81 research outputs found

    Exact analytical bit error rates for multiple access chaos-based communication systems

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    Author name used in this publication: Francis C. M. LauAuthor name used in this publication: Chi K. Tse2004-2005 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe

    A population study of binocular function.

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    As part of a genome-wide association study (GWAS) of perceptual traits in healthy adults, we measured stereo acuity, the duration of alternative percepts in binocular rivalry and the extent of dichoptic masking in 1060 participants. We present the distributions of the measures, the correlations between measures, and their relationships to other psychophysical traits. We report sex differences, and correlations with age, interpupillary distance, eye dominance, phorias, visual acuity and personality. The GWAS, using data from 988 participants, yielded one genetic association that passed a permutation test for significance: The variant rs1022907 in the gene VTI1A was associated with self-reported ability to see autostereograms. We list a number of other suggestive genetic associations (p<10(-5)).This work was supported by the Gatsby Charitable Foundation (GAT2903). J.B. was supported by a fellowship from Gonville and Caius College.This is the author accepted manuscript. The final version is available from Elsevier via http://dx.doi.org/10.1016/j.visres.2015.02.01

    Individual differences in human eye movements: An oculomotor signature?

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    Human eye movements are stereotyped and repeatable, but how specific to a normal individual are the quantitative properties of his or her eye movements? We recorded saccades, anti-saccades and smooth-pursuit eye movements in a sample of over 1000 healthy young adults. A randomly selected subsample (10%) of participants were re-tested on a second occasion after a median interval of 18.8 days, allowing us to estimate reliabilities. Each of several derived measures, including latencies, accuracies, velocities, and left-right asymmetries, proved to be very reliable. We give normative means and distributions for each measure and describe the pattern of correlations amongst them. We identify several measures that exhibit significant sex differences. The profile of our oculomotor measures for an individual constitutes a personal oculomotor signature that distinguishes that individual from most other members of the sample of 1000.This research was funded by the Gatsby Charitable Foundation (GAT2903). PTG was supported by the Cambridge Commonwealth and Overseas Trusts and the Overseas Research Students Awards Scheme, and JMB by a Research Fellowship at Gonville and Caius College, Cambridge

    An exploratory factor analysis of visual performance in a large population

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    A factor analysis was performed on 25 visual and auditory performance measures from 1060 participants. The results revealed evidence both for a factor relating to general perceptual performance, and for eight independent factors that relate to particular perceptual skills. In an unrotated PCA, the general factor for perceptual performance accounted for 19.9% of the total variance in the 25 performance measures. Following varimax rotation, 8 consistent factors were identified, which appear to relate to (1) sensitivity to medium and high spatial frequencies, (2) auditory perceptual ability (3) oculomotor speed, (4) oculomotor control, (5) contrast sensitivity at low spatial frequencies, (6) stereo acuity, (7) letter recognition, and (8) flicker sensitivity. The results of a hierarchical cluster analysis were consistent with our rotated factor solution. We also report correlations between the eight performance factors and other (non-performance) measures of perception, demographic and anatomical measures, and questionnaire items probing other psychological variables.This work was supported by the Gatsby Charitable Foundation (GAT2903). J.B. was supported by a fellowship from Gonville and Caius College

    Generalized Mittag-Leffler Distributions and Processes for Applications in Astrophysics and Time Series Modeling

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    Geometric generalized Mittag-Leffler distributions having the Laplace transform 11+βlog(1+tα),00\frac{1}{1+\beta\log(1+t^\alpha)},00 is introduced and its properties are discussed. Autoregressive processes with Mittag-Leffler and geometric generalized Mittag-Leffler marginal distributions are developed. Haubold and Mathai (2000) derived a closed form representation of the fractional kinetic equation and thermonuclear function in terms of Mittag-Leffler function. Saxena et al (2002, 2004a,b) extended the result and derived the solutions of a number of fractional kinetic equations in terms of generalized Mittag-Leffler functions. These results are useful in explaining various fundamental laws of physics. Here we develop first-order autoregressive time series models and the properties are explored. The results have applications in various areas like astrophysics, space sciences, meteorology, financial modeling and reliability modeling.Comment: 12 pages, LaTe

    Five mucosal transcripts of interest in ulcerative colitis identified by quantitative real-time PCR: a prospective study

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    <p>Abstract</p> <p>Background</p> <p>The cause and pathophysiology of ulcerative colitis are both mainly unknown. We have previously used whole-genome microarray technique on biopsies obtained from patients with ulcerative colitis to identifiy 5 changed mucosal transcripts. The aim of this study was to compare mucosal expressions of these five transcripts in ulcerative colitis patients vs. controls, along with the transcript expression in relation to the clinical ulcerative colitis status.</p> <p>Methods</p> <p>Colonic mucosal specimens from rectum and caecum were taken at ambulatory colonoscopy from ulcerative colitis patients (<it>n </it>= 49) with defined inflammatory activity and disease extension, and from controls (<it>n </it>= 67) without inflammatory bowel disease. The five mucosal transcripts aldolase B, elafin, MST-1, simNIPhom and SLC6A14 were analyzed using quantitative real-time PCR.</p> <p>Results</p> <p>Significant transcript differences in the rectal mucosa for all five transcripts were demonstrated in ulcerative colitis patients compared to controls. The grade of transcript expression was related to the clinical disease activity.</p> <p>Conclusion</p> <p>The five gene transcripts were changed in patients with ulcerative colitis, and were related to the disease activity. The known biological function of some of the transcripts may contribute to the inflammatory features and indicate a possible role of microbes in ulcerative colitis. The findings may also contribute to our pathophysiological understanding of ulcerative colitis.</p

    Inference of development activities from interaction with uninstrumented applications

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    Studying developers’ behavior in software development tasks is crucial for designing effective techniques and tools to support developers’ daily work. In modern software development, developers frequently use different applications including IDEs, Web Browsers, documentation software (such as Office Word, Excel, and PDF applications), and other tools to complete their tasks. This creates significant challenges in collecting and analyzing developers’ behavior data. Researchers usually instrument the software tools to log developers’ behavior for further studies. This is feasible for studies on development activities using specific software tools. However, instrumenting all software tools commonly used in real work settings is difficult and requires significant human effort. Furthermore, the collected behavior data consist of low-level and fine-grained event sequences, which must be abstracted into high-level development activities for further analysis. This abstraction is often performed manually or based on simple heuristics. In this paper, we propose an approach to address the above two challenges in collecting and analyzing developers’ behavior data. First, we use our ActivitySpace framework to improve the generalizability of the data collection. ActivitySpace uses operating-system level instrumentation to track developer interactions with a wide range of applications in real work settings. Secondly, we use a machine learning approach to reduce the human effort to abstract low-level behavior data. Specifically, considering the sequential nature of the interaction data, we propose a Condition Random Field (CRF) based approach to segment and label the developers’ low-level actions into a set of basic, yet meaningful development activities. To validate the generalizability of the proposed data collection approach, we deploy the ActivitySpace framework in an industry partner’s company and collect the real working data from ten professional developers’ one-week work in three actual software projects. The experiment with the collected data confirms that with initial human-labeled training data, the CRF model can be trained to infer development activities from low-level actions with reasonable accuracy within and across developers and software projects. This suggests that the machine learning approach is promising in reducing the human efforts required for behavior data analysis.This work was partially supported by NSFC Program (No. 61602403 and 61572426)

    A single molecule assay to probe monovalent and multivalent bonds between hyaluronan and its key leukocyte receptor CD44 under force

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    Glycosaminoglycans (GAGs), a category of linear, anionic polysaccharides, are ubiquitous in the extracellular space, and important extrinsic regulators of cell function. Despite the recognized significance of mechanical stimuli in cellular communication, however, only few single molecule methods are currently available to study how monovalent and multivalent GAG•protein bonds respond to directed mechanical forces. Here, we have devised such a method, by combining purpose-designed surfaces that afford immobilization of GAGs and receptors at controlled nanoscale organizations with single molecule force spectroscopy (SMFS). We apply the method to study the interaction of the GAG polymer hyaluronan (HA) with CD44, its receptor in vascular endothelium. Individual bonds between HA and CD44 are remarkably resistant to rupture under force in comparison to their low binding affinity. Multiple bonds along a single HA chain rupture sequentially and independently under load. We also demonstrate how strong non-covalent bonds, which are versatile for controlled protein and GAG immobilization, can be effectively used as molecular anchors in SMFS. We thus establish a versatile method for analyzing the nanomechanics of GAG•protein interactions at the level of single GAG chains, which provides new molecular-level insight into the role of mechanical forces in the assembly and function of GAG-rich extracellular matrices
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