1,766 research outputs found
Dynamics of myosin, microtubules, and Kinesin-6 at the cortex during cytokinesis in Drosophila S2 cells
© The Authors, 2009 . This article is distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License. The definitive version was published in Journal of Cell Biology 186 (2009): 727-738, doi:10.1083/jcb.200902083.Signals from the mitotic spindle during anaphase specify the location of the actomyosin contractile ring during cytokinesis, but the detailed mechanism remains unresolved. Here, we have imaged the dynamics of green fluorescent proteinâtagged myosin filaments, microtubules, and Kinesin-6 (which carries activators of Rho guanosine triphosphatase) at the cell cortex using total internal reflection fluorescence microscopy in flattened Drosophila S2 cells. At anaphase onset, Kinesin-6 relocalizes to microtubule plus ends that grow toward the cortex, but refines its localization over time so that it concentrates on a subset of stable microtubules and along a diffuse cortical band at the equator. The pattern of Kinesin-6 localization closely resembles where new myosin filaments appear at the cortex by de novo assembly. While accumulating at the equator, myosin filaments disappear from the poles of the cell, a process that also requires Kinesin-6 as well as possibly other signals that emanate from the elongating spindle. These results suggest models for how Kinesin-6 might define the position of cortical myosin during cytokinesis.This work was supported by a National Institutes of Health grant NIH
38499 to R.D. Vale
Saving Face: Inclusive Communication With College Students With Disabilities Using Politeness And Face Negotiation
Have I offended anyone today? Have I been insensitive? Creating welcoming inclusive environments for students with and without disabilities is a higher education imperative. The academy strives to create diverse and welcoming atmospheres for students and educators and employ social justice and face saving measures to encourage respectful communication and discourage discriminatory behaviors. With the increase of college students with disabilities, professionals need to be comfortable and confident in their communication tactics. Applying politeness and face-negotiation theories to the communication preferences and behaviors of college students with disabilities, this article offers practice-oriented applications for respectful inclusive communication
Effects of superâshear rupture speed on the high frequency content of Sâwaves investigated using spontaneous dynamic rupture models and isochrone theory
This paper achieves three goals: 1) It demonstrates that crack tips governed by friction laws including slipâweakening, rateâand stateâdependent laws, and thermal pressurization of pore fluids, propagating at superâshear speed have slip velocity functions with reduced high frequency content compared to crack tips traveling at subâshear speeds. This is demonstrated
using a fully dynamic, spontaneous, 3âD earthquake model, in which we calculate fault slip velocity at nine points (locations) distributed along a quarterâcircle on the fault where the rupture is traveling at superâshear speed in the inâplane direction and subâshear speed in the
antiâplane direction. This holds for a fault governed by the linear slipâweakening constitutive equation, by slipâweakening with thermal pressurization of pore fluid and by rateâ and stateâdependent laws with thermal pressurization. The same is also true even assuming a highly heterogeneous initial shear stress field on the fault. 2) Using isochrone theory we derive a general expressions for the spectral characteristics and geometric spreading of two pulses
arising from superâshear rupture, the wellâknown Mach wave, and a second lesser known
pulse caused by rupture acceleration. 3) The paper demonstrates that the Mach cone
amplification of high frequencies overwhelms the deamplification of high frequency content in the slip velocity functions in superâshear ruptures. Consequently, when earthquake ruptures travel at superâshear speed, a net enhancement of high frequency radiation is expected, and the alleged âlowâ peak accelerations observed for the 2002 Denali and other large earthquakes are
probably not caused by diminished high frequency content in the slip velocity function, as has been speculated
A global search inversion for earthquake kinematic rupture history: Application to the 2000 western Tottori, Japan earthquake
We present a two-stage nonlinear technique to invert strong motions records and
geodetic data to retrieve the rupture history of an earthquake on a finite fault. To account
for the actual rupture complexity, the fault parameters are spatially variable peak slip
velocity, slip direction, rupture time and risetime. The unknown parameters are given at
the nodes of the subfaults, whereas the parameters within a subfault are allowed to
vary through a bilinear interpolation of the nodal values. The forward modeling is
performed with a discrete wave number technique, whose Greenâs functions include the
complete response of the vertically varying Earth structure. During the first stage, an
algorithm based on the heat-bath simulated annealing generates an ensemble of models
that efficiently sample the good data-fitting regions of parameter space. In the second
stage (appraisal), the algorithm performs a statistical analysis of the model ensemble and
computes a weighted mean model and its standard deviation. This technique, rather than
simply looking at the best model, extracts the most stable features of the earthquake
rupture that are consistent with the data and gives an estimate of the variability of each
model parameter. We present some synthetic tests to show the effectiveness of the method
and its robustness to uncertainty of the adopted crustal model. Finally, we apply this
inverse technique to the well recorded 2000 western Tottori, Japan, earthquake (Mw 6.6);
we confirm that the rupture process is characterized by large slip (3-4 m) at very shallow
depths but, differently from previous studies, we imaged a new slip patch (2-2.5 m)
located deeper, between 14 and 18 km depth
Crystal structure of the Anabaena sensory rhodopsin transducer.
We present crystal structures of the Anabaena sensory rhodopsin transducer (ASRT), a soluble cytoplasmic protein that interacts with the first structurally characterized eubacterial retinylidene photoreceptor Anabaena sensory rhodopsin (ASR). Four crystal structures of ASRT from three different spacegroups were obtained, in all of which ASRT is present as a planar (C4) tetramer, consistent with our characterization of ASRT as a tetramer in solution. The ASRT tetramer is tightly packed, with large interfaces where the well-structured beta-sandwich portion of the monomers provides the bulk of the tetramer-forming interactions, and forms a flat, stable surface on one side of the tetramer (the beta-face). Only one of our four different ASRT crystals reveals a C-terminal alpha-helix in the otherwise all-beta protein, together with a large loop from each monomer on the opposite face of the tetramer (the alpha-face), which is flexible and largely disordered in the other three crystal forms. Gel-filtration chromatography demonstrated that ASRT forms stable tetramers in solution and isothermal microcalorimetry showed that the ASRT tetramer binds to ASR with a stoichiometry of one ASRT tetramer per one ASR photoreceptor with a K(d) of 8 microM in the highest affinity measurements. Possible mechanisms for the interaction of this transducer tetramer with the ASR photoreceptor via its flexible alpha-face to mediate transduction of the light signal are discussed
Single molecule biochemistry using optical tweezers
AbstractThe use of optical trapping to create extremely compliant mechanical probes has ushered in a new field of biological inquiry, the mechanical and kinetic study of proteins at the single molecule level. This review focuses on three examples of such study and includes methods of extracting parameters of interest from the raw data such experiments generate
Potassium-Selective Channelrhodopsins
Since their discovery 21 years ago, channelrhodopsins have come of age and have become indispensable tools for optogenetic control of excitable cells such as neurons and myocytes. Potential therapeutic utility of channelrhodopsins has been proven by partial vision restoration in a human patient. Previously known channelrhodopsins are either proton channels, non-selective cation channels almost equally permeable to Na+ and K+ besides protons, or anion channels. Two years ago, we discovered a group of channelrhodopsins that exhibit over an order of magnitude higher selectivity for K+ than for Na+. These proteins, known as âkalium channelrhodopsinsâ or KCRs, lack the canonical tetrameric selectivity filter found in voltage- and ligand-gated K+ channels, and use a unique selectivity mechanism intrinsic to their individual protomers. Mutant analysis has revealed that the key residues responsible for K+ selectivity in KCRs are located at both ends of the putative cation conduction pathway, and their role has been confirmed by high-resolution KCR structures. Expression of KCRs in mouse neurons and human cardiomyocytes enabled optical inhibition of these cellsâ electrical activity. In this minireview we briefly discuss major results of KCR research obtained during the last two years and suggest some directions of future research
One must reconstitute the functions of interest from purified proteins
I am often asked by students and younger colleagues and now by the editors of this issue to tell the history of the development of the in vitro motility assay and the dual-beam single-molecule laser trap assay for myosin-driven actin filament movement, used widely as key assays for understanding how both muscle and nonmuscle myosin molecular motors work. As for all discoveries, the history of the development of the myosin assays involves many people who are not authors of the final publications, but without whom the assays would not have been developed as they are. Also, early experiences shape how one develops ideas and experiments, and influence future discoveries in major ways. I am pleased here to trace my own path and acknowledge the many individuals involved and my early science experiences that led to the work I and my students, postdoctoral fellows, and sabbatical visitors did to develop these assays. Mentors are too often overlooked in historical descriptions of discoveries, and my story starts with those who mentored me
Nonlinear Relaxation Dynamics in Elastic Networks and Design Principles of Molecular Machines
Analyzing nonlinear conformational relaxation dynamics in elastic networks
corresponding to two classical motor proteins, we find that they respond by
well-defined internal mechanical motions to various initial deformations and
that these motions are robust against external perturbations. We show that this
behavior is not characteristic for random elastic networks. However, special
network architectures with such properties can be designed by evolutionary
optimization methods. Using them, an example of an artificial elastic network,
operating as a cyclic machine powered by ligand binding, is constructed.Comment: 12 pages, 9 figure
Internal Motility in Stiffening Actin-Myosin Networks
We present a study on filamentous actin solutions containing heavy meromyosin
subfragments of myosin II motor molecules. We focus on the viscoelastic phase
behavior and internal dynamics of such networks during ATP depletion. Upon
simultaneously using micro-rheology and fluorescence microscopy as
complementary experimental tools, we find a sol-gel transition accompanied by a
sudden onset of directed filament motion. We interpret the sol-gel transition
in terms of myosin II enzymology, and suggest a "zipping" mechanism to explain
the filament motion in the vicinity of the sol-gel transition.Comment: 4 pages, 3 figure
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