Increased Hematopoietic Extracellular RNAs and Vesicles in the Lung during Allergic Airway Responses.

Extracellular RNAs (exRNAs) can be released by numerous cell types in vitro, are often protected within vesicles, and can modify recipient cell function. To determine how the composition and cellular sources of exRNAs and the extracellular vesicles (EVs) that carry them change in vivo during tissue inflammation, we analyzed bronchoalveolar lavage fluid (BALF) from mice before and after lung allergen challenge. In the lung, extracellular microRNAs (ex-miRNAs) had a composition that was highly correlated with airway-lining epithelium. Using cell type-specific membrane tagging and single vesicle flow, we also found that 80% of detected vesicles were of epithelial origin. After the induction of allergic airway inflammation, miRNAs selectively expressed by immune cells, including miR-223 and miR-142a, increased and hematopoietic-cell-derived EVs also increased >2-fold. These data demonstrate that infiltrating immune cells release ex-miRNAs and EVs in inflamed tissues to alter the local extracellular environment

A case study in open source innovation: developing the Tidepool Platform for interoperability in type 1 diabetes management.

OBJECTIVE:Develop a device-agnostic cloud platform to host diabetes device data and catalyze an ecosystem of software innovation for type 1 diabetes (T1D) management. MATERIALS AND METHODS:An interdisciplinary team decided to establish a nonprofit company, Tidepool, and build open-source software. RESULTS:Through a user-centered design process, the authors created a software platform, the Tidepool Platform, to upload and host T1D device data in an integrated, device-agnostic fashion, as well as an application ("app"), Blip, to visualize the data. Tidepool's software utilizes the principles of modular components, modern web design including REST APIs and JavaScript, cloud computing, agile development methodology, and robust privacy and security. DISCUSSION:By consolidating the currently scattered and siloed T1D device data ecosystem into one open platform, Tidepool can improve access to the data and enable new possibilities and efficiencies in T1D clinical care and research. The Tidepool Platform decouples diabetes apps from diabetes devices, allowing software developers to build innovative apps without requiring them to design a unique back-end (e.g., database and security) or unique ways of ingesting device data. It allows people with T1D to choose to use any preferred app regardless of which device(s) they use. CONCLUSION:The authors believe that the Tidepool Platform can solve two current problems in the T1D device landscape: 1) limited access to T1D device data and 2) poor interoperability of data from different devices. If proven effective, Tidepool's open source, cloud model for health data interoperability is applicable to other healthcare use cases

Site Interiography and Geophysical Scanning: Interpreting the Texture and Form of Archaeological Deposits with Ground-Penetrating Radar

The remarkable potential of geophysical scanning—to assess the internal variability of sites in new ways, to highlight important phenomena in the field, to exercise co-creation of interpretation and commitment to minimal destruction of community partners’ resources, and to aid in the practice of due diligence in avoiding desecration of the sacred—continues to be underutilized in archaeology. While archaeological artifacts, features, and strata remain primary foci of archaeological geophysics, these phenomena are perceived quite differently in scans than in visual or tactile exposures. In turn, new registers of site exploration afforded by geophysical prospection may be constrained by the language of site excavation and visual observation, requiring adjustments in the ways of thinking about and describing what the instruments are measuring. The texture and form of site deposits as rendered in ground-penetrating radar scans can be examined in detail prior to making interpretations of cultural features or stratigraphy. Far more than simple “anomalies” demanding our attention for excavation, patterns in geophysical data can be the focus of extensive archaeological analysis prior to, in conjunction with, or independent from excavation

Monitoring Self & World: A Novel Network Model of Hallucinations in Schizophrenia

Schizophrenia (Sz) is a psychotic disorder characterized by multifaceted symptoms including hallucinations (e.g. vivid perceptions that occur in the absence of external stimuli). Auditory hallucinations are the most common type of hallucination in Sz; roughly 70 percent of Sz patients report hearing voices specifically (e.g. auditory verbal hallucinations). Prior functional magnetic resonance imaging (fMRI) studies have provided initial insights into the neural mechanisms underlying hallucinations, implicating an anatomically-distributed network of cortical (sensory, insular, and inferior frontal cortex) and subcortical (hippocampal, striatal) regions. Yet, it remains unclear how this distributed network gives rise to hallucinations impacting different sensory modalities. The insular cortex is a central hub of a larger functional network called the salience network. By regulating default-mode network activity (associated with internally-directed thought), and fronto-parietal network activity (associated with externally-directed attention), the salience network is able to orient our attention to the most pressing matters (e.g. bodily pain, environmental threats, etc.). Abnormal salience monitoring is thought to underlie Sz symptoms; improper monitoring of salient internal events (e.g. auditory-verbal imagery, visual images) plausibly generates hallucinations, but no prior study has directly tested this hypothesis by exploring how sensory networks interact with the salience network in the context of hallucinations in Sz. This dissertation project combined exploratory and hypothesis-driven approaches to delineate functional neural markers of Sz symptoms. The first analysis explored the relationship between Sz symptom expression and altered functional communication between salience and default-mode networks. The second analysis explored fMRI signal fluctuations associated with modality-dependent (e.g. auditory, visual) hallucinations. The final analysis tested the hypothesis that abnormal functional communication between salience and sensory (e.g. auditory, visual) networks underlies hallucinations in Sz. The results suggest that there are three key players in the generation of auditory hallucinations in Sz: auditory cortex, hippocampus, and salience network. A novel functional network model of auditory hallucinations is proposed to account for these findings