Survey over Existing Query and Transformation Languages

A widely acknowledged obstacle for realizing the vision of the Semantic Web is the inability of many current Semantic Web approaches to cope with data available in such diverging representation formalisms as XML, RDF, or Topic Maps. A common query language is the first step to allow transparent access to data in any of these formats. To further the understanding of the requirements and approaches proposed for query languages in the conventional as well as the Semantic Web, this report surveys a large number of query languages for accessing XML, RDF, or Topic Maps. This is the first systematic survey to consider query languages from all these areas. From the detailed survey of these query languages, a common classification scheme is derived that is useful for understanding and differentiating languages within and among all three areas

Data Model and Query Constructs for Versatile Web Query Languages

As the Semantic Web is gaining momentum, the need for truly versatile query languages becomes increasingly apparent. A Web query language is called versatile if it can access in the same query program data in different formats (e.g. XML and RDF). Most query languages are not versatile: they have not been specifically designed to cope with both worlds, providing a uniform language and common constructs to query and transform data in various formats. Moreover, most of them do not provide a flexible data model that is powerful enough to naturally convey both Semantic Web data formats (especially RDF and Topic Maps) and XML. This article highlights challenges related to the data model and language constructs for querying both standard Web and Semantic Web data with an emphasis on facilitating sophisticated reasoning. It is shown that Xcerpt’s data model and querying constructs are particularly well-suited for the Semantic Web, but that some adjustments of the Xcerpt syntax allow for even more effective and natural querying of RDF and Topic Maps

Structural Regularities in Text-based Entity Vector Spaces

Entity retrieval is the task of finding entities such as people or products in response to a query, based solely on the textual documents they are associated with. Recent semantic entity retrieval algorithms represent queries and experts in finite-dimensional vector spaces, where both are constructed from text sequences. We investigate entity vector spaces and the degree to which they capture structural regularities. Such vector spaces are constructed in an unsupervised manner without explicit information about structural aspects. For concreteness, we address these questions for a specific type of entity: experts in the context of expert finding. We discover how clusterings of experts correspond to committees in organizations, the ability of expert representations to encode the co-author graph, and the degree to which they encode academic rank. We compare latent, continuous representations created using methods based on distributional semantics (LSI), topic models (LDA) and neural networks (word2vec, doc2vec, SERT). Vector spaces created using neural methods, such as doc2vec and SERT, systematically perform better at clustering than LSI, LDA and word2vec. When it comes to encoding entity relations, SERT performs best.Comment: ICTIR2017. Proceedings of the 3rd ACM International Conference on the Theory of Information Retrieval. 201

Annotations for Rule-Based Models

The chapter reviews the syntax to store machine-readable annotations and describes the mapping between rule-based modelling entities (e.g., agents and rules) and these annotations. In particular, we review an annotation framework and the associated guidelines for annotating rule-based models of molecular interactions, encoded in the commonly used Kappa and BioNetGen languages, and present prototypes that can be used to extract and query the annotations. An ontology is used to annotate models and facilitate their description

Reasoning & Querying – State of the Art

Various query languages for Web and Semantic Web data, both for practical use and as an area of research in the scientific community, have emerged in recent years. At the same time, the broad adoption of the internet where keyword search is used in many applications, e.g. search engines, has familiarized casual users with using keyword queries to retrieve information on the internet. Unlike this easy-to-use querying, traditional query languages require knowledge of the language itself as well as of the data to be queried. Keyword-based query languages for XML and RDF bridge the gap between the two, aiming at enabling simple querying of semi-structured data, which is relevant e.g. in the context of the emerging Semantic Web. This article presents an overview of the field of keyword querying for XML and RDF

BlogForever D2.6: Data Extraction Methodology

This report outlines an inquiry into the area of web data extraction, conducted within the context of blog preservation. The report reviews theoretical advances and practical developments for implementing data extraction. The inquiry is extended through an experiment that demonstrates the effectiveness and feasibility of implementing some of the suggested approaches. More specifically, the report discusses an approach based on unsupervised machine learning that employs the RSS feeds and HTML representations of blogs. It outlines the possibilities of extracting semantics available in blogs and demonstrates the benefits of exploiting available standards such as microformats and microdata. The report proceeds to propose a methodology for extracting and processing blog data to further inform the design and development of the BlogForever platform