3,188 research outputs found

    ConceptScope: Organizing and Visualizing Knowledge in Documents based on Domain Ontology

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    Current text visualization techniques typically provide overviews of document content and structure using intrinsic properties such as term frequencies, co-occurrences, and sentence structures. Such visualizations lack conceptual overviews incorporating domain-relevant knowledge, needed when examining documents such as research articles or technical reports. To address this shortcoming, we present ConceptScope, a technique that utilizes a domain ontology to represent the conceptual relationships in a document in the form of a Bubble Treemap visualization. Multiple coordinated views of document structure and concept hierarchy with text overviews further aid document analysis. ConceptScope facilitates exploration and comparison of single and multiple documents respectively. We demonstrate ConceptScope by visualizing research articles and transcripts of technical presentations in computer science. In a comparative study with DocuBurst, a popular document visualization tool, ConceptScope was found to be more informative in exploring and comparing domain-specific documents, but less so when it came to documents that spanned multiple disciplines.Comment: 19 pages, 5 figure

    A decade of Semantic Web research through the lenses of a mixed methods approach

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    The identification of research topics and trends is an important scientometric activity, as it can help guide the direction of future research. In the Semantic Web area, initially topic and trend detection was primarily performed through qualitative, top-down style approaches, that rely on expert knowledge. More recently, data-driven, bottom-up approaches have been proposed that offer a quantitative analysis of the evolution of a research domain. In this paper, we aim to provide a broader and more complete picture of Semantic Web topics and trends by adopting a mixed methods methodology, which allows for the combined use of both qualitative and quantitative approaches. Concretely, we build on a qualitative analysis of the main seminal papers, which adopt a top-down approach, and on quantitative results derived with three bottom-up data-driven approaches (Rexplore, Saffron, PoolParty), on a corpus of Semantic Web papers published between 2006 and 2015. In this process, we both use the latter for “fact-checking” on the former and also to derive key findings in relation to the strengths and weaknesses of top-down and bottom up approaches to research topic identification. Although we provide a detailed study on the past decade of Semantic Web research, the findings and the methodology are relevant not only for our community but beyond the area of the Semantic Web to other research fields as well

    Affective graphs: the visual appeal of linked data

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    The essence and value of Linked Data lies in the ability of humans and machines to query, access and reason upon highly structured and formalised data. Ontology structures provide an unambiguous description of the structure and content of data. While a multitude of software applications and visualization systems have been developed over the past years for Linked Data, there is still a significant gap that exists between applications that consume Linked Data and interfaces that have been designed with significant focus on aesthetics. Though the importance of aesthetics in affecting the usability, effectiveness and acceptability of user interfaces have long been recognised, little or no explicit attention has been paid to the aesthetics of Linked Data applications. In this paper, we introduce a formalised approach to developing aesthetically pleasing semantic web interfaces by following aesthetic principles and guidelines identified from literature. We apply such principles to design and develop a generic approach of using visualizations to support exploration of Linked Data, in an interface that is pleasing to users. This provides users with means to browse ontology structures, enriched with statistics of the underlying data, facilitating exploratory activities and enabling visual query for highly precise information needs. We evaluated our approach in three ways: an initial objective evaluation comparing our approach with other well-known interfaces for the semantic web and two user evaluations with semantic web researchers

    From Personal Data to Service Innovation – Guiding the Design of New Service Opportunities

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    Stimulated by an ongoing digital transformation, companies obtain a new source for digital service innovation: The use of personal data has the potential to build deeper customer relationships and to develop individualized services. However, methodological support for the systematic application of personal data in innovation processes is still scarce. This paper suggests a comprehensive approach for service design tools that enable collaborative design activities by participants with different data skills to identify new service opportunities. This approach includes the systematic development of customer understanding as well as a process to match customer needs to existing personal data resources. Following a design science research approach, we develop design principles for service design tools and build and evaluate a service opportunity canvas as a first instantiation

    Mayday - integrative analytics for expression data

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    <p>Abstract</p> <p>Background</p> <p>DNA Microarrays have become the standard method for large scale analyses of gene expression and epigenomics. The increasing complexity and inherent noisiness of the generated data makes visual data exploration ever more important. Fast deployment of new methods as well as a combination of predefined, easy to apply methods with programmer's access to the data are important requirements for any analysis framework. Mayday is an open source platform with emphasis on visual data exploration and analysis. Many built-in methods for clustering, machine learning and classification are provided for dissecting complex datasets. Plugins can easily be written to extend Mayday's functionality in a large number of ways. As Java program, Mayday is platform-independent and can be used as Java WebStart application without any installation. Mayday can import data from several file formats, database connectivity is included for efficient data organization. Numerous interactive visualization tools, including box plots, profile plots, principal component plots and a heatmap are available, can be enhanced with metadata and exported as publication quality vector files.</p> <p>Results</p> <p>We have rewritten large parts of Mayday's core to make it more efficient and ready for future developments. Among the large number of new plugins are an automated processing framework, dynamic filtering, new and efficient clustering methods, a machine learning module and database connectivity. Extensive manual data analysis can be done using an inbuilt R terminal and an integrated SQL querying interface. Our visualization framework has become more powerful, new plot types have been added and existing plots improved.</p> <p>Conclusions</p> <p>We present a major extension of Mayday, a very versatile open-source framework for efficient micro array data analysis designed for biologists and bioinformaticians. Most everyday tasks are already covered. The large number of available plugins as well as the extension possibilities using compiled plugins and ad-hoc scripting allow for the rapid adaption of Mayday also to very specialized data exploration. Mayday is available at <url>http://microarray-analysis.org</url>.</p
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