1st INCF Workshop on Sustainability of Neuroscience Databases

The goal of the workshop was to discuss issues related to the sustainability of neuroscience databases, identify problems and propose solutions, and formulate recommendations to the INCF. The report summarizes the discussions of invited participants from the neuroinformatics community as well as from other disciplines where sustainability issues have already been approached. The recommendations for the INCF involve rating, ranking, and supporting database sustainability

Semantic based P2P System for local e-Government

The Electronic Government is an emerging field of applications for the Semantic Web where ontologies are becoming an important research technology. The e-Government faces considerable challenges to achieve interoperability given the semantic differences of interpretation, omplexity and width of scope. This paper addresses the importance of providing an infrastructure capable of dealing with issues such as: communications between public administrations across government and retrieval of official and non official documents in a timely, secure and accurate way at the back office. A semantic peer-to-peer approach is proposed to enhance the information management at the e-Government domain; this approach is integrated with a Government Information Retrieval system and it reuses the EGO Model which can be deployed within the e-Government context

Weaving Entities into Relations: From Page Retrieval to Relation Mining on the Web

With its sheer amount of information, the Web is clearly an important frontier for data mining. While Web mining must start with content on the Web, there is no effective ``search-based'' mechanism to help sifting through the information on the Web. Our goal is to provide a such online search-based facility for supporting query primitives, upon which Web mining applications can be built. As a first step, this paper aims at entity-relation discovery, or E-R discovery, as a useful function-- to weave scattered entities on the Web into coherent relations. To begin with, as our proposal, we formalize the concept of E-R discovery. Further, to realize E-R discovery, as our main thesis, we abstract tuple ranking-- the essential challenge of E-R discovery-- as pattern-based cooccurrence analysis. Finally, as our key insight, we observe that such relation mining shares the same core functions as traditional page-retrieval systems, which enables us to build the new E-R discovery upon today's search engines, almost for free. We report our system prototype and testbed, WISDM-ER, with real Web corpus. Our case studies have demonstrated a high promise, achieving 83%-91% accuracy for real benchmark queries-- and thus the real possibilities of enabling ad-hoc Web mining tasks with online E-R discovery

Grid-based semantic integration of heterogeneous data resources: Implementation on a HealthGrid

This thesis was submitted for the degree of Doctor of Philosophy and was awarded by Brunel University.The semantic integration of geographically distributed and heterogeneous data resources still remains a key challenge in Grid infrastructures. Today's mainstream Grid technologies hold the promise to meet this challenge in a systematic manner, making data applications more scalable and manageable. The thesis conducts a thorough investigation of the problem, the state of the art, and the related technologies, and proposes an Architecture for Semantic Integration of Data Sources (ASIDS) addressing the semantic heterogeneity issue. It defines a simple mechanism for the interoperability of heterogeneous data sources in order to extract or discover information regardless of their different semantics. The constituent technologies of this architecture include Globus Toolkit (GT4) and OGSA-DAI (Open Grid Service Architecture Data Integration and Access) alongside other web services technologies such as XML (Extensive Markup Language). To show this, the ASIDS architecture was implemented and tested in a realistic setting by building an exemplar application prototype on a HealthGrid (pilot implementation). The study followed an empirical research methodology and was informed by extensive literature surveys and a critical analysis of the relevant technologies and their synergies. The two literature reviews, together with the analysis of the technology background, have provided a good overview of the current Grid and HealthGrid landscape, produced some valuable taxonomies, explored new paths by integrating technologies, and more importantly illuminated the problem and guided the research process towards a promising solution. Yet the primary contribution of this research is an approach that uses contemporary Grid technologies for integrating heterogeneous data resources that have semantically different. data fields (attributes). It has been practically demonstrated (using a prototype HealthGrid) that discovery in semantically integrated distributed data sources can be feasible by using mainstream Grid technologies, which have been shown to have some Significant advantages over non-Grid based approaches

A semantic approach for scalable and self-organized context-aware systems

Ph.DDOCTOR OF PHILOSOPH

Initiating organizational memories using ontology network analysis

One of the important problems in organizational memories is their initial set-up. It is difficult to choose the right information to include in an organizational memory, and the right information is also a prerequisite for maximizing the uptake and relevance of the memory content. To tackle this problem, most developers adopt heavy-weight solutions and rely on a faithful continuous interaction with users to create and improve its content. In this paper, we explore the use of an automatic, light-weight solution, drawn from the underlying ingredients of an organizational memory: ontologies. We have developed an ontology-based network analysis method which we applied to tackle the problem of identifying communities of practice in an organization. We use ontology-based network analysis as a means to provide content automatically for the initial set up of an organizational memory

An ontology for defining and characterizing demonstration environments

Demonstration Environments (DEs) are essential tools for testing and demonstrating new technologies, products, and services, and reducing uncertainties and risks in the innovation process. However, the terminology used to describe these environments is inconsistent, leading to heterogeneity in defining and characterizing them. This makes it difficult to establish a universal understanding of DEs and to differentiate between the different types of DEs, including testbeds, pilot-plants, and living labs. Moreover, existing literature lacks a holistic view of DEs, with studies focusing on specific types of DEs and not offering an integrated perspective on their characteristics and applicability in different contexts. This study proposes an ontology for knowledge representation related to DEs to address this gap. Using an ontology learning approach analyzing 3621 peer-reviewed journal articles, we develop a standardized framework for defining and characterizing DEs, providing a holistic view of these environments. The resulting ontology allows innovation managers and practitioners to select appropriate DEs for achieving their innovation goals, based on the characteristics and capabilities of the specific type of DE. The contributions of this study are significant in advancing the understanding and application of DEs in innovation processes. The proposed ontology provides a standardized approach for defining and characterizing DEs, reducing inconsistencies in terminology and establishing a common understanding of these environments. This enables innovation managers and practitioners to select appropriate DEs for their specific innovation goals, facilitating more efficient and effective innovation processes. Overall, this study provides a valuable resource for researchers, practitioners, and policymakers interested in the effective use of DEs in innovation

An ontology for defining and characterizing demonstration environments

Demonstration Environments (DEs) are essential tools for testing and demonstrating new technologies, products, and services, and reducing uncertainties and risks in the innovation process. However, the terminology used to describe these environments is inconsistent, leading to heterogeneity in defining and characterizing them. This makes it difficult to establish a universal understanding of DEs and to differentiate between the different types of DEs, including testbeds, pilot-plants, and living labs. Moreover, existing literature lacks a holistic view of DEs, with studies focusing on specific types of DEs and not offering an integrated perspective on their characteristics and applicability in different contexts. This study proposes an ontology for knowledge representation related to DEs to address this gap. Using an ontology learning approach analyzing 3621 peer-reviewed journal articles, we develop a standardized framework for defining and characterizing DEs, providing a holistic view of these environments. The resulting ontology allows innovation managers and practitioners to select appropriate DEs for achieving their innovation goals, based on the characteristics and capabilities of the specific type of DE. The contributions of this study are significant in advancing the understanding and application of DEs in innovation processes. The proposed ontology provides a standardized approach for defining and characterizing DEs, reducing inconsistencies in terminology and establishing a common understanding of these environments. This enables innovation managers and practitioners to select appropriate DEs for their specific innovation goals, facilitating more efficient and effective innovation processes. Overall, this study provides a valuable resource for researchers, practitioners, and policymakers interested in the effective use of DEs in innovation