Discovering Job Preemptions in the Open Science Grid

The Open Science Grid(OSG) is a world-wide computing system which facilitates distributed computing for scientific research. It can distribute a computationally intensive job to geo-distributed clusters and process job's tasks in parallel. For compute clusters on the OSG, physical resources may be shared between OSG and cluster's local user-submitted jobs, with local jobs preempting OSG-based ones. As a result, job preemptions occur frequently in OSG, sometimes significantly delaying job completion time. We have collected job data from OSG over a period of more than 80 days. We present an analysis of the data, characterizing the preemption patterns and different types of jobs. Based on observations, we have grouped OSG jobs into 5 categories and analyze the runtime statistics for each category. we further choose different statistical distributions to estimate probability density function of job runtime for different classes.Comment: 8 page

Parameterized complexity of machine scheduling: 15 open problems

Machine scheduling problems are a long-time key domain of algorithms and complexity research. A novel approach to machine scheduling problems are fixed-parameter algorithms. To stimulate this thriving research direction, we propose 15 open questions in this area whose resolution we expect to lead to the discovery of new approaches and techniques both in scheduling and parameterized complexity theory.Comment: Version accepted to Computers & Operations Researc

S-Store: Streaming Meets Transaction Processing

Stream processing addresses the needs of real-time applications. Transaction processing addresses the coordination and safety of short atomic computations. Heretofore, these two modes of operation existed in separate, stove-piped systems. In this work, we attempt to fuse the two computational paradigms in a single system called S-Store. In this way, S-Store can simultaneously accommodate OLTP and streaming applications. We present a simple transaction model for streams that integrates seamlessly with a traditional OLTP system. We chose to build S-Store as an extension of H-Store, an open-source, in-memory, distributed OLTP database system. By implementing S-Store in this way, we can make use of the transaction processing facilities that H-Store already supports, and we can concentrate on the additional implementation features that are needed to support streaming. Similar implementations could be done using other main-memory OLTP platforms. We show that we can actually achieve higher throughput for streaming workloads in S-Store than an equivalent deployment in H-Store alone. We also show how this can be achieved within H-Store with the addition of a modest amount of new functionality. Furthermore, we compare S-Store to two state-of-the-art streaming systems, Spark Streaming and Storm, and show how S-Store matches and sometimes exceeds their performance while providing stronger transactional guarantees

A Survey on the Evolution of Stream Processing Systems

Stream processing has been an active research field for more than 20 years, but it is now witnessing its prime time due to recent successful efforts by the research community and numerous worldwide open-source communities. This survey provides a comprehensive overview of fundamental aspects of stream processing systems and their evolution in the functional areas of out-of-order data management, state management, fault tolerance, high availability, load management, elasticity, and reconfiguration. We review noteworthy past research findings, outline the similarities and differences between early ('00-'10) and modern ('11-'18) streaming systems, and discuss recent trends and open problems.Comment: 34 pages, 15 figures, 5 table

Real time stream processing for Internet of things and sensing environments

Includes bibliographical references.2015 Fall.Improvements in miniaturization and networking capabilities of sensors have contributed to the proliferation of Internet of Things (IoT) and continuous sensing environments. Data streams generated in such settings must keep pace with generation rates and be processed in real time. Challenges in accomplishing this include: high data arrival rates, buffer overflows, context-switches during processing, and object creation overheads. We propose a holistic framework that addresses the CPU, memory, network, and kernel issues involved in stream processing. Our prototype, Neptune, builds on the Granules cloud runtime and leverages its support for scheduling packets and communications based on publish/subscribe, peer to peer, and point-to-point. The framework maximizes bandwidth utilization in the presence of small messages via the use of buffering and dynamic compactions of packets based on their entropy. Our use of thread-pools and batched processing reduces context switches and improves effective CPU utilizations. The framework alleviates memory pressure that can lead to swapping, page faults, and thrashing through efficient reuse of objects. To cope with buffer overflows we rely on flow control and throttling the preceding stages of a processing pipeline. Our correctness criteria included deadlock/livelock avoidance, and ordered and exactly-once processing. Our benchmarks demonstrate the suitability of the Granules/Neptune combination and we contrast our performance with Apache Storm, the dominant stream-processing framework developed by Twitter. At a single node, we are able to achieve a processing rate of ~2 million stream packets per-second. In a distributed cluster setup, we are able to achieve a processing rate of ~100 million stream packets per-second with a near-optimal bandwidth utilization

PiCo: A Domain-Specific Language for Data Analytics Pipelines

In the world of Big Data analytics, there is a series of tools aiming at simplifying programming applications to be executed on clusters. Although each tool claims to provide better programming, data and execution models—for which only informal (and often confusing) semantics is generally provided—all share a common under- lying model, namely, the Dataflow model. Using this model as a starting point, it is possible to categorize and analyze almost all aspects about Big Data analytics tools from a high level perspective. This analysis can be considered as a first step toward a formal model to be exploited in the design of a (new) framework for Big Data analytics. By putting clear separations between all levels of abstraction (i.e., from the runtime to the user API), it is easier for a programmer or software designer to avoid mixing low level with high level aspects, as we are often used to see in state-of-the-art Big Data analytics frameworks. From the user-level perspective, we think that a clearer and simple semantics is preferable, together with a strong separation of concerns. For this reason, we use the Dataflow model as a starting point to build a programming environment with a simplified programming model implemented as a Domain-Specific Language, that is on top of a stack of layers that build a prototypical framework for Big Data analytics. The contribution of this thesis is twofold: first, we show that the proposed model is (at least) as general as existing batch and streaming frameworks (e.g., Spark, Flink, Storm, Google Dataflow), thus making it easier to understand high-level data-processing applications written in such frameworks. As result of this analysis, we provide a layered model that can represent tools and applications following the Dataflow paradigm and we show how the analyzed tools fit in each level. Second, we propose a programming environment based on such layered model in the form of a Domain-Specific Language (DSL) for processing data collections, called PiCo (Pipeline Composition). The main entity of this programming model is the Pipeline, basically a DAG-composition of processing elements. This model is intended to give the user an unique interface for both stream and batch processing, hiding completely data management and focusing only on operations, which are represented by Pipeline stages. Our DSL will be built on top of the FastFlow library, exploiting both shared and distributed parallelism, and implemented in C++11/14 with the aim of porting C++ into the Big Data world

Tachyon: Reliable, Memory Speed Storage for Cluster Computing Frameworks

Tachyon is a distributed file system enabling reliable data sharing at memory speed across cluster computing frameworks. While caching today improves read workloads, writes are either network or disk bound, as replication is used for fault-tolerance. Tachyon eliminates this bottleneck by pushing lineage, a well-known technique, into the storage layer. The key challenge in making a long-running lineage-based storage system is timely data recovery in case of failures. Tachyon addresses this issue by introducing a checkpointing algorithm that guarantees bounded recovery cost and resource allocation strategies for recomputation under commonly used resource schedulers. Our evaluation shows that Tachyon outperforms in-memory HDFS by 110x for writes. It also improves the end-to-end latency of a realistic workflow by 4x. Tachyon is open source and is deployed at multiple companies.National Science Foundation (U.S.) (CISE Expeditions Award CCF-1139158)Lawrence Berkeley National Laboratory (Award 7076018)United States. Defense Advanced Research Projects Agency (XData Award FA8750-12-2-0331

Performance Optimizations and Operator Semantics for Streaming Data Flow Programs

Unternehmen sammeln mehr Daten als je zuvor und müssen auf diese Informationen zeitnah reagieren. Relationale Datenbanken eignen sich nicht für die latenzfreie Verarbeitung dieser oft unstrukturierten Daten. Um diesen Anforderungen zu begegnen, haben sich in der Datenbankforschung seit dem Anfang der 2000er Jahre zwei neue Forschungsrichtungen etabliert: skalierbare Verarbeitung unstrukturierter Daten und latenzfreie Datenstromverarbeitung. Skalierbare Verarbeitung unstrukturierter Daten, auch bekannt unter dem Begriff "Big Data"-Verarbeitung, hat in der Industrie schnell Einzug erhalten. Gleichzeitig wurden in der Forschung Systeme zur latenzfreien Datenstromverarbeitung entwickelt, die auf eine verteilte Architektur, Skalierbarkeit und datenparallele Verarbeitung setzen. Obwohl diese Systeme in der Industrie vermehrt zum Einsatz kommen, gibt es immer noch große Herausforderungen im praktischen Einsatz. Diese Dissertation verfolgt zwei Hauptziele: Zuerst wird das Laufzeitverhalten von hochskalierbaren datenparallelen Datenstromverarbeitungssystemen untersucht. Im zweiten Hauptteil wird das "Dual Streaming Model" eingeführt, das eine Semantik zur gleichzeitigen Verarbeitung von Datenströmen und Tabellen beschreibt. Das Ziel unserer Untersuchung ist ein besseres Verständnis über das Laufzeitverhalten dieser Systeme zu erhalten und dieses Wissen zu nutzen um Anfragen automatisch ausreichende Rechenkapazität zuzuweisen. Dazu werden ein Kostenmodell und darauf aufbauende Optimierungsalgorithmen für Datenstromanfragen eingeführt, die Datengruppierung und Datenparallelität einbeziehen. Das vorgestellte Datenstromverarbeitungsmodell beschreibt das Ergebnis eines Operators als kontinuierlichen Strom von Veränderugen auf einer Ergebnistabelle. Dabei behandelt unser Modell die Diskrepanz der physikalischen und logischen Ordnung von Datenelementen inhärent und erreicht damit eine deterministische Semantik und eine minimale Verarbeitungslatenz.Modern companies are able to collect more data and require insights from it faster than ever before. Relational databases do not meet the requirements for processing the often unstructured data sets with reasonable performance. The database research community started to address these trends in the early 2000s. Two new research directions have attracted major interest since: large-scale non-relational data processing as well as low-latency data stream processing. Large-scale non-relational data processing, commonly known as "Big Data" processing, was quickly adopted in the industry. In parallel, low latency data stream processing was mainly driven by the research community developing new systems that embrace a distributed architecture, scalability, and exploits data parallelism. While these systems have gained more and more attention in the industry, there are still major challenges to operate them at large scale. The goal of this dissertation is two-fold: First, to investigate runtime characteristics of large scale data-parallel distributed streaming systems. And second, to propose the "Dual Streaming Model" to express semantics of continuous queries over data streams and tables. Our goal is to improve the understanding of system and query runtime behavior with the aim to provision queries automatically. We introduce a cost model for streaming data flow programs taking into account the two techniques of record batching and data parallelization. Additionally, we introduce optimization algorithms that leverage our model for cost-based query provisioning. The proposed Dual Streaming Model expresses the result of a streaming operator as a stream of successive updates to a result table, inducing a duality between streams and tables. Our model handles the inconsistency of the logical and the physical order of records within a data stream natively, which allows for deterministic semantics as well as low latency query execution