Mumford-Shah Loss Functional for Image Segmentation with Deep Learning

Recent state-of-the-art image segmentation algorithms are mostly based on deep neural networks, thanks to their high performance and fast computation time. However, these methods are usually trained in a supervised manner, which requires large number of high quality ground-truth segmentation masks. On the other hand, classical image segmentation approaches such as level-set methods are formulated in a self-supervised manner by minimizing energy functions such as Mumford-Shah functional, so they are still useful to help generation of segmentation masks without labels. Unfortunately, these algorithms are usually computationally expensive and often have limitation in semantic segmentation. In this paper, we propose a novel loss function based on Mumford-Shah functional that can be used in deep-learning based image segmentation without or with small labeled data. This loss function is based on the observation that the softmax layer of deep neural networks has striking similarity to the characteristic function in the Mumford-Shah functional. We show that the new loss function enables semi-supervised and unsupervised segmentation. In addition, our loss function can be also used as a regularized function to enhance supervised semantic segmentation algorithms. Experimental results on multiple datasets demonstrate the effectiveness of the proposed method.Comment: Accepted for IEEE Transactions on Image Processin

Unsupervised learning from video to detect foreground objects in single images

Unsupervised learning from visual data is one of the most difficult challenges in computer vision, being a fundamental task for understanding how visual recognition works. From a practical point of view, learning from unsupervised visual input has an immense practical value, as very large quantities of unlabeled videos can be collected at low cost. In this paper, we address the task of unsupervised learning to detect and segment foreground objects in single images. We achieve our goal by training a student pathway, consisting of a deep neural network. It learns to predict from a single input image (a video frame) the output for that particular frame, of a teacher pathway that performs unsupervised object discovery in video. Our approach is different from the published literature that performs unsupervised discovery in videos or in collections of images at test time. We move the unsupervised discovery phase during the training stage, while at test time we apply the standard feed-forward processing along the student pathway. This has a dual benefit: firstly, it allows in principle unlimited possibilities of learning and generalization during training, while remaining very fast at testing. Secondly, the student not only becomes able to detect in single images significantly better than its unsupervised video discovery teacher, but it also achieves state of the art results on two important current benchmarks, YouTube Objects and Object Discovery datasets. Moreover, at test time, our system is at least two orders of magnitude faster than other previous methods

Self-supervised Visual Feature Learning with Deep Neural Networks: A Survey

Large-scale labeled data are generally required to train deep neural networks in order to obtain better performance in visual feature learning from images or videos for computer vision applications. To avoid extensive cost of collecting and annotating large-scale datasets, as a subset of unsupervised learning methods, self-supervised learning methods are proposed to learn general image and video features from large-scale unlabeled data without using any human-annotated labels. This paper provides an extensive review of deep learning-based self-supervised general visual feature learning methods from images or videos. First, the motivation, general pipeline, and terminologies of this field are described. Then the common deep neural network architectures that used for self-supervised learning are summarized. Next, the main components and evaluation metrics of self-supervised learning methods are reviewed followed by the commonly used image and video datasets and the existing self-supervised visual feature learning methods. Finally, quantitative performance comparisons of the reviewed methods on benchmark datasets are summarized and discussed for both image and video feature learning. At last, this paper is concluded and lists a set of promising future directions for self-supervised visual feature learning

Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images

Histopathology images are crucial to the study of complex diseases such as cancer. The histologic characteristics of nuclei play a key role in disease diagnosis, prognosis and analysis. In this work, we propose a sparse Convolutional Autoencoder (CAE) for fully unsupervised, simultaneous nucleus detection and feature extraction in histopathology tissue images. Our CAE detects and encodes nuclei in image patches in tissue images into sparse feature maps that encode both the location and appearance of nuclei. Our CAE is the first unsupervised detection network for computer vision applications. The pretrained nucleus detection and feature extraction modules in our CAE can be fine-tuned for supervised learning in an end-to-end fashion. We evaluate our method on four datasets and reduce the errors of state-of-the-art methods up to 42%. We are able to achieve comparable performance with only 5% of the fully-supervised annotation cost

Machine learning methods for histopathological image analysis

Abundant accumulation of digital histopathological images has led to the increased demand for their analysis, such as computer-aided diagnosis using machine learning techniques. However, digital pathological images and related tasks have some issues to be considered. In this mini-review, we introduce the application of digital pathological image analysis using machine learning algorithms, address some problems specific to such analysis, and propose possible solutions.Comment: 23 pages, 4 figure

SqueezeSegV2: Improved Model Structure and Unsupervised Domain Adaptation for Road-Object Segmentation from a LiDAR Point Cloud

Earlier work demonstrates the promise of deep-learning-based approaches for point cloud segmentation; however, these approaches need to be improved to be practically useful. To this end, we introduce a new model SqueezeSegV2 that is more robust to dropout noise in LiDAR point clouds. With improved model structure, training loss, batch normalization and additional input channel, SqueezeSegV2 achieves significant accuracy improvement when trained on real data. Training models for point cloud segmentation requires large amounts of labeled point-cloud data, which is expensive to obtain. To sidestep the cost of collection and annotation, simulators such as GTA-V can be used to create unlimited amounts of labeled, synthetic data. However, due to domain shift, models trained on synthetic data often do not generalize well to the real world. We address this problem with a domain-adaptation training pipeline consisting of three major components: 1) learned intensity rendering, 2) geodesic correlation alignment, and 3) progressive domain calibration. When trained on real data, our new model exhibits segmentation accuracy improvements of 6.0-8.6% over the original SqueezeSeg. When training our new model on synthetic data using the proposed domain adaptation pipeline, we nearly double test accuracy on real-world data, from 29.0% to 57.4%. Our source code and synthetic dataset will be open-sourced.Comment: Bichen Wu, Xuanyu Zhou, and Sicheng Zhao contributed equally to this pape

An Efficient Evolutionary Based Method For Image Segmentation

The goal of this paper is to present a new efficient image segmentation method based on evolutionary computation which is a model inspired from human behavior. Based on this model, a four layer process for image segmentation is proposed using the split/merge approach. In the first layer, an image is split into numerous regions using the watershed algorithm. In the second layer, a co-evolutionary process is applied to form centers of finals segments by merging similar primary regions. In the third layer, a meta-heuristic process uses two operators to connect the residual regions to their corresponding determined centers. In the final layer, an evolutionary algorithm is used to combine the resulted similar and neighbor regions. Different layers of the algorithm are totally independent, therefore for certain applications a specific layer can be changed without constraint of changing other layers. Some properties of this algorithm like the flexibility of its method, the ability to use different feature vectors for segmentation (grayscale, color, texture, etc), the ability to control uniformity and the number of final segments using free parameters and also maintaining small regions, makes it possible to apply the algorithm to different applications. Moreover, the independence of each region from other regions in the second layer, and the independence of centers in the third layer, makes parallel implementation possible. As a result the algorithm speed will increase. The presented algorithm was tested on a standard dataset (BSDS 300) of images, and the region boundaries were compared with different people segmentation contours. Results show the efficiency of the algorithm and its improvement to similar methods. As an instance, in 70% of tested images, results are better than ACT algorithm, besides in 100% of tested images, we had better results in comparison with VSP algorithm.Comment: 17 page

Unsupervised End-to-end Learning for Deformable Medical Image Registration

We propose a registration algorithm for 2D CT/MRI medical images with a new unsupervised end-to-end strategy using convolutional neural networks. The contributions of our algorithm are threefold: (1) We transplant traditional image registration algorithms to an end-to-end convolutional neural network framework, while maintaining the unsupervised nature of image registration problems. The image-to-image integrated framework can simultaneously learn both image features and transformation matrix for registration. (2) Training with additional data without any label can further improve the registration performance by approximately 10 %. (3) The registration speed is 100x faster than traditional methods. The proposed network is easy to implement and can be trained efficiently. Experiments demonstrate that our system achieves state-of-the-art results on 2D brain registration and achieves comparable results on 2D liver registration. It can be extended to register other organs beyond liver and brain such as kidney, lung, and heart

Universal Semi-Supervised Semantic Segmentation

In recent years, the need for semantic segmentation has arisen across several different applications and environments. However, the expense and redundancy of annotation often limits the quantity of labels available for training in any domain, while deployment is easier if a single model works well across domains. In this paper, we pose the novel problem of universal semi-supervised semantic segmentation and propose a solution framework, to meet the dual needs of lower annotation and deployment costs. In contrast to counterpoints such as fine tuning, joint training or unsupervised domain adaptation, universal semi-supervised segmentation ensures that across all domains: (i) a single model is deployed, (ii) unlabeled data is used, (iii) performance is improved, (iv) only a few labels are needed and (v) label spaces may differ. To address this, we minimize supervised as well as within and cross-domain unsupervised losses, introducing a novel feature alignment objective based on pixel-aware entropy regularization for the latter. We demonstrate quantitative advantages over other approaches on several combinations of segmentation datasets across different geographies (Germany, England, India) and environments (outdoors, indoors), as well as qualitative insights on the aligned representations.Comment: Accepted as poster presentation at ICCV 201

Exploring Object Relation in Mean Teacher for Cross-Domain Detection

Rendering synthetic data (e.g., 3D CAD-rendered images) to generate annotations for learning deep models in vision tasks has attracted increasing attention in recent years. However, simply applying the models learnt on synthetic images may lead to high generalization error on real images due to domain shift. To address this issue, recent progress in cross-domain recognition has featured the Mean Teacher, which directly simulates unsupervised domain adaptation as semi-supervised learning. The domain gap is thus naturally bridged with consistency regularization in a teacher-student scheme. In this work, we advance this Mean Teacher paradigm to be applicable for cross-domain detection. Specifically, we present Mean Teacher with Object Relations (MTOR) that novelly remolds Mean Teacher under the backbone of Faster R-CNN by integrating the object relations into the measure of consistency cost between teacher and student modules. Technically, MTOR firstly learns relational graphs that capture similarities between pairs of regions for teacher and student respectively. The whole architecture is then optimized with three consistency regularizations: 1) region-level consistency to align the region-level predictions between teacher and student, 2) inter-graph consistency for matching the graph structures between teacher and student, and 3) intra-graph consistency to enhance the similarity between regions of same class within the graph of student. Extensive experiments are conducted on the transfers across Cityscapes, Foggy Cityscapes, and SIM10k, and superior results are reported when comparing to state-of-the-art approaches. More remarkably, we obtain a new record of single model: 22.8% of mAP on Syn2Real detection dataset.Comment: CVPR 2019; The codes and model of our MTOR are publicly available at: https://github.com/caiqi/mean-teacher-cross-domain-detectio