the values of (a) are less than 1 throughout the 5 models which signifies the dominance of coarse mode particles over fine mode particles. It was observed that the curvature (a2) has both monomodal and bimodal types of distributions all through the 5 models and this signifies the dominance of coarse mode particles with some traces of fine mode particles. The visibility was observed to decrease with the increase in RH and increased with wavelength. The analysis further found that there is an inverse power law relationship between humidification factor, the mean exponent of the aerosol size distribution with the mean exponent of the aerosol growth curve (as the magnitude of (µ) decreases across the five models, the magnitudes of (g) and (n) increase, but the magnitude of both (g) and (n) increases for a given (µ) across the individual models). The mean exponent of aerosol size distribution (µ) being less than 3 indicate hazy condition of the desert atmosphere