Building capacity for clinical research in developing countries: the INDOX cancer research network experience

Transnational Organisations increasingly prioritise the need to support local research capacity in low and middle income countries in order that local priorities are addressed with due consideration of contextual issues. There remains limited evidence on the best way in which this should be done or the ways in which external agencies can support this process

Intra-session and inter-day reliability of the Myon 320 electromyography system during sub-maximal contractions

Electromyography systems are widely used within the field of scientific and clinical practices. The reliability of these systems are paramount when conducting research. The reliability of Myon 320 Surface Electromyography System is yet to be determined. This study aims to determine the intra-session and inter-day reliability of the Myon 320 Surface Electromyography System. Muscle activity from fifteen participants was measured at the anterior deltoid muscle during a bilateral front raise exercise, the vastus lateralis muscle during a squat exercise and the extensor carpi radialis brevis (ECRB) muscle during an isometric handgrip task. Intra-session and inter-day reliability was calculated by intraclass correlation coefficient, standard error of measurement and coefficient of variation (CV). The normalized root mean squared (RMS) surface electromyographic signals produced good intra-session and inter-day testing intraclass correlation coefficient values (range: 0.63-0.97) together with low standard error of measurement (range: 1.49-2.32) and CV (range: 95% Confidence Interval = 0.36-12.71) measures for the dynamic-and-isometric contractions. The findings indicate that the Myon 320 Surface Electromyography System produces good to fair reliability when examining intra-session and inter-day reliability. Findings of the study provide evidence of the reliability of electromyography between trials which is essential during clinical testing.</p

Categorizing how students use collaborative technologies in a globally distributed project.

Possibilities for collaboration in globally distributed projects have radically changed with the introduction of new Collaborative Technologies (CTs) in the Web 2.0 era. The use of such technologies in the context of students collaborating in a globally distributed project is little explored in research. A better understanding would provide opportunities for improving the collaboration, and more importantly is that a better understanding would improve the possibility of scaffolding, and student learning in general. In this paper we present results from a study of students' use of CTs in a globally distributed project with a focus on the challenges encountered in trying to collaborate using this technology. The study is focused on a few aspects of how a combination of CTs could be utilized and issues associated with their set up and adaption for use. We discuss potential reasons for the observed patterns of technology use and how they influenced the collaboration environment around a globally distributed student project

Invasive community-onset gram-positive infections from July 2018 through December 2022 at 2 children\u27s hospitals

BACKGROUND: Invasive infections caused by METHODS: Cases of iGAS, IPD, and I-CO-SA infections were identified prospectively and retrospectively at 2 large US children\u27s hospitals by positive cultures from July 2018 through December 2022. Admission data were used to estimate frequency. For comparison, rates of respiratory syncytial virus (RSV), influenza, and SARS-CoV-2 were estimated by the number of positive viral test results at each institution. RESULTS: I-CO-SA infections showed little variation in the study period. Rates of iGAS infection and IPD decreased by 46% and 44%, respectively, from 2019 to 2020, coinciding with a substantial decrease in RSV and influenza. In 2022, RSV and influenza infection rates increased to prepandemic winter season rates, coinciding with a return to prepandemic rates of IPD (225% increase from 2021 to 2022) and a surge above prepandemic rates of iGAS infections (543% increase from 2021 to 2022). CONCLUSIONS: The COVID-19 pandemic had an unexpected influence on IPD and iGAS infections that was temporally related to changes in rates of viral infections

Existence of a Meromorphic Extension of Spectral Zeta Functions on Fractals

We investigate the existence of the meromorphic extension of the spectral zeta function of the Laplacian on self-similar fractals using the classical results of Kigami and Lapidus (based on the renewal theory) and new results of Hambly and Kajino based on the heat kernel estimates and other probabilistic techniques. We also formulate conjectures which hold true in the examples that have been analyzed in the existing literature

Integrated Science Investigation of the Sun (ISIS): Design of the Energetic Particle Investigation

The Integrated Science Investigation of the Sun (ISIS) is a complete science investigation on the Solar Probe Plus (SPP) mission, which flies to within nine solar radii of the Sun's surface. ISIS comprises a two-instrument suite to measure energetic particles over a very broad energy range, as well as coordinated management, science operations, data processing, and scientific analysis. Together, ISIS observations allow us to explore the mechanisms of energetic particles dynamics, including their: (1) Origins-defining the seed populations and physical conditions necessary for energetic particle acceleration; (2) Acceleration-determining the roles of shocks, reconnection, waves, and turbulence in accelerating energetic particles; and (3) Transport-revealing how energetic particles propagate from the corona out into the heliosphere. The two ISIS Energetic Particle Instruments measure lower (EPI-Lo) and higher (EPI-Hi) energy particles. EPI-Lo measures ions and ion composition from approx. 20 keV/nucleon-15 MeV total energy and electrons from approx.25-1000 keV. EPI-Hi measures ions from approx. 1-200 MeV/nucleon and electrons from approx. 0.5-6 MeV. EPI-Lo comprises 80 tiny apertures with fields-of-view (FOVs) that sample over nearly a complete hemisphere, while EPI-Hi combines three telescopes that together provide five large-FOV apertures. ISIS observes continuously inside of 0.25 AU with a high data collection rate and burst data (EPI-Lo) coordinated with the rest of the SPP payload; outside of 0.25 AU, ISIS runs in low-rate science mode whenever feasible to capture as complete a record as possible of the solar energetic particle environment and provide calibration and continuity for measurements closer in to the Sun. The ISIS Science Operations Center plans and executes commanding, receives and analyzes all ISIS data, and coordinates science observations and analyses with the rest of the SPP science investigations. Together, ISIS' unique observations on SPP will enable the discovery, untangling, and understanding of the important physical processes that govern energetic particles in the innermost regions of our heliosphere, for the first time. This paper summarizes the ISIS investigation at the time of the SPP mission Preliminary Design Review in January 2014

Genomic Distribution and Inter-Sample Variation of Non-CpG Methylation across Human Cell Types

DNA methylation plays an important role in development and disease. The primary sites of DNA methylation in vertebrates are cytosines in the CpG dinucleotide context, which account for roughly three quarters of the total DNA methylation content in human and mouse cells. While the genomic distribution, inter-individual stability, and functional role of CpG methylation are reasonably well understood, little is known about DNA methylation targeting CpA, CpT, and CpC (non-CpG) dinucleotides. Here we report a comprehensive analysis of non-CpG methylation in 76 genome-scale DNA methylation maps across pluripotent and differentiated human cell types. We confirm non-CpG methylation to be predominantly present in pluripotent cell types and observe a decrease upon differentiation and near complete absence in various somatic cell types. Although no function has been assigned to it in pluripotency, our data highlight that non-CpG methylation patterns reappear upon iPS cell reprogramming. Intriguingly, the patterns are highly variable and show little conservation between different pluripotent cell lines. We find a strong correlation of non-CpG methylation and DNMT3 expression levels while showing statistical independence of non-CpG methylation from pluripotency associated gene expression. In line with these findings, we show that knockdown of DNMTA and DNMT3B in hESCs results in a global reduction of non-CpG methylation. Finally, non-CpG methylation appears to be spatially correlated with CpG methylation. In summary these results contribute further to our understanding of cytosine methylation patterns in human cells using a large representative sample set

Transverse Spin at PHENIX: Results and Prospects

The Relativistic Heavy Ion Collider (RHIC), as the world's first and only polarized proton collider, offers a unique environment in which to study the spin structure of the proton. In order to study the proton's transverse spin structure, the PHENIX experiment at RHIC took data with transversely polarized beams in 2001-02 and 2005, and it has plans for further running with transverse polarization in 2006 and beyond. Results from early running as well as prospective measurements for the future will be discussed.Comment: 6 pages, 2 figures, presented at Transversity 2005, Como, Ital

Constraints on the distribution of absorption in the X-ray selected AGN population found in the 13H XMM-Newton/Chandra deep field

We present an analysis of the X-ray properties of sources detected in the 13H XMM-Newton deep (200ks) field. In order to constrain the absorbed AGN population, we use extensive Monte Carlo simulations to directly compare the X-ray colours of observed sources with those predicted by several model distributions. We have tested the simplest form of the AGN unified scheme, whereby the intrinsic XLF of absorbed AGN is set to be the same as that of their unabsorbed brethren, coupled with various model distributions of absorption. The best fitting of these models sets the fraction of AGN with absorbing column NH, proportional to (logNH)^8. We have also tested two extensions to the unified scheme: an evolving absorption scenario, and a luminosity dependent model distribution. Both of these provide poorer matches to the observed X-ray colour distributions than the best fitting simple unified model. We find that a luminosity dependent density evolution XLF reproduces poorly the 0.5-2 keV source counts seen in the 13H field. Field to field variations could be the cause of this disparity. Computing the simulated X-ray colours with a simple absorbed power-law + reflection spectral model is found to over-predict, by a factor of two, the fraction of hard sources that are completely absorbed below 0.5 keV, implying that an additional source of soft-band flux must be present for a number of the absorbed sources. Finally, we show that around 40% of the 13H sample are expected to be AGN with NH>10^22 cm^-2.Comment: 13 pages, 9 figures, Accepted for publication in MNRA