Tree-edges deletion problems with bounded diameter obstruction sets

AbstractWe study the following problem: given a tree G and a finite set of trees H, find a subset O of the edges of G such that G-O does not contain a subtree isomorphic to a tree from H, and O has minimum cardinality. We give sharp boundaries on the tractability of this problem: the problem is polynomial when all the trees in H have diameter at most 5, while it is NP-hard when all the trees in H have diameter at most 6. We also show that the problem is polynomial when every tree in H has at most one vertex with degree more than 2, while it is NP-hard when the trees in H can have two such vertices.The polynomial-time algorithms use a variation of a known technique for solving graph problems. While the standard technique is based on defining an equivalence relation on graphs, we define a quasiorder. This new variation might be useful for giving more efficient algorithm for other graph problems

Fast Biclustering by Dual Parameterization

We study two clustering problems, Starforest Editing, the problem of adding and deleting edges to obtain a disjoint union of stars, and the generalization Bicluster Editing. We show that, in addition to being NP-hard, none of the problems can be solved in subexponential time unless the exponential time hypothesis fails. Misra, Panolan, and Saurabh (MFCS 2013) argue that introducing a bound on the number of connected components in the solution should not make the problem easier: In particular, they argue that the subexponential time algorithm for editing to a fixed number of clusters (p-Cluster Editing) by Fomin et al. (J. Comput. Syst. Sci., 80(7) 2014) is an exception rather than the rule. Here, p is a secondary parameter, bounding the number of components in the solution. However, upon bounding the number of stars or bicliques in the solution, we obtain algorithms which run in time $2^{5 \sqrt{pk}} + O(n+m)$ for p-Starforest Editing and $2^{O(p \sqrt{k} \log(pk))} + O(n+m)$ for p-Bicluster Editing. We obtain a similar result for the more general case of t-Partite p-Cluster Editing. This is subexponential in k for fixed number of clusters, since p is then considered a constant. Our results even out the number of multivariate subexponential time algorithms and give reasons to believe that this area warrants further study.Comment: Accepted for presentation at IPEC 201

Obstructions to weak decomposability for simplicial polytopes

Provan and Billera introduced notions of (weak) decomposability of simplicial complexes as a means of attempting to prove polynomial upper bounds on the diameter of the facet-ridge graph of a simplicial polytope. Recently, De Loera and Klee provided the first examples of simplicial polytopes that are not weakly vertex-decomposable. These polytopes are polar to certain simple transportation polytopes. In this paper, we refine their analysis to prove that these $d$-dimensional polytopes are not even weakly $O(\sqrt{d})$-decomposable. As a consequence, (weak) decomposability cannot be used to prove a polynomial version of the Hirsch conjecture

Meta-Kernelization using Well-Structured Modulators

Kernelization investigates exact preprocessing algorithms with performance guarantees. The most prevalent type of parameters used in kernelization is the solution size for optimization problems; however, also structural parameters have been successfully used to obtain polynomial kernels for a wide range of problems. Many of these parameters can be defined as the size of a smallest modulator of the given graph into a fixed graph class (i.e., a set of vertices whose deletion puts the graph into the graph class). Such parameters admit the construction of polynomial kernels even when the solution size is large or not applicable. This work follows up on the research on meta-kernelization frameworks in terms of structural parameters. We develop a class of parameters which are based on a more general view on modulators: instead of size, the parameters employ a combination of rank-width and split decompositions to measure structure inside the modulator. This allows us to lift kernelization results from modulator-size to more general parameters, hence providing smaller kernels. We show (i) how such large but well-structured modulators can be efficiently approximated, (ii) how they can be used to obtain polynomial kernels for any graph problem expressible in Monadic Second Order logic, and (iii) how they allow the extension of previous results in the area of structural meta-kernelization

The Parameterized Complexity of Degree Constrained Editing Problems

This thesis examines degree constrained editing problems within the framework of parameterized complexity. A degree constrained editing problem takes as input a graph and a set of constraints and asks whether the graph can be altered in at most k editing steps such that the degrees of the remaining vertices are within the given constraints. Parameterized complexity gives a framework for examining problems that are traditionally considered intractable and developing efficient exact algorithms for them, or showing that it is unlikely that they have such algorithms, by introducing an additional component to the input, the parameter, which gives additional information about the structure of the problem. If the problem has an algorithm that is exponential in the parameter, but polynomial, with constant degree, in the size of the input, then it is considered to be fixed-parameter tractable. Parameterized complexity also provides an intractability framework for identifying problems that are likely to not have such an algorithm. Degree constrained editing problems provide natural parameterizations in terms of the total cost k of vertex deletions, edge deletions and edge additions allowed, and the upper bound r on the degree of the vertices remaining after editing. We define a class of degree constrained editing problems, WDCE, which generalises several well know problems, such as Degree r Deletion, Cubic Subgraph, r-Regular Subgraph, f-Factor and General Factor. We show that in general if both k and r are part of the parameter, problems in the WDCE class are fixed-parameter tractable, and if parameterized by k or r alone, the problems are intractable in a parameterized sense. We further show cases of WDCE that have polynomial time kernelizations, and in particular when all the degree constraints are a single number and the editing operations include vertex deletion and edge deletion we show that there is a kernel with at most O(kr(k + r)) vertices. If we allow vertex deletion and edge addition, we show that despite remaining fixed-parameter tractable when parameterized by k and r together, the problems are unlikely to have polynomial sized kernelizations, or polynomial time kernelizations of a certain form, under certain complexity theoretic assumptions. We also examine a more general case where given an input graph the question is whether with at most k deletions the graph can be made r-degenerate. We show that in this case the problems are intractable, even when r is a constant