Some resonances between Eastern thought and Integral Biomathics in the framework of the WLIMES formalism for modelling living systems

Forty-two years ago, Capra published “The Tao of Physics” (Capra, 1975). In this book (page 17) he writes: “The exploration of the atomic and subatomic world in the twentieth century has …. necessitated a radical revision of many of our basic concepts” and that, unlike ‘classical’ physics, the sub-atomic and quantum “modern physics” shows resonances with Eastern thoughts and “leads us to a view of the world which is very similar to the views held by mystics of all ages and traditions.“ This article stresses an analogous situation in biology with respect to a new theoretical approach for studying living systems, Integral Biomathics (IB), which also exhibits some resonances with Eastern thought. Stepping on earlier research in cybernetics1 and theoretical biology,2 IB has been developed since 2011 by over 100 scientists from a number of disciplines who have been exploring a substantial set of theoretical frameworks. From that effort, the need for a robust core model utilizing advanced mathematics and computation adequate for understanding the behavior of organisms as dynamic wholes was identified. At this end, the authors of this article have proposed WLIMES (Ehresmann and Simeonov, 2012), a formal theory for modeling living systems integrating both the Memory Evolutive Systems (Ehresmann and Vanbremeersch, 2007) and the Wandering Logic Intelligence (Simeonov, 2002b). Its principles will be recalled here with respect to their resonances to Eastern thought

Hierarchical Multi-resolution Mesh Networks for Brain Decoding

We propose a new framework, called Hierarchical Multi-resolution Mesh Networks (HMMNs), which establishes a set of brain networks at multiple time resolutions of fMRI signal to represent the underlying cognitive process. The suggested framework, first, decomposes the fMRI signal into various frequency subbands using wavelet transforms. Then, a brain network, called mesh network, is formed at each subband by ensembling a set of local meshes. The locality around each anatomic region is defined with respect to a neighborhood system based on functional connectivity. The arc weights of a mesh are estimated by ridge regression formed among the average region time series. In the final step, the adjacency matrices of mesh networks obtained at different subbands are ensembled for brain decoding under a hierarchical learning architecture, called, fuzzy stacked generalization (FSG). Our results on Human Connectome Project task-fMRI dataset reflect that the suggested HMMN model can successfully discriminate tasks by extracting complementary information obtained from mesh arc weights of multiple subbands. We study the topological properties of the mesh networks at different resolutions using the network measures, namely, node degree, node strength, betweenness centrality and global efficiency; and investigate the connectivity of anatomic regions, during a cognitive task. We observe significant variations among the network topologies obtained for different subbands. We, also, analyze the diversity properties of classifier ensemble, trained by the mesh networks in multiple subbands and observe that the classifiers in the ensemble collaborate with each other to fuse the complementary information freed at each subband. We conclude that the fMRI data, recorded during a cognitive task, embed diverse information across the anatomic regions at each resolution.Comment: 18 page

Consciosusness in Cognitive Architectures. A Principled Analysis of RCS, Soar and ACT-R

This report analyses the aplicability of the principles of consciousness developed in the ASys project to three of the most relevant cognitive architectures. This is done in relation to their aplicability to build integrated control systems and studying their support for general mechanisms of real-time consciousness.\ud To analyse these architectures the ASys Framework is employed. This is a conceptual framework based on an extension for cognitive autonomous systems of the General Systems Theory (GST).\ud A general qualitative evaluation criteria for cognitive architectures is established based upon: a) requirements for a cognitive architecture, b) the theoretical framework based on the GST and c) core design principles for integrated cognitive conscious control systems

Super Fuzzy Matrices and Super Fuzzy Models for Social Scientists

This book introduces the concept of fuzzy super matrices and operations on them. This book will be highly useful to social scientists who wish to work with multi-expert models. Super fuzzy models using Fuzzy Cognitive Maps, Fuzzy Relational Maps, Bidirectional Associative Memories and Fuzzy Associative Memories are defined here. The authors introduce 13 multi-expert models using the notion of fuzzy supermatrices. These models are described with illustrative examples. This book has three chapters. In the first chaper, the basic concepts about super matrices and fuzzy super matrices are recalled. Chapter two introduces the notion of fuzzy super matrices adn their properties. The final chapter introduces many super fuzzy multi expert models.Comment: 280 page

Anticipation and Risk – From the inverse problem to reverse computation

Abstract. Risk assessment is relevant only if it has predictive relevance. In this sense, the anticipatory perspective has yet to contribute to more adequate predictions. For purely physics-based phenomena, predictions are as good as the science describing such phenomena. For the dynamics of the living, the physics of the matter making up the living is only a partial description of their change over time. The space of possibilities is the missing component, complementary to physics and its associated predictions based on probabilistic methods. The inverse modeling problem, and moreover the reverse computation model guide anticipatory-based predictive methodologies. An experimental setting for the quantification of anticipation is advanced and structural measurement is suggested as a possible mathematics for anticipation-based risk assessment