Molecular characterization of beta-tubulin from Phakopsora pachyrhizi, the causal agent of Asian soybean rust

β-tubulins are structural components of microtubules and the targets of benzimidazole fungicides used to control many diseases of agricultural importance. Intron polymorphisms in the intron-rich genes of these proteins have been used in phylogeographic investigations of phytopathogenic fungi. In this work, we sequenced 2764 nucleotides of the β-tubulin gene (Pp tubB) in samples of Phakopsora pachyrhizi collected from seven soybean fields in Brazil. Pp tubB contained an open reading frame of 1341 nucleotides, including nine exons and eight introns. Exon length varied from 14 to 880 nucleotides, whereas intron length varied from 76 to 102 nucleotides. The presence of only four polymorphic sites limited the usefulness of Pp tubB for phylogeographic studies in P. pachyrhizi. The gene structures of Pp tubB and orthologous β-tubulin genes of Melampsora lini and Uromyces viciae-fabae were highly conserved. The amino acid substitutions in β-tubulin proteins associated with the onset of benzimidazole resistance in model organisms, especially at His 6 , Glu 198 and Phe 200 , were absent from the predicted sequence of the P. pachyrhizi β-tubulin protein

Molecular characterization of beta-tubulin from Phakopsora pachyrhizi, the causal agent of Asian soybean rust

β-tubulins are structural components of microtubules and the targets of benzimidazole fungicides used to control many diseases of agricultural importance. Intron polymorphisms in the intron-rich genes of these proteins have been used in phylogeographic investigations of phytopathogenic fungi. In this work, we sequenced 2764 nucleotides of the β-tubulin gene (Pp tubB) in samples of Phakopsora pachyrhizi collected from seven soybean fields in Brazil. Pp tubB contained an open reading frame of 1341 nucleotides, including nine exons and eight introns. Exon length varied from 14 to 880 nucleotides, whereas intron length varied from 76 to 102 nucleotides. The presence of only four polymorphic sites limited the usefulness of Pp tubB for phylogeographic studies in P. pachyrhizi. The gene structures of Pp tubB and orthologous β-tubulin genes of Melampsora lini and Uromyces viciae-fabae were highly conserved. The amino acid substitutions in β-tubulin proteins associated with the onset of benzimidazole resistance in model organisms, especially at His6, Glu198 and Phe200, were absent from the predicted sequence of the P. pachyrhizi β-tubulin protein

A piscicultura e o ambiente: o uso de alimentos ambientalmente corretos em piscicultura Fish farming and the environment: the use of environmental friendly feeds in fish culture

Embora a ciência da nutrição de peixes esteja longe de estabelecer um padrão geral de exigências nutricionais, a necessidade de desenvolvimento de alimentos de baixo impacto poluente há muito faz parte da agenda das comunidades científica e empresarial internacional da aqüicultura. Não só é absolutamente possível formular alimentos ambientalmente corretos, como é necessário modelar a formulação destes alimentos. Porém, é necessária absoluta acurácia para atender formulações espécie-específicas, considerando-se as interações da biologia e fisiologia nutricional das espécies com os alimentos e com as variações abióticas do meio. O conhecimento disponível sobre as mais de 200 espécies de peixe produzidas comercialmente no mundo é ainda incipiente e os sistemas de produção de peixe, nos diferentes regimes de exploração, estão implantados em todas as condições ecológicas possíveis. Neste cenário, produzir rações ambientalmente corretas é, senão impossível, pelo menos muito difícil e depende da ação coordenada e positiva de produtores, indústria da alimentação, agências regulatórias, e instituições de ensino e pesquisa para definir os parâmetros necessários à consecução deste objetivo.<br>Although fish nutrition science is far from establishing general standards of nutritional requirements, the need for developing low impact feeds has long been included in the agenda of aquaculture's international scientific and business communities of. Not only is absolutely possible to formulate environmental friendly feeds, as it is necessary modeling the formulation of these feeds. However, it is necessary higher accuracy to develop species-specific formulations, considering interactions of the biology and nutritional physiology of the species with the feedstuffs and variations of abiotic environment. The knowledge on more than 200 species of commercially farmed fish is still incipient and fish production systems, in their most varied farming conditions, are set up in every possible ecological conditions. In this scenario, producing environmental friendly feeds is if not impossible, at least very, very difficult, depending on coordinated and positive action of producers, industry, regulatory agencies, and institutions of higher education and research to define the parameters needed to achieve this goal