Eukaryotic Microbes, Principally Fungi and Labyrinthulomycetes, Dominate Biomass on Bathypelagic Marine Snow

In the bathypelagic realm of the ocean, the role of marine snow as a carbon and energy source for the deep-sea biota and as a potential hotspot of microbial diversity and activity has not received adequate attention. Here, we collected bathypelagic marine snow by gentle gravity filtration of sea water onto μm filters from similar to 1000 to 3900 m to investigate the relative distribution of eukaryotic microbes. Compared with sediment traps that select for fast-sinking particles, this method collects particles unbiased by settling velocity. While prokaryotes numerically exceeded eukaryotes on marine snow, eukaryotic microbes belonging to two very distant branches of the eukaryote tree, the fungi and the labyrinthulomycetes, dominated overall biomass. Being tolerant to cold temperature and high hydrostatic pressure, these saprotrophic organisms have the potential to significantly contribute to the degradation of organic matter in the deep sea. Our results demonstrate that the community composition on bathypelagic marine snow differs greatly from that in the ambient water leading to wide ecological niche separation between the two environments

Estimating Carbon Flux From Optically Recording Total Particle Volume at Depths Below the Primary Pycnocline

Optical instruments can rapidly determine numbers and characteristics of water column particles with high sensitivity. Here we show the usefulness of optically assessed total particle volume below the main pycnocline to estimate carbon export in two systems: the open subarctic North Atlantic and the Ross Sea, Antarctica. Both regions exhibit seasonally high phytoplankton production and efficient export (i.e., a strong biological pump). Total particle volumes in the mesopelagic (200-300 m) were significantly correlated with those in the overlying surface mixed layer (50-60 m), indicating that most particles at depth reflect export from the surface. This connectivity, however, is modulated by the physical structure of the water column and by particle type (e.g., the presence of colonies of the haptophyte Phaeocystis antarctica versus diatoms). Evidence from both regions show that a strong pycnocline can delay or may even prevent particles from settling to deeper layers, which then succumb to disintegration, and microbial and zooplankton consumption. Strong katabatic winds in the Ross Sea may deepen the mixed layer, causing a rapid transfer of particles to mesopelagic depths through the mixed-layer pump. Independent estimates of seasonally integrated export production in the Ross Sea, based on upper water column carbon mass balance, were significantly correlated (in the order of shared variance) with (1) total particle volumes from images, (2) particulate organic carbon, and (3) chlorophyll fluorescence, all recorded at a depth range of 200-300 m. Carbon export was not significantly correlated with particle abundance measured by a Coulter counter at the same depth range. Measuring total particle volume below the primary pycnocline is therefore a useful approach to estimate carbon export at least in regions characterized by seasonally high particle export

Fracture zones in the Mid Atlantic Ridge lead to alterations in prokaryotic and viral parameters in deep-water masses

We hypothesized that mixing zones of deep-water masses act as ecotones leading to alterations in microbial diversity and activity due to changes in the biogeochemical characteristics of these boundary systems. We determined the changes in prokaryotic and viral abundance and production in the Vema Fracture Zone (VFZ) of the subtropical North Atlantic Ocean, where North Atlantic Deep Water (NADW) and Antarctic Bottom Water (AABW) are funneled through this narrow canyon and therefore, are subjected to intense vertical mixing. Consequently, salinity, potential temperature, oxygen, PO4, SiO4, NO3 were altered in the NADW inside the VFZ as compared to the NADW outside of the VFZ. Also, viral abundance, lytic viral production (VP) and the virus-to-prokaryote ratio (VPR) were elevated in the NADW in the VFZ as compared to the NADW outside the VFZ. In contrast to lytic VP, lysogenic VP and both the frequency of lytically (FIC) and lysogenically infected cells (FLC) did not significantly differ between in- and outside the VFZ. Generally, FIC was higher than FLC throughout the water column. Prokaryotic (determined by T-RFLP) and viral (determined by RAPD-PCR) community composition was depth-stratified inside and outside the VFZ. The viral community was more modified both with depth and over distance inside the VFZ as compared to the northern section and to the prokaryotic communities. However, no clusters of prokaryotic and viral communities characteristic for the VFZ were identified. Based on our observations, we conclude that turbulent mixing of the deep water masses impacts not only the physico-chemical parameters of the mixing zone but also the interaction between viruses and prokaryotes due to a stimulation of the overall activity. However, only minor effects of deep water mixing were observed on the community composition of the dominant prokaryotes and viruses

Thermonuclear Reaction Rate of 23Mg(p,gamma)24$Al

Updated stellar rates for the reaction 23Mg(p,gamma)24Al are calculated by using all available experimental information on 24Al excitation energies. Proton and gamma-ray partial widths for astrophysically important resonances are derived from shell model calculations. Correspondences of experimentally observed 24Al levels with shell model states are based on application of the isobaric multiplet mass equation. Our new rates suggest that the 23Mg(p,gamma)24Al reaction influences the nucleosynthesis in the mass A>20 region during thermonuclear runaways on massive white dwarfs.Comment: 13 pages (uses Revtex) including 3 postscript figures (uses epsfig.sty), accepted for publication in Phys. Rev.

Corrigendum: Resolving the abundance and air-sea fluxes of airborne microorganisms in the North Atlantic Ocean

We found an implementation error in the calculation of the deposition velocity (vd) which, in turn, affected all the estimated vd-depending parameters (deposition flux, residence time, and traveled distance by microorganisms). Deposition fluxes are now somewhat lower than previously estimated, resulting in residence times and traveled distances longer than those previously estimated. In addition, the spray fluxes were calculated using a spray generation function (dF/dr0) valid for droplets of radii between 0.5 and 12 μm proposed by Blanchard (1963) and Gathman (1982) as corrected by Andreas et al. (1995). However, in the calculation of dF/dr0, we exceeded this valid range of radii given that we included droplets with radii from 0.2 μm according to the small size of some microbial cells. Thus, a different formulation of dF/dr0, developed by Gong (2003), is now used for the estimation of spray fluxes of microbes, which is valid even for small droplets from a radius of 0.07 μm. Below, we offer a new corrected version of the paragraphs affected by corrections along the text. In addition, we show corrected versions of Figure 1 (forward trajectories according residence times), Figure 3 (deposition velocity values), Figure 5 (spray and deposition fluxes), Figure 6 (Net fluxes), and Table 1. The authors apologize for the errors in the estimates reported in the original manuscript. These corrections only affect the magnitude of some of the reported variables and even though they do not change the scientific conclusions of the article they are reported here for accuracy and reproducibility.En prens

Nuclear uncertainties in the NeNa-MgAl cycles and production of 22Na and 26Al during nova outbursts

Classical novae eject significant amounts of nuclear processed material into the interstellar medium. Among the isotopes synthesized during such explosions, two radioactive nuclei deserve a particular attention: 22Na and 26Al. In this paper, we investigate the nuclear paths leading to 22Na and 26Al production during nova outbursts by means of an implicit, hydrodynamic code that follows the course of the thermonuclear runaway from the onset of accretion up to the ejection stage. New evolutionary sequences of ONe novae have been computed, using updated nuclear reaction rates relevant to 22Na and 26Al production. Special attention is focused on the role played by nuclear uncertainties within the NeNa and MgAl cycles in the synthesis of such radioactive species. From the series of hydrodynamic models, which assume upper, recommended or lower estimates of the reaction rates, we derive limits on the production of both 22Na and 26Al. We outline a list of nuclear reactions which deserve new experimental investigations in order to reduce the wide dispersion introduced by nuclear uncertainties in the 22Na and 26Al yields.Comment: 46 pages, 4 figures. Accepted for publication in The Astrophysical Journa

Seasonal dynamics of marine snow‐associated and free‐living demethylating bacterial communities in the coastal northern Adriatic Sea

The extent of DMSP demethylation has been hypothesized to depend on DMSP availability and bacterial sulfur demand, which might lead to niche differentiation of the demethylating bacterial community. In this study, we determined DMSP concentrations in marine snow and the ambient water over a seasonal cycle and linked DMSP concentrations to the abundance of bacteria harboring the demethylation dmdA gene in the Adriatic Sea. In marine snow, DMSP concentrations were up to four times higher than in the ambient water and three times higher in marine snow in summer than in winter. The average dmdA:recA gene ratio over the sampling period was 0.40 ± 0.24 in marine snow and 0.48 ± 0.21 in the ambient water. However, at the subclade level, differences in the demethylating bacterial community of marine snow and the ambient water were apparent. Seasonal patterns of potentially demethylating bacteria were best visible at the oligotype level. In the ambient water, the SAR116 and the OM60/NOR5 clade were composed of oligotypes that correlated to high DMSP concentrations, while oligotypes of the Rhodospirillales correlated to low DMSP concentrations. Our results revealed a pronounced seasonal variability and spatial heterogeneity in DMSP concentrations and the associated demethylating bacterial community

Reaction rates for Neutron Capture Reactions to C-, N- and O-isotopes to the neutron rich side of stability

The reaction rates of neutron capture reactions on light nuclei are important for reliably simulating nucleosynthesis in a variety of stellar scenarios. Neutron capture reaction rates on neutron-rich C-, N-, and O-isotopes are calculated in the framework of a hybrid compound and direct capture model. The results are tabulated and compared with the results of previous calculations as well as with experimental results.Comment: 33 pages (uses revtex) and 9 postscript figures, accepted for publication in Phys. Rev.

Reviews and syntheses: Heterotrophic fixation of inorganic carbon – significant but invisible flux in environmental carbon cycling

Heterotrophic CO2 fixation is a significant yet underappreciated CO2 flux in environmental carbon cycling. In contrast to photosynthesis and chemolithoautotrophy – the main recognized autotrophic CO2 fixation pathways – the importance of heterotrophic CO2 fixation remains enigmatic. All heterotrophs – from microorganisms to humans – take up CO2 and incorporate it into their biomass. Depending on the availability and quality of growth substrates, and drivers such as the CO2 partial pressure, heterotrophic CO2 fixation contributes at least 1 %–5 % and in the case of methanotrophs up to 50 % of the carbon biomass. Assuming a standing stock of global heterotrophic biomass of 47–85 Pg C, we roughly estimate that up to 5 Pg C might be derived from heterotrophic CO2 fixation, and up to 12 Pg C yr−1 originating from heterotrophic CO2 fixation is funneled into the global annual heterotrophic production of 34–245 Pg C yr−1. These first estimates on the importance of heterotrophic fixation of inorganic carbon indicate that this pathway should be incorporated in present and future carbon cycling budgets.</p

Measurement of neutron capture on 48^{48}Ca at thermal and thermonuclear energies

At the Karlsruhe pulsed 3.75\,MV Van de Graaff accelerator the thermonuclear $^{48}$Ca(n,$\gamma$)$^{49}$Ca(8.72\,min) cross section was measured by the fast cyclic activation technique via the 3084.5\,keV $\gamma$-ray line of the $^{49}$Ca-decay. Samples of CaCO$_3$ enriched in $^{48}$Ca by 77.87\,\% were irradiated between two gold foils which served as capture standards. The capture cross-section was measured at the neutron energies 25, 151, 176, and 218\,keV, respectively. Additionally, the thermal capture cross-section was measured at the reactor BR1 in Mol, Belgium, via the prompt and decay $\gamma$-ray lines using the same target material. The $^{48}$Ca(n,$\gamma$)$^{49}$Ca cross-section in the thermonuclear and thermal energy range has been calculated using the direct-capture model combined with folding potentials. The potential strengths are adjusted to the scattering length and the binding energies of the final states in $^{49}$Ca. The small coherent elastic cross section of $^{48}$Ca+n is explained through the nuclear Ramsauer effect. Spectroscopic factors of $^{49}$Ca have been extracted from the thermal capture cross-section with better accuracy than from a recent (d,p) experiment. Within the uncertainties both results are in agreement. The non-resonant thermal and thermonuclear experimental data for this reaction can be reproduced using the direct-capture model. A possible interference with a resonant contribution is discussed. The neutron spectroscopic factors of $^{49}$Ca determined from shell-model calculations are compared with the values extracted from the experimental cross sections for $^{48}$Ca(d,p)$^{49}$Ca and $^{48}$Ca(n,$\gamma$)$^{49}$Ca.Comment: 15 pages (uses Revtex), 7 postscript figures (uses psfig), accepted for publication in PRC, uuencoded tex-files and postscript-files also available at ftp://is1.kph.tuwien.ac.at/pub/ohu/Ca.u