Oximetry use in obstructive sleep apnea

Producción CientíficaIntroduction. Overnight oximetry has been proposed as an accessible, simple, and reliable technique for obstructive sleep apnea syndrome (OSAS) diagnosis. From visual inspection to advanced signal processing, several studies have demonstrated the usefulness of oximetry as a screening tool. However, there is still controversy regarding the general application of oximetry as a single screening methodology for OSAS. Areas covered. Currently, high-resolution portable devices combined with pattern recognition-based applications are able to achieve high performance in the detection this disease. In this review, recent studies involving automated analysis of oximetry by means of advanced signal processing and machine learning algorithms are analyzed. Advantages and limitations are highlighted and novel research lines aimed at improving the screening ability of oximetry are proposed. Expert commentary. Oximetry is a cost-effective tool for OSAS screening in patients showing high pretest probability for the disease. Nevertheless, exhaustive analyses are still needed to further assess unattended oximetry monitoring as a single diagnostic test for sleep apnea, particularly in the pediatric population and in especial groups with significant comorbidities. In the following years, communication technologies and big data analysis will overcome current limitations of simplified sleep testing approaches, changing the detection and management of OSAS.This research has been partially supported by the projects DPI2017-84280-R and RTC-2015-3446-1 from Ministerio de Economía, Industria y Competitividad and European Regional Development Fund (FEDER), the project 66/2016 of the Sociedad Española de Neumología y Cirugía Torácica (SEPAR), and the project VA037U16 from the Consejería de Educación de la Junta de Castilla y León and FEDER. D. Álvarez was in receipt of a Juan de la Cierva grant IJCI-2014-22664 from the Ministerio de Economía y Competitividad

Automatic analysis of overnight airflow to help in the diagnosis of pediatric obstructive sleep apnea

La apnea obstructiva del sueño (AOS) pediátrica es una enfermedad respiratoria altamente prevalente e infradiagnosticada que puede afectar negativamente a las funciones fisiológicas y cognitivas de los niños, causándoles graves deficiencias neurocognitivas, cardiometabólicas y endocrinas. El método estándar para su diagnóstico es la polisomnografía nocturna, una prueba compleja, de elevado coste, altamente intrusiva y poco accesible, lo que genera largas listas de espera y retrasos en el diagnóstico. Por ello, es necesario desarrollar pruebas diagnósticas más sencillas. Una de estas alternativas es el análisis automático de señales cardiorrespiratorias. Así, esta tesis doctoral presenta un compendio de cuatro publicaciones que proponen el uso de novedosos métodos de procesado de señal (no lineal, espectral, bispectral, gráficos de recurrencia y wavelet) que permiten caracterizar exhaustivamente el comportamiento del flujo aéreo nocturno de los niños y simplificar el diagnóstico de la apnea obstructiva del sueño pediátrica.Departamento de Teoría de la Señal y Comunicaciones e Ingeniería TelemáticaDoctorado en Tecnologías de la Información y las Telecomunicacione

Wavelet analysis of overnight airflow to detect obstructive sleep apnea in children

Producción CientíficaThis study focused on the automatic analysis of the airflow signal (AF) to aid in the diagnosis of pediatric obstructive sleep apnea (OSA). Thus, our aims were: (i) to characterize the overnight AF characteristics using discrete wavelet transform (DWT) approach, (ii) to evaluate its diagnostic utility, and (iii) to assess its complementarity with the 3% oxygen desaturation index (ODI3). In order to reach these goals, we analyzed 946 overnight pediatric AF recordings in three stages: (i) DWT-derived feature extraction, (ii) feature selection, and (iii) pattern recognition. AF recordings from OSA patients showed both lower detail coefficients and decreased activity associated with the normal breathing band. Wavelet analysis also revealed that OSA disturbed the frequency and energy distribution of the AF signal, increasing its irregularity. Moreover, the information obtained from the wavelet analysis was complementary to ODI3. In this regard, the combination of both wavelet information and ODI3 achieved high diagnostic accuracy using the common OSA-positive cutoffs: 77.97%, 81.91%, and 90.99% (AdaBoost.M2), and 81.96%, 82.14%, and 90.69% (Bayesian multi-layer perceptron) for 1, 5, and 10 apneic events/hour, respectively. Hence, these findings suggest that DWT properly characterizes OSA-related severity as embedded in nocturnal AF, and could simplify the diagnosis of pediatric OSA.Ministerio de Ciencia, Innovación y Universidades, Agencia Estatal de Investigación y Fondo Europeo de Desarrollo Regional (FEDER) - (Projects DPI2017-84280-R and RTC-2017-6516-1)Comisión Europea y Fondo Europeo de Desarrollo Regional (FEDER) - (POCTEP 0702_MIGRAINEE_2_E)Instituto de Salud Carlos III y Fondo Europeo de Desarrollo Regional (FEDER) - (CIBER-BBN)Ministerio de Ciencia e Innovación, Agencia Estatal de Investigación y Fondo Social Europeo - (grant RYC2019- 028566-I)Ministerio de Educación, Cultura y Deporte - (grant FPU16/02938)Institutes of Health - (grants HL130984, HL140548, and AG061824

Diseño y evaluación de metodologías de análisis automático de la oximetría nocturna como método simplificado de detección del síndrome de apnea-hipopnea obstructiva del sueño en niños. Validación en el hospital y en el domicilio.

El síndrome de apnea-hipopnea obstructiva del sueño (SAHOS) es una enfermedad de alta prevalencia en la población infantil, con una importante morbilidad y elevado impacto sociosanitario, en la que la detección precoz es esencial para iniciar un adecuado tratamiento, el cual debe ser siempre individualizado. El SAHOS es una alteración fisiopatológica compleja y multifactorial, en la que no sólo influye una susceptibilidad genética e individual (factores anatómicos y dinámicos), sino también de estilo de vida. Los factores de riesgo más frecuentes son la hipertrofia adenoamigdalar y la obesidad. Los síntomas en los niños son escasos, son principalmente nocturnos y requieren un alto nivel de sospecha. El SAHOS no diagnosticado o no tratado se relaciona con diferentes consecuencias metabólicas, cardiovasculares, neurocognitivas, inflamatorias, conductuales y falta de desarrollo estaturoponderal, lo que conduce a un empeoramiento del estado de salud en términos generales y disminución de calidad de vida.Departamento de Anatomía y RadiologíaDoctorado en Investigación en Ciencias de la Salu

Assessment of airflow and oximetry signals to detect pediatric sleep apnea-hypopnea syndrome using AdaBoost

Producción CientíficaThe reference standard to diagnose pediatric Obstructive Sleep Apnea (OSA) syndrome is an overnight polysomnographic evaluation. When polysomnography is either unavailable or has limited availability, OSA screening may comprise the automatic analysis of a minimum number of signals. The primary objective of this study was to evaluate the complementarity of airflow (AF) and oximetry (SpO2) signals to automatically detect pediatric OSA. Additionally, a secondary goal was to assess the utility of a multiclass AdaBoost classifier to predict OSA severity in children. We extracted the same features from AF and SpO2 signals from 974 pediatric subjects. We also obtained the 3% Oxygen Desaturation Index (ODI) as a common clinically used variable. Then, feature selection was conducted using the Fast Correlation-Based Filter method and AdaBoost classifiers were evaluated. Models combining ODI 3% and AF features outperformed the diagnostic performance of each signal alone, reaching 0.39 Cohens’s kappa in the four-class classification task. OSA vs. No OSA accuracies reached 81.28%, 82.05% and 90.26% in the apnea–hypopnea index cutoffs 1, 5 and 10 events/h, respectively. The most relevant information from SpO2 was redundant with ODI 3%, and AF was complementary to them. Thus, the joint analysis of AF and SpO2 enhanced the diagnostic performance of each signal alone using AdaBoost, thereby enabling a potential screening alternative for OSA in children.Ministerio de Ciencia e Innovación - FEDER (DPI2017-84280-R y RTC-2017-6516-1)Comisión Europea - FEDER (Programa de Cooperación Interreg V-A España-Portugal POCTEP 2014–2020)Ministerio de Ciencia e Innovación - Ministerio de Universidades (PRE2018-085219)US National Institutes of Health (grants HL130984 and HL140548

Sleep Apnea Detection Using Multi-Error-Reduction Classification System with Multiple Bio-Signals.

INTRODUCTION: Obstructive sleep apnea (OSA) can cause serious health problems such as hypertension or cardiovascular disease. The manual detection of apnea is a time-consuming task, and automatic diagnosis is much more desirable. The contribution of this work is to detect OSA using a multi-error-reduction (MER) classification system with multi-domain features from bio-signals. METHODS: Time-domain, frequency-domain, and non-linear analysis features are extracted from oxygen saturation (SaO2), ECG, airflow, thoracic, and abdominal signals. To analyse the significance of each feature, we design a two-stage feature selection. Stage 1 is the statistical analysis stage, and Stage 2 is the final feature subset selection stage using machine learning methods. In Stage 1, two statistical analyses (the one-way analysis of variance (ANOVA) and the rank-sum test) provide a list of the significance level of each kind of feature. Then, in Stage 2, the support vector machine (SVM) algorithm is used to select a final feature subset based on the significance list. Next, an MER classification system is constructed, which applies a stacking with a structure that consists of base learners and an artificial neural network (ANN) meta-learner. RESULTS: The Sleep Heart Health Study (SHHS) database is used to provide bio-signals. A total of 66 features are extracted. In the experiment that involves a duration parameter, 19 features are selected as the final feature subset because they provide a better and more stable performance. The SVM model shows good performance (accuracy = 81.68%, sensitivity = 97.05%, and specificity = 66.54%). It is also found that classifiers have poor performance when they predict normal events in less than 60 s. In the next experiment stage, the time-window segmentation method with a length of 60s is used. After the above two-stage feature selection procedure, 48 features are selected as the final feature subset that give good performance (accuracy = 90.80%, sensitivity = 93.95%, and specificity = 83.82%). To conduct the classification, Gradient Boosting, CatBoost, Light GBM, and XGBoost are used as base learners, and the ANN is used as the meta-learner. The performance of this MER classification system has the accuracy of 94.66%, the sensitivity of 96.37%, and the specificity of 90.83%

Extracción, selección y clasificación automática de características de la señal de oximetría en la detección del síndrome de apnea-hipopnea del sueño en niños

El Síndrome de la Apnea Hipopnea del Sueño (SAHS) en la infancia es un trastorno respiratorio del sueño caracterizado por una obstrucción parcial y/o completa de la vía aérea superior. El SAHS tiene una prevalencia de entre el 1 y el 5% y puede originar múltiples consecuencias negativas para la salud y el desarrollo de los niños, como déficit neurocognitivo, retraso del crecimiento o disfunción cardiaca. La técnica diagnóstica de referencia es la polisomnografía (PSG), que es un método complejo, costoso, altamente intrusivo y de disponibilidad limitada. Estas limitaciones han favorecido la aparición de alternativas más sencillas enfocadas principalmente al análisis automático de un conjunto reducido de señales. Este trabajo se ha desarrollado bajo la hipótesis de que el análisis automático de la señal de SpO2 puede proporcionar información relevante en la ayuda al diagnóstico del SAHS infantil. En este trabajo se ha analizado la señal de saturación de oxígeno en sangre (SpO2) procedente de la oximetría nocturna con el objetivo de evaluar su capacidad diagnóstica. Para ello se ha contado con 981 registros (583 SAHS negativo y 398 SAHS positivo) procedentes del Comer Children's Hospital de la Universidad de Chicago. Estos registros pertenecen a niños de ambos sexos de 0 a 13 años con signos y síntomas indicativos de SAHS.Departamento de Teoría de la Señal y Comunicaciones e Ingeniería TelemáticaMáster en Ingeniería de Telecomunicació

Utilidad de las señales de oximetría y flujo aéreo en el diagnóstico simplificado de la apnea obstructiva del sueño. Diseño de un test automático domiciliario

Obstructive Sleep Apnea (OSA) is a respiratory disorder characterized by recurrent episodes of total (apnea) or partial (hypopnea) absence of airflow during sleep. Untreated OSA produces a significant decrease in quality of life and is associated with the main causes of mortality in industrialized countries.However, OSA is considered an underdiagnosed chronic disease. Continuous positive airway pressure (CPAP) is the most common therapeutic option. Nocturnal polysomnography (PSG) in a specialized sleep unit is the reference diagnostic method, although it has low availability and accessibility. Consequently, in recent years there has been a significant demand for abbreviated methods, most of them at home, to reduce waiting lists. The fundamental hypothesis that the use of automatic processing techniques based on machine learning tools could allow maximizing the diagnostic accuracy of a reduced set of combined biomedical signals: overnight oximetry and airflow recorded at patient&#8217;s home. The main objective was to evaluate whether the joint analysis by means of machine learning algorithms of unsupervised SpO2 and AF signals acquired at patient's home leads to a significant increase in diagnostic performance compared to single-channel approaches. A prospective observational study was carried out in which a population referred consecutively to the Sleep Unit showing moderate-to-high clinical suspicion of having OSA was analyzed.All patients underwent an unsupervised PSG at home(gold standard) from which the SpO2 and AF signals were extracted, which were subsequently processed offline.The apnea-hypopnea index(AHI) derived from the PSG was used to confirm or rule out the presence of the disease.Three different approaches for screening patients with suspected OSA were assessed in terms of the source of information used: single-channel based on SpO2, single-channel based on AF, and two-channel combining information from both SpO2 and AF.The automatic processing of the SpO2 and AF signals was developed in 4 stages: preprocessing, feature extraction, feature selection, and pattern recognition. Unsupervised SpO2 and AF recordings were parameterized using the fast correlation-based filter(FCBF)algorithm.The following machine learning methods were used: linear regression(MLR), multilayer perceptron neural networks(MLP) and support vector machines(SVM). The population was divided into independent training and test groups. Agreement between the estimated and the actual AHIderived from at-home PSG was assessed, and typical OSA cutoff points(5, 15, and 30 events/h) were applied. A total of 299 unattended PSGs were performed at home, with a validity percentage of 85.6%. The highest agreement between the estimated AHI and the PSG AHI was reached by the SVMSpO2+AF model, with an CCI 0.93 and a 4-class kappa index 0.71, as well as with an overall accuracy for the 4 OSA severity categories equal to 81.25%, significantly higher than the individual analysis of the SpO2 signal and the airflow signal.The SVMSpO2+AF model achieved the highest diagnostic performance of all algorithms for the detection of severe OSA, with an accuracy of 95.83% and AUC ROC 0.98. In addition, the AUC ROC of the dual-channel models was significantly higher (p<0.01) than that achieved by all the single-channel approaches for the cutoff of 15events/h. The proposed methodology based on the joint automatic analysis of the SpO2 and AF signals acquired at home showed a high complementarity that led to a remarkable increase in diagnostic performance compared to single-channel approaches. The automatic models outperformed the conventional indices(desaturation and airflow-derived indexes) both in terms of correlation and concordance with the AHI from PSG, as well as in terms of overall diagnostic accuracy, providing a moderate increase in diagnostic performance, particularly in the detection of moderate-to-severe OSA.Our findings suggest that the joint analysis of oximetry and airflow signals by means of machine learning methods allows a simplified as well as accurate screening of OSA at patient's home.La Apnea Obstructiva del Sueño (AOS) es un trastorno respiratorio crónico infradiagnosticado caracterizado por la repetición recurrente de episodios de ausencia total (apnea) o parcial (hipopnea) del flujo aéreo (FA) durante el sueño, que disminuye la calidad de vida y aumenta la mortalidad. La CPAP es el tratamiento más habitual, no invasivo, eficaz y coste-efectivo, por lo que favorecer el proceso de diagnóstico es fundamental. La PSG nocturna es el método diagnóstico de referencia, presentando baja disponibilidad y accesibilidad, lo que ha contribuido a desbordar los recursos disponibles, retrasando el diagnóstico y el tratamiento. En contexto de la simplificación diagnóstica portátil, en auge, el uso de únicamente una (monocanal) o dos (bi-canal) señales, como las de SpO2 y FA ha sido ampliamente explorado, aunque la mayoría en entornos hospitalarios controlados. La hipótesis se fundamenta en que las técnicas de procesado automático basadas en machine learning podrían maximizar la precisión diagnóstica de un conjunto reducido de señales combinadas. El objetivo consistió en evaluar si el análisis conjunto mediante algoritmos de aprendizaje automático de las señales de SpO2 y FA no supervisadas adquiridas en el domicilio aumenta el rendimiento diagnóstico en comparación con los enfoques de un solo canal. Se llevó a cabo un estudio observacional prospectivo en pacientes con sospecha moderada-alta de AOS. Se realizó una PSG no supervisada en su domicilio (gold standard de referencia), de la que se extrajeron las señales de SpO2 y FA, procesadas offline posteriormente. El índice de apnea-hipopnea (IAH) derivado de la PSG se empleó para confirmar o descartar la presencia de la enfermedad. Se implementaron y compararon 3 metodologías de screening en función de la fuente de información empleada: (1) monocanal basado en SpO2, (2) monocanal basado en FA, (3) bi-canal combinando SpO2 y FA. El procesado automático de las señales de SpO2 y FA se desarrolló en 4 etapas: preprocesado, extracción de características, selección de características (mediante fast correlation-based filter, FCBF) y reconocimiento de patrones. Cada enfoque de screening se empleó para estimar automáticamente el IAH utilizando los siguientes métodos de machine learning: (1) regresión lineal múltiple (MLR), (2) redes neuronales perceptrón multicapa (MLP) y (3) máquinas vector soporte (SVM). La población se dividió en grupos independientes de entrenamiento (60%) y test (40%). Se realizaron un total de 299 PSGs domiciliarias. Los modelos de enfoque combinado bi-canal alcanzaron valores de concordancia entre el IAH estimado y el IAH de la PSG domiciliaria y de rendimiento diagnóstico para todos los puntos de corte típicos de AOS (5, 15 y 30 e/h) superiores al enfoque monocanal. La mayor concordancia fue alcanzada por el modelo SVMSpO2+FA (CCI 0.93, kappa4 clases 0.71, precisión global 81.25%), significativamente superior a los análisis individuales. El modelo SVMSpO2+FA alcanzó el mayor rendimiento diagnóstico de todos los algoritmos para la detección de AOS grave (precisión 95.83% y AUC ROC 0.98). Además, el AUC ROC de los modelos bi-canal fue superior (p <0.01) al de los enfoques monocanal para el punto de corte de 15 e/h. La metodología propuesta basada en el análisis automático conjunto de las señales de SpO2 y FA adquiridas en el domicilio mostró una alta complementariedad y un notable aumento del rendimiento diagnóstico en comparación con los enfoques monocanal. Los modelos automáticos superaron globalmente a los índices clásicos (de desaturación y de eventos de flujo aéreo), aportando un incremento moderado del rendimiento diagnóstico particularmente en la detección de AOS moderado-grave. Los resultados obtenidos indican que el análisis conjunto de las señales de oximetría y flujo mediante métodos de aprendizaje automático permite un screening simplificado a la vez que preciso de la AOS en el domicilio del paciente.Escuela de DoctoradoDoctorado en Investigación en Ciencias de la Salu

Feature extraction and similarity of movement detection during sleep, based on higher order spectra and entropy of the actigraphy signal: Results of the Hispanic Community Health Study/Study of Latinos

[EN] The aim of this work was to develop a new unsupervised exploratory method of characterizing feature extraction and detecting similarity of movement during sleep through actigraphy signals. We here propose some algorithms, based on signal bispectrum and bispectral entropy, to determine the unique features of independent actigraphy signals. Experiments were carried out on 20 randomly chosen actigraphy samples of the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) database, with no information other than their aperiodicity. The Pearson correlation coefficient matrix and the histogram correlation matrix were computed to study the similarity of movements during sleep. The results obtained allowed us to explore the connections between certain sleep actigraphy patterns and certain pathologies.Funding for this study was provided by the authors' departments. J.A.C. acknowledges support from the Ministerio de Economia, Industria y Competitividad, Grant MTM2016-75963-P. J.M.G.-G. y C.S. Ministerio de Ciencia Tecnologia y Telecomunicaciones, Grant DPI2016-80054-R. J.A.C., J.M.G.-G. and C.S. acknowledge support from the European Commission, CrowdHealth project (H2020-SC1-2016-CNECT No. 727560).Iglesias-Martinez, ME.; Garcia-Gomez, JM.; Sáez Silvestre, C.; Fernández De Córdoba, P.; Conejero, JA. (2018). Feature extraction and similarity of movement detection during sleep, based on higher order spectra and entropy of the actigraphy signal: Results of the Hispanic Community Health Study/Study of Latinos. Sensors. 18(12):4310-1-4310-17. https://doi.org/10.3390/s18124310S4310-14310-17181

Diagnosis of the sleep apnea-hypopnea syndrome : a comprehensive approach through an intelligent system to support medical decision

[Abstract] This doctoral thesis carries out the development of an intelligent system to support medical decision in the diagnosis of the Sleep Apnea-Hypopnea Syndrome (SAHS). SAHS is the most common disorder within those affecting sleep. The estimates of the disease prevalence range from 3% to 7%. Diagnosis of SAHS requires of a polysomnographic test (PSG) to be done in the Sleep Unit of a medical center. Manual scoring of the resulting recording entails too much effort and time to the medical specialists and as a consequence it implies a high economic cost. In the developed system, automatic analysis of the PSG is accomplished which follows a comprehensive perspective. Firstly an analysis of the neurophysiological signals related to the sleep function is carried out in order to obtain the hypnogram. Then, an analysis is performed over the respiratory signals which have to be subsequently interpreted in the context of the remaining signals included in the PSG. In order to carry out such a task, the developed system is supported by the use of artificial intelligence techniques, specially focusing on the use of reasoning mechanisms capable of handling data imprecision. Ultimately, it is the aim of the proposed system to improve the diagnostic procedure and help physicians in the diagnosis of SAHS.[Resumen] Esta tesis aborda el desarrollo de un sistema inteligente de apoyo a la decisión clínica para el diagnóstico del Síndrome de Apneas-Hipopneas del Sueño (SAHS). El SAHS es el trastorno más común de aquellos que afectan al sueño. Afecta a un rango del 3% al 7% de la población con consecuencias severas sobre la salud. El diagnóstico requiere la realización de un análisis polisomnográfico (PSG) en una Unidad del Sueño de un centro hospitalario. El análisis manual de dicha prueba resulta muy costoso en tiempo y esfuerzo para el médico especialista, y como consecuencia en un elevado coste económico. El sistema desarrollado lleva a cabo el análisis automático del PSG desde una perspectiva integral. A tal efecto, primero se realiza un análisis de las señales neurofisiológicas vinculadas al sueño para obtener el hipnograma, y seguidamente, se lleva a cabo un análisis neumológico de las señales respiratorias interpretándolas en el contexto que marcan las demás señales del PSG. Para lleva a cabo dicha tarea el sistema se apoya en el uso de distintas técnicas de inteligencia artificial, con especial atención al uso mecanismos de razonamiento con soporte a la imprecisión. El principal objetivo del sistema propuesto es la mejora del procedimiento diagnóstico y ayudar a los médicos en diagnóstico del SAHS.[Resumo] Esta tese aborda o desenvolvemento dun sistema intelixente de apoio á decisión clínica para o diagnóstico do Síndrome de Apneas-Hipopneas do Sono (SAHS). O SAHS é o trastorno máis común daqueles que afectan ao sono. Afecta a un rango do 3% ao 7% da poboación con consecuencias severas sobre a saúde. O diagnóstico pasa pola realización dunha análise polisomnográfica (PSG) nunha Unidade do Sono dun centro hospitalario. A análise manual da devandita proba resulta moi custosa en tempo e esforzo para o médico especialista, e como consecuencia nun elevado custo económico. O sistema desenvolvido leva a cabo a análise automática do PSG dende unha perspectiva integral. A tal efecto, primeiro realizase unha análise dos sinais neurofisiolóxicos vinculados ao sono para obter o hipnograma, e seguidamente, lévase a cabo unha análise neumolóxica dos sinais respiratorios interpretándoos no contexto que marcan os demais sinais do PSG. Para leva a cabo esta tarefa o sistema apoiarase no uso de distintas técnicas de intelixencia artificial, con especial atención a mecanismos de razoamento con soporte para a imprecisión. O principal obxectivo do sistema proposto é a mellora do procedemento diagnóstico e axudar aos médicos no diagnóstico do SAHS