192 research outputs found
The Discrete Infinite Logistic Normal Distribution
We present the discrete infinite logistic normal distribution (DILN), a
Bayesian nonparametric prior for mixed membership models. DILN is a
generalization of the hierarchical Dirichlet process (HDP) that models
correlation structure between the weights of the atoms at the group level. We
derive a representation of DILN as a normalized collection of gamma-distributed
random variables, and study its statistical properties. We consider
applications to topic modeling and derive a variational inference algorithm for
approximate posterior inference. We study the empirical performance of the DILN
topic model on four corpora, comparing performance with the HDP and the
correlated topic model (CTM). To deal with large-scale data sets, we also
develop an online inference algorithm for DILN and compare with online HDP and
online LDA on the Nature magazine, which contains approximately 350,000
articles.Comment: This paper will appear in Bayesian Analysis. A shorter version of
this paper appeared at AISTATS 2011, Fort Lauderdale, FL, US
Mixed membership stochastic blockmodels
Observations consisting of measurements on relationships for pairs of objects
arise in many settings, such as protein interaction and gene regulatory
networks, collections of author-recipient email, and social networks. Analyzing
such data with probabilisic models can be delicate because the simple
exchangeability assumptions underlying many boilerplate models no longer hold.
In this paper, we describe a latent variable model of such data called the
mixed membership stochastic blockmodel. This model extends blockmodels for
relational data to ones which capture mixed membership latent relational
structure, thus providing an object-specific low-dimensional representation. We
develop a general variational inference algorithm for fast approximate
posterior inference. We explore applications to social and protein interaction
networks.Comment: 46 pages, 14 figures, 3 table
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