Bacteria classification using Cyranose 320 electronic nose

Background An electronic nose (e-nose), the Cyrano Sciences' Cyranose 320, comprising an array of thirty-two polymer carbon black composite sensors has been used to identify six species of bacteria responsible for eye infections when present at a range of concentrations in saline solutions. Readings were taken from the headspace of the samples by manually introducing the portable e-nose system into a sterile glass containing a fixed volume of bacteria in suspension. Gathered data were a very complex mixture of different chemical compounds. Method Linear Principal Component Analysis (PCA) method was able to classify four classes of bacteria out of six classes though in reality other two classes were not better evident from PCA analysis and we got 74% classification accuracy from PCA. An innovative data clustering approach was investigated for these bacteria data by combining the 3-dimensional scatter plot, Fuzzy C Means (FCM) and Self Organizing Map (SOM) network. Using these three data clustering algorithms simultaneously better 'classification' of six eye bacteria classes were represented. Then three supervised classifiers, namely Multi Layer Perceptron (MLP), Probabilistic Neural network (PNN) and Radial basis function network (RBF), were used to classify the six bacteria classes. Results A [6 × 1] SOM network gave 96% accuracy for bacteria classification which was best accuracy. A comparative evaluation of the classifiers was conducted for this application. The best results suggest that we are able to predict six classes of bacteria with up to 98% accuracy with the application of the RBF network. Conclusion This type of bacteria data analysis and feature extraction is very difficult. But we can conclude that this combined use of three nonlinear methods can solve the feature extraction problem with very complex data and enhance the performance of Cyranose 320

Automated construction of a hierarchy of self-organized neural network classifiers

This paper documents an effort to design and implement a neural network-based, automatic classification system which dynamically constructs and trains a decision tree. The system is a combination of neural network and decision tree technology. The decision tree is constructed to partition a large classification problem into smaller problems. The neural network modules then solve these smaller problems. We used a variant of the Fuzzy ARTMAP neural network which can be trained much more quickly than traditional neural networks. The research extends the concept of self-organization from within the neural network to the overall structure of the dynamically constructed decision hierarchy. The primary advantage is avoidance of manual tedium and subjective bias in constructing decision hierarchies. Additionally, removing the need for manual construction of the hierarchy opens up a large class of potential classification applications. When tested on data from real-world images, the automatically generated hierarchies performed slightly better than an intuitive (handbuilt) hierarchy. Because the neural networks at the nodes of the decision hierarchy are solving smaller problems, generalization performance can really be improved if the number of features used to solve these problems is reduced. Algorithms for automatically selecting which features to use for each individual classification module were also implemented. We were able to achieve the same level of performance as in previous manual efforts, but in an efficient, automatic manner. The technology developed has great potential in a number of commercial areas, including data mining, pattern recognition, and intelligent interfaces for personal computer applications. Sample applications include: fraud detection, bankruptcy prediction, data mining agent, scalable object recognition system, email agent, resource librarian agent, and a decision aid agent