416 research outputs found
Knowledge Rich Natural Language Queries over Structured Biological Databases
Increasingly, keyword, natural language and NoSQL queries are being used for
information retrieval from traditional as well as non-traditional databases
such as web, document, image, GIS, legal, and health databases. While their
popularity are undeniable for obvious reasons, their engineering is far from
simple. In most part, semantics and intent preserving mapping of a well
understood natural language query expressed over a structured database schema
to a structured query language is still a difficult task, and research to tame
the complexity is intense. In this paper, we propose a multi-level
knowledge-based middleware to facilitate such mappings that separate the
conceptual level from the physical level. We augment these multi-level
abstractions with a concept reasoner and a query strategy engine to dynamically
link arbitrary natural language querying to well defined structured queries. We
demonstrate the feasibility of our approach by presenting a Datalog based
prototype system, called BioSmart, that can compute responses to arbitrary
natural language queries over arbitrary databases once a syntactic
classification of the natural language query is made
Web service composition: A survey of techniques and tools
Web services are a consolidated reality of the modern Web with tremendous, increasing impact on everyday computing tasks. They turned the Web into the largest, most accepted, and most vivid distributed computing platform ever. Yet, the use and integration of Web services into composite services or applications, which is a highly sensible and conceptually non-trivial task, is still not unleashing its full magnitude of power. A consolidated analysis framework that advances the fundamental understanding of Web service composition building blocks in terms of concepts, models, languages, productivity support techniques, and tools is required. This framework is necessary to enable effective exploration, understanding, assessing, comparing, and selecting service composition models, languages, techniques, platforms, and tools. This article establishes such a framework and reviews the state of the art in service composition from an unprecedented, holistic perspective
Technologies and Applications for Big Data Value
This open access book explores cutting-edge solutions and best practices for big data and data-driven AI applications for the data-driven economy. It provides the reader with a basis for understanding how technical issues can be overcome to offer real-world solutions to major industrial areas. The book starts with an introductory chapter that provides an overview of the book by positioning the following chapters in terms of their contributions to technology frameworks which are key elements of the Big Data Value Public-Private Partnership and the upcoming Partnership on AI, Data and Robotics. The remainder of the book is then arranged in two parts. The first part âTechnologies and Methodsâ contains horizontal contributions of technologies and methods that enable data value chains to be applied in any sector. The second part âProcesses and Applicationsâ details experience reports and lessons from using big data and data-driven approaches in processes and applications. Its chapters are co-authored with industry experts and cover domains including health, law, finance, retail, manufacturing, mobility, and smart cities. Contributions emanate from the Big Data Value Public-Private Partnership and the Big Data Value Association, which have acted as the European data community's nucleus to bring together businesses with leading researchers to harness the value of data to benefit society, business, science, and industry. The book is of interest to two primary audiences, first, undergraduate and postgraduate students and researchers in various fields, including big data, data science, data engineering, and machine learning and AI. Second, practitioners and industry experts engaged in data-driven systems, software design and deployment projects who are interested in employing these advanced methods to address real-world problems
A formal architecture-centric and model driven approach for the engineering of science gateways
From n-Tier client/server applications, to more complex academic Grids, or even the most recent and promising industrial Clouds, the last decade has witnessed significant developments in distributed computing. In spite of this conceptual heterogeneity, Service-Oriented Architecture (SOA) seems to have emerged as the common and underlying abstraction paradigm, even though different standards and technologies are applied across application domains. Suitable access to data and algorithms resident in SOAs via so-called âScience Gatewaysâ has thus become a pressing need in order to realize the benefits of distributed computing infrastructures.In an attempt to inform service-oriented systems design and developments in Grid-based biomedical research infrastructures, the applicant has consolidated work from three complementary experiences in European projects, which have developed and deployed large-scale production quality infrastructures and more recently Science Gateways to support research in breast cancer, pediatric diseases and neurodegenerative pathologies respectively. In analyzing the requirements from these biomedical applications the applicant was able to elaborate on commonly faced issues in Grid development and deployment, while proposing an adapted and extensible engineering framework. Grids implement a number of protocols, applications, standards and attempt to virtualize and harmonize accesses to them. Most Grid implementations therefore are instantiated as superposed software layers, often resulting in a low quality of services and quality of applications, thus making design and development increasingly complex, and rendering classical software engineering approaches unsuitable for Grid developments.The applicant proposes the application of a formal Model-Driven Engineering (MDE) approach to service-oriented developments, making it possible to define Grid-based architectures and Science Gateways that satisfy quality of service requirements, execution platform and distribution criteria at design time. An novel investigation is thus presented on the applicability of the resulting grid MDE (gMDE) to specific examples and conclusions are drawn on the benefits of this approach and its possible application to other areas, in particular that of Distributed Computing Infrastructures (DCI) interoperability, Science Gateways and Cloud architectures developments
Technologies and Applications for Big Data Value
This open access book explores cutting-edge solutions and best practices for big data and data-driven AI applications for the data-driven economy. It provides the reader with a basis for understanding how technical issues can be overcome to offer real-world solutions to major industrial areas. The book starts with an introductory chapter that provides an overview of the book by positioning the following chapters in terms of their contributions to technology frameworks which are key elements of the Big Data Value Public-Private Partnership and the upcoming Partnership on AI, Data and Robotics. The remainder of the book is then arranged in two parts. The first part âTechnologies and Methodsâ contains horizontal contributions of technologies and methods that enable data value chains to be applied in any sector. The second part âProcesses and Applicationsâ details experience reports and lessons from using big data and data-driven approaches in processes and applications. Its chapters are co-authored with industry experts and cover domains including health, law, finance, retail, manufacturing, mobility, and smart cities. Contributions emanate from the Big Data Value Public-Private Partnership and the Big Data Value Association, which have acted as the European data community's nucleus to bring together businesses with leading researchers to harness the value of data to benefit society, business, science, and industry. The book is of interest to two primary audiences, first, undergraduate and postgraduate students and researchers in various fields, including big data, data science, data engineering, and machine learning and AI. Second, practitioners and industry experts engaged in data-driven systems, software design and deployment projects who are interested in employing these advanced methods to address real-world problems
Big Data Management Using Scientific Workflows
Humanity is rapidly approaching a new era, where every sphere of activity will be informed by the ever-increasing amount of data. Making use of big data has the potential to improve numerous avenues of human activity, including scientific research, healthcare, energy, education, transportation, environmental science, and urban planning, just to name a few. However, making such progress requires managing terabytes and even petabytes of data, generated by billions of devices, products, and events, often in real time, in different protocols, formats and types. The volume, velocity, and variety of big data, known as the 3 Vs , present formidable challenges, unmet by the traditional data management approaches. Traditionally, many data analyses have been performed using scientific workflows, tools for formalizing and structuring complex computational processes. While scientific workflows have been used extensively in structuring complex scientific data analysis processes, little work has been done to enable scientific workflows to cope with the three big data challenges on the one hand, and to leverage the dynamic resource provisioning capability of cloud computing to analyze big data on the other hand.
In this dissertation, to facilitate efficient composition, verification, and execution of distributed large-scale scientific workflows, we first propose a formal approach to scientific workflow verification, including a workflow model, and the notion of a well-typed workflow. Our approach translates a scientific workflow into an equivalent typed lambda expression, and typechecks the workflow. We then propose a typetheoretic approach to the shimming problem in scientific workflows, which occurs when connecting related but incompatible components. We reduce the shimming problem to a runtime coercion problem in the theory of type systems, and propose a fully automated and transparent solution. Our technique algorithmically inserts invisible shims into the workflow specification, thereby resolving the shimming problem for any well-typed workflow. Next, we identify a set of important challenges for running big data workflows in the cloud. We then propose a generic, implementation-independent system architecture that addresses many of these challenges. Finally, we develop a cloud-enabled big data workflow management system, called DATAVIEW, that delivers a specific implementation of our proposed architecture. To further validate our proposed architecture, we conduct a case study in which we design and run a big data workflow from the automotive domain using the Amazon EC2 cloud environment
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