Scalable Applications on Heterogeneous System Architectures: A Systematic Performance Analysis Framework

The efficient parallel execution of scientific applications is a key challenge in high-performance computing (HPC). With growing parallelism and heterogeneity of compute resources as well as increasingly complex software, performance analysis has become an indispensable tool in the development and optimization of parallel programs. This thesis presents a framework for systematic performance analysis of scalable, heterogeneous applications. Based on event traces, it automatically detects the critical path and inefficiencies that result in waiting or idle time, e.g. due to load imbalances between parallel execution streams. As a prerequisite for the analysis of heterogeneous programs, this thesis specifies inefficiency patterns for computation offloading. Furthermore, an essential contribution was made to the development of tool interfaces for OpenACC and OpenMP, which enable a portable data acquisition and a subsequent analysis for programs with offload directives. At present, these interfaces are already part of the latest OpenACC and OpenMP API specification. The aforementioned work, existing preliminary work, and established analysis methods are combined into a generic analysis process, which can be applied across programming models. Based on the detection of wait or idle states, which can propagate over several levels of parallelism, the analysis identifies wasted computing resources and their root cause as well as the critical-path share for each program region. Thus, it determines the influence of program regions on the load balancing between execution streams and the program runtime. The analysis results include a summary of the detected inefficiency patterns and a program trace, enhanced with information about wait states, their cause, and the critical path. In addition, a ranking, based on the amount of waiting time a program region caused on the critical path, highlights program regions that are relevant for program optimization. The scalability of the proposed performance analysis and its implementation is demonstrated using High-Performance Linpack (HPL), while the analysis results are validated with synthetic programs. A scientific application that uses MPI, OpenMP, and CUDA simultaneously is investigated in order to show the applicability of the analysis

Mixed-data-model heterogeneous compilation and OpenMP offloading

Heterogeneous computers combine a general-purpose host processor with domain-specific programmable many-core accelerators, uniting high versatility with high performance and energy efficiency. While the host manages ever-more application memory, accelerators are designed to work mainly on their local memory. This difference in addressed memory leads to a discrepancy between the optimal address width of the host and the accelerator. Today 64-bit host processors are commonplace, but few accelerators exceed 32-bit addressable local memory, a difference expected to increase with 128-bit hosts in the exascale era. Managing this discrepancy requires support for multiple data models in heterogeneous compilers. So far, compiler support for multiple data models has not been explored, which hampers the programmability of such systems and inhibits their adoption. In this work, we perform the first exploration of the feasibility and performance of implementing a mixed-data-mode heterogeneous system. To support this, we present and evaluate the first mixed-data-model compiler, supporting arbitrary address widths on host and accelerator. To hide the inherent complexity and to enable high programmer productivity, we implement transparent offloading on top of OpenMP. The proposed compiler techniques are implemented in LLVM and evaluated on a 64+32-bit heterogeneous SoC. Results on benchmarks from the PolyBench-ACC suite show that memory can be transparently shared between host and accelerator at overheads below 0.7 % compared to 32-bit-only execution, enabling mixed-data-model computers to execute at near-native performance

TC-CIM: Empowering Tensor Comprehensions for Computing-In-Memory

International audienceMemristor-based, non-von-Neumann architectures performing tensor operations directly in memory are a promising approach to address the ever-increasing demand for energy-efficient, high-throughput hardware accelerators for Machine Learning (ML) inference. A major challenge for the programmability and exploitation of such Computing-In-Memory (CIM) architectures consists in the efficient mapping of tensor operations from high-level ML frameworks to fixed-function hardware blocks implementing in-memory computations. We demonstrate the programmability of memristor-based accelerators with TC-CIM, a fully-automatic, end-to-end compilation flow from Tensor Comprehensions, a mathematical notation for tensor operations, to fixed-function memristor-based hardware blocks. Operations suitable for acceleration are identified using Loop Tactics, a declarative framework to describe computational patterns in a poly-hedral representation. We evaluate our compilation flow on a system-level simulator based on Gem5, incorporating crossbar arrays of memristive devices. Our results show that TC-CIM reliably recognizes tensor operations commonly used in ML workloads across multiple benchmarks in order to offload these operations to the accelerator

Scalable Observation, Analysis, and Tuning for Parallel Portability in HPC

It is desirable for general productivity that high-performance computing applications be portable to new architectures, or can be optimized for new workflows and input types, without the need for costly code interventions or algorithmic re-writes. Parallel portability programming models provide the potential for high performance and productivity, however they come with a multitude of runtime parameters that can have significant impact on execution performance. Selecting the optimal set of parameters, so that HPC applications perform well in different system environments and on different input data sets, is not trivial.This dissertation maps out a vision for addressing this parallel portability challenge, and then demonstrates this plan through an effective combination of observability, analysis, and in situ machine learning techniques. A platform for general-purpose observation in HPC contexts is investigated, along with support for its use in human-in-the-loop performance understanding and analysis. The dissertation culminates in a demonstration of lessons learned in order to provide automated tuning of HPC applications utilizing parallel portability frameworks

Many-core and heterogeneous architectures: programming models and compilation toolchains

1noL'abstract è presente nell'allegato / the abstract is in the attachmentopen677. INGEGNERIA INFORMATInopartially_openembargoed_20211002Barchi, Francesc

High-Performance Modelling and Simulation for Big Data Applications

This open access book was prepared as a Final Publication of the COST Action IC1406 “High-Performance Modelling and Simulation for Big Data Applications (cHiPSet)“ project. Long considered important pillars of the scientific method, Modelling and Simulation have evolved from traditional discrete numerical methods to complex data-intensive continuous analytical optimisations. Resolution, scale, and accuracy have become essential to predict and analyse natural and complex systems in science and engineering. When their level of abstraction raises to have a better discernment of the domain at hand, their representation gets increasingly demanding for computational and data resources. On the other hand, High Performance Computing typically entails the effective use of parallel and distributed processing units coupled with efficient storage, communication and visualisation systems to underpin complex data-intensive applications in distinct scientific and technical domains. It is then arguably required to have a seamless interaction of High Performance Computing with Modelling and Simulation in order to store, compute, analyse, and visualise large data sets in science and engineering. Funded by the European Commission, cHiPSet has provided a dynamic trans-European forum for their members and distinguished guests to openly discuss novel perspectives and topics of interests for these two communities. This cHiPSet compendium presents a set of selected case studies related to healthcare, biological data, computational advertising, multimedia, finance, bioinformatics, and telecommunications