A knowledge graph embeddings based approach for author name disambiguation using literals

Scholarly data is growing continuously containing information about the articles from a plethora of venues including conferences, journals, etc. Many initiatives have been taken to make scholarly data available in the form of Knowledge Graphs (KGs). These efforts to standardize these data and make them accessible have also led to many challenges such as exploration of scholarly articles, ambiguous authors, etc. This study more specifically targets the problem of Author Name Disambiguation (AND) on Scholarly KGs and presents a novel framework, Literally Author Name Disambiguation (LAND), which utilizes Knowledge Graph Embeddings (KGEs) using multimodal literal information generated from these KGs. This framework is based on three components: (1) multimodal KGEs, (2) a blocking procedure, and finally, (3) hierarchical Agglomerative Clustering. Extensive experiments have been conducted on two newly created KGs: (i) KG containing information from Scientometrics Journal from 1978 onwards (OC-782K), and (ii) a KG extracted from a well-known benchmark for AND provided by AMiner (AMiner-534K). The results show that our proposed architecture outperforms our baselines of 8–14% in terms of F1 score and shows competitive performances on a challenging benchmark such as AMiner. The code and the datasets are publicly available through Github (https://github.com/sntcristian/and-kge) and Zenodo (https://doi.org/10.5281/zenodo.6309855) respectively

A knowledge graph embeddings based approach for author name disambiguation using literals

Scholarly data is growing continuously containing information about the articles from a plethora of venues including conferences, journals, etc. Many initiatives have been taken to make scholarly data available in the form of Knowledge Graphs (KGs). These efforts to standardize these data and make them accessible have also led to many challenges such as exploration of scholarly articles, ambiguous authors, etc. This study more specifically targets the problem of Author Name Disambiguation (AND) on Scholarly KGs and presents a novel framework, Literally Author Name Disambiguation (LAND), which utilizes Knowledge Graph Embeddings (KGEs) using multimodal literal information generated from these KGs. This framework is based on three components: (1) multimodal KGEs, (2) a blocking procedure, and finally, (3) hierarchical Agglomerative Clustering. Extensive experiments have been conducted on two newly created KGs: (i) KG containing information from Scientometrics Journal from 1978 onwards (OC-782K), and (ii) a KG extracted from a well-known benchmark for AND provided by AMiner (AMiner-534K). The results show that our proposed architecture outperforms our baselines of 8–14% in terms of F1 score and shows competitive performances on a challenging benchmark such as AMiner. The code and the datasets are publicly available through Github (https://github.com/sntcristian/and-kge) and Zenodo (https://doi.org/10.5281/zenodo.6309855) respectively

A knowledge graph embeddings based approach for author name disambiguation using literals

Scholarly data is growing continuously containing information about the articles from a plethora of venues including conferences, journals, etc. Many initiatives have been taken to make scholarly data available in the form of Knowledge Graphs (KGs). These efforts to standardize these data and make them accessible have also led to many challenges such as exploration of scholarly articles, ambiguous authors, etc. This study more specifically targets the problem of Author Name Disambiguation (AND) on Scholarly KGs and presents a novel framework, Literally Author Name Disambiguation (LAND), which utilizes Knowledge Graph Embeddings (KGEs) using multimodal literal information generated from these KGs. This framework is based on three components: (1) multimodal KGEs, (2) a blocking procedure, and finally, (3) hierarchical Agglomerative Clustering. Extensive experiments have been conducted on two newly created KGs: (i) KG containing information from Scientometrics Journal from 1978 onwards (OC-782K), and (ii) a KG extracted from a well-known benchmark for AND provided by AMiner (AMiner-534K). The results show that our proposed architecture outperforms our baselines of 8–14% in terms of F1 score and shows competitive performances on a challenging benchmark such as AMiner. The code and the datasets are publicly available through Github (https://github.com/sntcristian/and-kge) and Zenodo (https://doi.org/10.5281/zenodo.6309855) respectively

Author Name Disambiguation via Heterogeneous Network Embedding from Structural and Semantic Perspectives

Name ambiguity is common in academic digital libraries, such as multiple authors having the same name. This creates challenges for academic data management and analysis, thus name disambiguation becomes necessary. The procedure of name disambiguation is to divide publications with the same name into different groups, each group belonging to a unique author. A large amount of attribute information in publications makes traditional methods fall into the quagmire of feature selection. These methods always select attributes artificially and equally, which usually causes a negative impact on accuracy. The proposed method is mainly based on representation learning for heterogeneous networks and clustering and exploits the self-attention technology to solve the problem. The presentation of publications is a synthesis of structural and semantic representations. The structural representation is obtained by meta-path-based sampling and a skip-gram-based embedding method, and meta-path level attention is introduced to automatically learn the weight of each feature. The semantic representation is generated using NLP tools. Our proposal performs better in terms of name disambiguation accuracy compared with baselines and the ablation experiments demonstrate the improvement by feature selection and the meta-path level attention in our method. The experimental results show the superiority of our new method for capturing the most attributes from publications and reducing the impact of redundant information

Easing Embedding Learning by Comprehensive Transcription of Heterogeneous Information Networks

Heterogeneous information networks (HINs) are ubiquitous in real-world applications. In the meantime, network embedding has emerged as a convenient tool to mine and learn from networked data. As a result, it is of interest to develop HIN embedding methods. However, the heterogeneity in HINs introduces not only rich information but also potentially incompatible semantics, which poses special challenges to embedding learning in HINs. With the intention to preserve the rich yet potentially incompatible information in HIN embedding, we propose to study the problem of comprehensive transcription of heterogeneous information networks. The comprehensive transcription of HINs also provides an easy-to-use approach to unleash the power of HINs, since it requires no additional supervision, expertise, or feature engineering. To cope with the challenges in the comprehensive transcription of HINs, we propose the HEER algorithm, which embeds HINs via edge representations that are further coupled with properly-learned heterogeneous metrics. To corroborate the efficacy of HEER, we conducted experiments on two large-scale real-words datasets with an edge reconstruction task and multiple case studies. Experiment results demonstrate the effectiveness of the proposed HEER model and the utility of edge representations and heterogeneous metrics. The code and data are available at https://github.com/GentleZhu/HEER.Comment: 10 pages. In Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, London, United Kingdom, ACM, 201

COAD: Contrastive Pre-training with Adversarial Fine-tuning for Zero-shot Expert Linking

Expert finding, a popular service provided by many online websites such as Expertise Finder, LinkedIn, and AMiner, benefits seeking consultants, collaborators, and candidate qualifications. However, its quality is suffered from a single source of support information for experts. This paper employs AMiner, a free online academic search and mining system, having collected more than over 100 million researcher profiles together with 200 million papers from multiple publication databases, as the basis for investigating the problem of expert linking, which aims at linking any external information of persons to experts in AMiner. A critical challenge is how to perform zero shot expert linking without any labeled linkages from the external information to AMiner experts, as it is infeasible to acquire sufficient labels for arbitrary external sources. Inspired by the success of self supervised learning in computer vision and natural language processing, we propose to train a self supervised expert linking model, which is first pretrained by contrastive learning on AMiner data to capture the common representation and matching patterns of experts across AMiner and external sources, and is then fine-tuned by adversarial learning on AMiner and the unlabeled external sources to improve the model transferability. Experimental results demonstrate that COAD significantly outperforms various baselines without contrastive learning of experts on two widely studied downstream tasks: author identification (improving up to 32.1% in HitRatio@1) and paper clustering (improving up to 14.8% in Pairwise-F1). Expert linking on two genres of external sources also indicates the superiority of the proposed adversarial fine-tuning method compared with other domain adaptation ways (improving up to 2.3% in HitRatio@1).Comment: TKDE under revie

Knowledge-based Biomedical Data Science 2019

Knowledge-based biomedical data science (KBDS) involves the design and implementation of computer systems that act as if they knew about biomedicine. Such systems depend on formally represented knowledge in computer systems, often in the form of knowledge graphs. Here we survey the progress in the last year in systems that use formally represented knowledge to address data science problems in both clinical and biological domains, as well as on approaches for creating knowledge graphs. Major themes include the relationships between knowledge graphs and machine learning, the use of natural language processing, and the expansion of knowledge-based approaches to novel domains, such as Chinese Traditional Medicine and biodiversity.Comment: Manuscript 43 pages with 3 tables; Supplemental material 43 pages with 3 table

DEAP-FAKED: Knowledge Graph based Approach for Fake News Detection

Fake News on social media platforms has attracted a lot of attention in recent times, primarily for events related to politics (2016 US Presidential elections), healthcare (infodemic during COVID-19), to name a few. Various methods have been proposed for detecting Fake News. The approaches span from exploiting techniques related to network analysis, Natural Language Processing (NLP), and the usage of Graph Neural Networks (GNNs). In this work, we propose DEAP-FAKED, a knowleDgE grAPh FAKe nEws Detection framework for identifying Fake News. Our approach is a combination of the NLP -- where we encode the news content, and the GNN technique -- where we encode the Knowledge Graph (KG). A variety of these encodings provides a complementary advantage to our detector. We evaluate our framework using two publicly available datasets containing articles from domains such as politics, business, technology, and healthcare. As part of dataset pre-processing, we also remove the bias, such as the source of the articles, which could impact the performance of the models. DEAP-FAKED obtains an F1-score of 88% and 78% for the two datasets, which is an improvement of 21%, and 3% respectively, which shows the effectiveness of the approach.Comment: Accepted at IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM) 202

A Comprehensive Survey on Deep Graph Representation Learning

Graph representation learning aims to effectively encode high-dimensional sparse graph-structured data into low-dimensional dense vectors, which is a fundamental task that has been widely studied in a range of fields, including machine learning and data mining. Classic graph embedding methods follow the basic idea that the embedding vectors of interconnected nodes in the graph can still maintain a relatively close distance, thereby preserving the structural information between the nodes in the graph. However, this is sub-optimal due to: (i) traditional methods have limited model capacity which limits the learning performance; (ii) existing techniques typically rely on unsupervised learning strategies and fail to couple with the latest learning paradigms; (iii) representation learning and downstream tasks are dependent on each other which should be jointly enhanced. With the remarkable success of deep learning, deep graph representation learning has shown great potential and advantages over shallow (traditional) methods, there exist a large number of deep graph representation learning techniques have been proposed in the past decade, especially graph neural networks. In this survey, we conduct a comprehensive survey on current deep graph representation learning algorithms by proposing a new taxonomy of existing state-of-the-art literature. Specifically, we systematically summarize the essential components of graph representation learning and categorize existing approaches by the ways of graph neural network architectures and the most recent advanced learning paradigms. Moreover, this survey also provides the practical and promising applications of deep graph representation learning. Last but not least, we state new perspectives and suggest challenging directions which deserve further investigations in the future