1,677 research outputs found
Regularized Newton Methods for X-ray Phase Contrast and General Imaging Problems
Like many other advanced imaging methods, x-ray phase contrast imaging and
tomography require mathematical inversion of the observed data to obtain
real-space information. While an accurate forward model describing the
generally nonlinear image formation from a given object to the observations is
often available, explicit inversion formulas are typically not known. Moreover,
the measured data might be insufficient for stable image reconstruction, in
which case it has to be complemented by suitable a priori information. In this
work, regularized Newton methods are presented as a general framework for the
solution of such ill-posed nonlinear imaging problems. For a proof of
principle, the approach is applied to x-ray phase contrast imaging in the
near-field propagation regime. Simultaneous recovery of the phase- and
amplitude from a single near-field diffraction pattern without homogeneity
constraints is demonstrated for the first time. The presented methods further
permit all-at-once phase contrast tomography, i.e. simultaneous phase retrieval
and tomographic inversion. We demonstrate the potential of this approach by
three-dimensional imaging of a colloidal crystal at 95 nm isotropic resolution.Comment: (C)2016 Optical Society of America. One print or electronic copy may
be made for personal use only. Systematic reproduction and distribution,
duplication of any material in this paper for a fee or for commercial
purposes, or modifications of the content of this paper are prohibite
On Some Geometric Aspects of the Class of hv-Convex Switching Components
In the usual aim of discrete tomography, the reconstruction of an unknown discrete set is considered, by means of projection data collected along a set U of discrete directions. Possible ambiguous reconstructions can arise if and only if switching components occur, namely, if and only if non-empty images exist having null projections along all the directions in U. In order to lower the number of allowed reconstructions, one tries to incorporate possible extra geometric constraints in the tomographic problem. In particular, the class P of horizontally and vertically convex connected sets (briefly, hv-convex polyominoes) has been largely considered. In this paper we introduce the class of hv-convex switching components, and prove some preliminary results on their geometric structure. The class includes all switching components arising when the tomographic problem is considered in P, which highly motivates the investigation of such configurations. It turns out that the considered class can be partitioned in two disjointed subclasses of closed patterns, called windows and curls, respectively. It follows that all windows have a unique representation, while curls consist of interlaced sequences of sub-patterns, called Z-paths, which leads to the problem of understanding the combinatorial structure of such sequences. We provide explicit constructions of families of curls associated to some special sequences, and also give additional details on further allowed or forbidden configurations by means of a number of illustrative examples
Accelerated High-Resolution Photoacoustic Tomography via Compressed Sensing
Current 3D photoacoustic tomography (PAT) systems offer either high image
quality or high frame rates but are not able to deliver high spatial and
temporal resolution simultaneously, which limits their ability to image dynamic
processes in living tissue. A particular example is the planar Fabry-Perot (FP)
scanner, which yields high-resolution images but takes several minutes to
sequentially map the photoacoustic field on the sensor plane, point-by-point.
However, as the spatio-temporal complexity of many absorbing tissue structures
is rather low, the data recorded in such a conventional, regularly sampled
fashion is often highly redundant. We demonstrate that combining variational
image reconstruction methods using spatial sparsity constraints with the
development of novel PAT acquisition systems capable of sub-sampling the
acoustic wave field can dramatically increase the acquisition speed while
maintaining a good spatial resolution: First, we describe and model two general
spatial sub-sampling schemes. Then, we discuss how to implement them using the
FP scanner and demonstrate the potential of these novel compressed sensing PAT
devices through simulated data from a realistic numerical phantom and through
measured data from a dynamic experimental phantom as well as from in-vivo
experiments. Our results show that images with good spatial resolution and
contrast can be obtained from highly sub-sampled PAT data if variational image
reconstruction methods that describe the tissues structures with suitable
sparsity-constraints are used. In particular, we examine the use of total
variation regularization enhanced by Bregman iterations. These novel
reconstruction strategies offer new opportunities to dramatically increase the
acquisition speed of PAT scanners that employ point-by-point sequential
scanning as well as reducing the channel count of parallelized schemes that use
detector arrays.Comment: submitted to "Physics in Medicine and Biology
TomoPIV meets Compressed Sensing
We study the discrete tomography problem in Experimental Fluid Dynamics - Tomographic Particle Image Velocimetry (TomoPIV) - from the viewpoint of compressed sensing (CS). The CS theory of recoverability and stability of sparse solutions to underdetermined linear inverse problems has rapidly evolved during the last years. We show that all currently available CS concepts predict an extremely poor worst case performance, and a low expected performance of the TomoPIV measurement system, indicating why low particle densities only are currently used by engineers in practice. Simulations demonstrate however that slight random perturbations of the TomoPIV measurement matrix considerably boost both worst-case and expected reconstruction performance. This finding is interesting for CS theory and for the design of TomoPIV measurement systems in practice
Phase Retrieval with Application to Optical Imaging
This review article provides a contemporary overview of phase retrieval in
optical imaging, linking the relevant optical physics to the information
processing methods and algorithms. Its purpose is to describe the current state
of the art in this area, identify challenges, and suggest vision and areas
where signal processing methods can have a large impact on optical imaging and
on the world of imaging at large, with applications in a variety of fields
ranging from biology and chemistry to physics and engineering
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