Surface networks

© Copyright CASA, UCL. The desire to understand and exploit the structure of continuous surfaces is common to researchers in a range of disciplines. Few examples of the varied surfaces forming an integral part of modern subjects include terrain, population density, surface atmospheric pressure, physico-chemical surfaces, computer graphics, and metrological surfaces. The focus of the work here is a group of data structures called Surface Networks, which abstract 2-dimensional surfaces by storing only the most important (also called fundamental, critical or surface-specific) points and lines in the surfaces. Surface networks are intelligent and “natural ” data structures because they store a surface as a framework of “surface ” elements unlike the DEM or TIN data structures. This report presents an overview of the previous works and the ideas being developed by the authors of this report. The research on surface networks has fou

Multi-Atlas Segmentation using Partially Annotated Data: Methods and Annotation Strategies

Multi-atlas segmentation is a widely used tool in medical image analysis, providing robust and accurate results by learning from annotated atlas datasets. However, the availability of fully annotated atlas images for training is limited due to the time required for the labelling task. Segmentation methods requiring only a proportion of each atlas image to be labelled could therefore reduce the workload on expert raters tasked with annotating atlas images. To address this issue, we first re-examine the labelling problem common in many existing approaches and formulate its solution in terms of a Markov Random Field energy minimisation problem on a graph connecting atlases and the target image. This provides a unifying framework for multi-atlas segmentation. We then show how modifications in the graph configuration of the proposed framework enable the use of partially annotated atlas images and investigate different partial annotation strategies. The proposed method was evaluated on two Magnetic Resonance Imaging (MRI) datasets for hippocampal and cardiac segmentation. Experiments were performed aimed at (1) recreating existing segmentation techniques with the proposed framework and (2) demonstrating the potential of employing sparsely annotated atlas data for multi-atlas segmentation

Recurrence-based time series analysis by means of complex network methods

Complex networks are an important paradigm of modern complex systems sciences which allows quantitatively assessing the structural properties of systems composed of different interacting entities. During the last years, intensive efforts have been spent on applying network-based concepts also for the analysis of dynamically relevant higher-order statistical properties of time series. Notably, many corresponding approaches are closely related with the concept of recurrence in phase space. In this paper, we review recent methodological advances in time series analysis based on complex networks, with a special emphasis on methods founded on recurrence plots. The potentials and limitations of the individual methods are discussed and illustrated for paradigmatic examples of dynamical systems as well as for real-world time series. Complex network measures are shown to provide information about structural features of dynamical systems that are complementary to those characterized by other methods of time series analysis and, hence, substantially enrich the knowledge gathered from other existing (linear as well as nonlinear) approaches.Comment: To be published in International Journal of Bifurcation and Chaos (2011

How complex climate networks complement eigen techniques for the statistical analysis of climatological data

Eigen techniques such as empirical orthogonal function (EOF) or coupled pattern (CP) / maximum covariance analysis have been frequently used for detecting patterns in multivariate climatological data sets. Recently, statistical methods originating from the theory of complex networks have been employed for the very same purpose of spatio-temporal analysis. This climate network (CN) analysis is usually based on the same set of similarity matrices as is used in classical EOF or CP analysis, e.g., the correlation matrix of a single climatological field or the cross-correlation matrix between two distinct climatological fields. In this study, formal relationships as well as conceptual differences between both eigen and network approaches are derived and illustrated using exemplary global precipitation, evaporation and surface air temperature data sets. These results allow to pinpoint that CN analysis can complement classical eigen techniques and provides additional information on the higher-order structure of statistical interrelationships in climatological data. Hence, CNs are a valuable supplement to the statistical toolbox of the climatologist, particularly for making sense out of very large data sets such as those generated by satellite observations and climate model intercomparison exercises.Comment: 18 pages, 11 figure

Fly with me : algorithms and methods for influencing a flock

As robots become more affordable, they will begin to exist in the world in greater quantities. Some of these robots will likely be designed to act as components in specific teams. These teams could work on tasks that are too large or complex for a single robot - or that are merely more efficiently accomplished by a team - such as surveillance in a large building or product delivery to packers in a warehouse. Multiagent systems research studies how these teams are formed and how they work together. Ad hoc teamwork, a newer area of multiagent systems research, studies how new robots can join these pre-existing teams and assist the team in accomplishing its goal. This dissertation extends and applies research in ad hoc teamwork towards the general area of flocking, which is an emergent swarm behavior. In particular, the work in this dissertation considers how ad hoc agents - called influencing agents in this dissertation - can join a flock, be recognized by the rest of the flock as part of the flock, influence the flock towards particular behaviors through their own behavior, and then separate from the flock. Specifically, the primary research question addressed in this dissertation is How can influencing agents be utilized in various types of flocks to influence the flock towards a particular behavior? In order to address this research question, this dissertation makes six main types of contributions. First, this dissertation formalizes the problem of using influencing agents to influence a flock. Second, this dissertation contributes and analyzes algorithms for influencing a flock to a desired orientation. Third, this dissertation presents methods for determining how to best add influencing agents to a flock. Fourth, this dissertation provides methods by which influencing agents can join and then leave a flock in motion. Fifth, this dissertation evaluates some of the influencing agent algorithms on a robot platform. Sixth, although the majority of this dissertation assumes the influencing agents will join a flock that behaves similarly to European starlings, this dissertation also provides insight into when and how its algorithms are generalizable to other types of flocks as well as to general teamwork and coordination research. All of the methods presented in this dissertation are empirically evaluated using a simulator that can support large flocks.Computer Science

The role of bot squads in the political propaganda on Twitter

Social Media are nowadays the privileged channel for information spreading and news checking. Unexpectedly for most of the users, automated accounts, also known as social bots, contribute more and more to this process of news spreading. Using Twitter as a benchmark, we consider the traffic exchanged, over one month of observation, on a specific topic, namely the migration flux from Northern Africa to Italy. We measure the significant traffic of tweets only, by implementing an entropy-based null model that discounts the activity of users and the virality of tweets. Results show that social bots play a central role in the exchange of significant content. Indeed, not only the strongest hubs have a number of bots among their followers higher than expected, but furthermore a group of them, that can be assigned to the same political tendency, share a common set of bots as followers. The retwitting activity of such automated accounts amplifies the presence on the platform of the hubs' messages.Comment: Under Submissio

ChoiceRank: Identifying Preferences from Node Traffic in Networks

Understanding how users navigate in a network is of high interest in many applications. We consider a setting where only aggregate node-level traffic is observed and tackle the task of learning edge transition probabilities. We cast it as a preference learning problem, and we study a model where choices follow Luce's axiom. In this case, the $O(n)$ marginal counts of node visits are a sufficient statistic for the $O(n^2)$ transition probabilities. We show how to make the inference problem well-posed regardless of the network's structure, and we present ChoiceRank, an iterative algorithm that scales to networks that contains billions of nodes and edges. We apply the model to two clickstream datasets and show that it successfully recovers the transition probabilities using only the network structure and marginal (node-level) traffic data. Finally, we also consider an application to mobility networks and apply the model to one year of rides on New York City's bicycle-sharing system.Comment: Accepted at ICML 201