6,412 research outputs found
Visualization and Cell Data Analysis Tool based on XML Log Files
Mobility management is an essential feature of cellular networks. High accuracy of mobile user positioning is needed to handle mobility efficiently enough and bad cell data can harm this feature significantly. Inaccuracy of cell shapes, lack of cell data measurements, and inaccurate coordination in a geographical area are major shortcomings when it comes to positioning of mobile users in cellular networks. This paper describes a tool that visualizes and analyzes cell data based on XML log files. The tool evaluates a mathematical expression to identify bad cells from the log file and successfully fixes most of the bad cells identified. The tool repairs bad cell shapes in order to achieve better positioning of mobile users
bdbms -- A Database Management System for Biological Data
Biologists are increasingly using databases for storing and managing their
data. Biological databases typically consist of a mixture of raw data,
metadata, sequences, annotations, and related data obtained from various
sources. Current database technology lacks several functionalities that are
needed by biological databases. In this paper, we introduce bdbms, an
extensible prototype database management system for supporting biological data.
bdbms extends the functionalities of current DBMSs to include: (1) Annotation
and provenance management including storage, indexing, manipulation, and
querying of annotation and provenance as first class objects in bdbms, (2)
Local dependency tracking to track the dependencies and derivations among data
items, (3) Update authorization to support data curation via content-based
authorization, in contrast to identity-based authorization, and (4) New access
methods and their supporting operators that support pattern matching on various
types of compressed biological data types. This paper presents the design of
bdbms along with the techniques proposed to support these functionalities
including an extension to SQL. We also outline some open issues in building
bdbms.Comment: This article is published under a Creative Commons License Agreement
(http://creativecommons.org/licenses/by/2.5/.) You may copy, distribute,
display, and perform the work, make derivative works and make commercial use
of the work, but, you must attribute the work to the author and CIDR 2007.
3rd Biennial Conference on Innovative Data Systems Research (CIDR) January
710, 2007, Asilomar, California, US
Computational Steering in the Problem Solving Environment WBCSim
Computational steering allows scientists to interactively control a numerical experiment and adjust parameters of the computation on-the-fly and explore “what if ” analysis. Computational steering effectively reduces computational time, makes research more efficient, and opens up new product design opportunities. There are several problem solving environments (PSEs) featuring computational steering. However, there is hardly any work explaining how to enable computational steering for PSEs embedded with legacy simulation codes. This paper describes a practical approach to implement computational steering for such PSEs by using WBCSim as an example. WBCSim is a Web based simulation system designed to increase the productivity of wood scientists conducting research on wood-based composites manufacturing processes. WBCSim serves as a prototypical example for the design, construction, and evaluation of small-scale PSEs. Various changes have been made to support computational steering across the three layers—client, server, developer—comprising the WBCSim system. A detailed description of the WBCSim system architecture is presented, along with a typical scenario of computational steering usage
The Weight Function in the Subtree Kernel is Decisive
Tree data are ubiquitous because they model a large variety of situations,
e.g., the architecture of plants, the secondary structure of RNA, or the
hierarchy of XML files. Nevertheless, the analysis of these non-Euclidean data
is difficult per se. In this paper, we focus on the subtree kernel that is a
convolution kernel for tree data introduced by Vishwanathan and Smola in the
early 2000's. More precisely, we investigate the influence of the weight
function from a theoretical perspective and in real data applications. We
establish on a 2-classes stochastic model that the performance of the subtree
kernel is improved when the weight of leaves vanishes, which motivates the
definition of a new weight function, learned from the data and not fixed by the
user as usually done. To this end, we define a unified framework for computing
the subtree kernel from ordered or unordered trees, that is particularly
suitable for tuning parameters. We show through eight real data classification
problems the great efficiency of our approach, in particular for small
datasets, which also states the high importance of the weight function.
Finally, a visualization tool of the significant features is derived.Comment: 36 page
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