9,220 research outputs found
Learned versus Hand-Designed Feature Representations for 3d Agglomeration
For image recognition and labeling tasks, recent results suggest that machine
learning methods that rely on manually specified feature representations may be
outperformed by methods that automatically derive feature representations based
on the data. Yet for problems that involve analysis of 3d objects, such as mesh
segmentation, shape retrieval, or neuron fragment agglomeration, there remains
a strong reliance on hand-designed feature descriptors. In this paper, we
evaluate a large set of hand-designed 3d feature descriptors alongside features
learned from the raw data using both end-to-end and unsupervised learning
techniques, in the context of agglomeration of 3d neuron fragments. By
combining unsupervised learning techniques with a novel dynamic pooling scheme,
we show how pure learning-based methods are for the first time competitive with
hand-designed 3d shape descriptors. We investigate data augmentation strategies
for dramatically increasing the size of the training set, and show how
combining both learned and hand-designed features leads to the highest
accuracy
Data-Driven Shape Analysis and Processing
Data-driven methods play an increasingly important role in discovering
geometric, structural, and semantic relationships between 3D shapes in
collections, and applying this analysis to support intelligent modeling,
editing, and visualization of geometric data. In contrast to traditional
approaches, a key feature of data-driven approaches is that they aggregate
information from a collection of shapes to improve the analysis and processing
of individual shapes. In addition, they are able to learn models that reason
about properties and relationships of shapes without relying on hard-coded
rules or explicitly programmed instructions. We provide an overview of the main
concepts and components of these techniques, and discuss their application to
shape classification, segmentation, matching, reconstruction, modeling and
exploration, as well as scene analysis and synthesis, through reviewing the
literature and relating the existing works with both qualitative and numerical
comparisons. We conclude our report with ideas that can inspire future research
in data-driven shape analysis and processing.Comment: 10 pages, 19 figure
Automated detection of brain abnormalities in neonatal hypoxia ischemic injury from MR images.
We compared the efficacy of three automated brain injury detection methods, namely symmetry-integrated region growing (SIRG), hierarchical region splitting (HRS) and modified watershed segmentation (MWS) in human and animal magnetic resonance imaging (MRI) datasets for the detection of hypoxic ischemic injuries (HIIs). Diffusion weighted imaging (DWI, 1.5T) data from neonatal arterial ischemic stroke (AIS) patients, as well as T2-weighted imaging (T2WI, 11.7T, 4.7T) at seven different time-points (1, 4, 7, 10, 17, 24 and 31 days post HII) in rat-pup model of hypoxic ischemic injury were used to assess the temporal efficacy of our computational approaches. Sensitivity, specificity, and similarity were used as performance metrics based on manual ('gold standard') injury detection to quantify comparisons. When compared to the manual gold standard, automated injury location results from SIRG performed the best in 62% of the data, while 29% for HRS and 9% for MWS. Injury severity detection revealed that SIRG performed the best in 67% cases while 33% for HRS. Prior information is required by HRS and MWS, but not by SIRG. However, SIRG is sensitive to parameter-tuning, while HRS and MWS are not. Among these methods, SIRG performs the best in detecting lesion volumes; HRS is the most robust, while MWS lags behind in both respects
Robust Temporally Coherent Laplacian Protrusion Segmentation of 3D Articulated Bodies
In motion analysis and understanding it is important to be able to fit a
suitable model or structure to the temporal series of observed data, in order
to describe motion patterns in a compact way, and to discriminate between them.
In an unsupervised context, i.e., no prior model of the moving object(s) is
available, such a structure has to be learned from the data in a bottom-up
fashion. In recent times, volumetric approaches in which the motion is captured
from a number of cameras and a voxel-set representation of the body is built
from the camera views, have gained ground due to attractive features such as
inherent view-invariance and robustness to occlusions. Automatic, unsupervised
segmentation of moving bodies along entire sequences, in a temporally-coherent
and robust way, has the potential to provide a means of constructing a
bottom-up model of the moving body, and track motion cues that may be later
exploited for motion classification. Spectral methods such as locally linear
embedding (LLE) can be useful in this context, as they preserve "protrusions",
i.e., high-curvature regions of the 3D volume, of articulated shapes, while
improving their separation in a lower dimensional space, making them in this
way easier to cluster. In this paper we therefore propose a spectral approach
to unsupervised and temporally-coherent body-protrusion segmentation along time
sequences. Volumetric shapes are clustered in an embedding space, clusters are
propagated in time to ensure coherence, and merged or split to accommodate
changes in the body's topology. Experiments on both synthetic and real
sequences of dense voxel-set data are shown. This supports the ability of the
proposed method to cluster body-parts consistently over time in a totally
unsupervised fashion, its robustness to sampling density and shape quality, and
its potential for bottom-up model constructionComment: 31 pages, 26 figure
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Statistical Region Based Segmentation of Ultrasound Images
Segmentation of ultrasound images is a challenging problem due to speckle, which
corrupts the image and can result in weak or missing image boundaries, poor signal to
noise ratio, and diminished contrast resolution. Speckle is a random interference pattern
that is characterized by an asymmetric distribution as well as significant spatial correla-
tion. These attributes of speckle are challenging to model in a segmentation approach, so
many previous ultrasound segmentation methods simplify the problem by assuming that
the speckle is white and/or Gaussian distributed. Unlike these methods, in this paper
we present an ultrasound-specific segmentation approach that addresses both the spatial
correlation of the data as well as its intensity distribution. We first decorrelate the image
and then apply a region-based active contour whose motion is derived from an appropri-
ate parametric distribution for maximum likelihood image segmentation. We consider
zero-mean complex Gaussian, Rayleigh, and Fisher-Tippett flows, which are designed
to model fully formed speckle in the in-phase/quadrature (IQ), envelope detected, and
display (log compressed) images, respectively. We present experimental results demon-
strating the effectiveness of our method, and compare the results to other parametric
and non-parametric active contours
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