Towards a comparative evaluation of text-based specification formalisms and diagrammatic notations

Specification plays a vital role in software engineering to facilitate the development of highly dependable software. The importance of specification in software development is to serve, amongst others, as a communication tool for stakeholders in the software project. The specification also adds to the understanding of operations, and describes the properties of a system. Various techniques may be used for specification work. Z is a formal specification language that is based on a strongly-typed fragment of Zermelo-Fraenkel set theory and first-order logic to provide for precise and unambiguous specifications. Z uses mathematical notation to build abstract data, which is necessary for a specification. The role of abstraction is to describe what the system does without prescribing how it should be done. Diagrams, on the other hand, have also been used in various areas, and in software engineering they could be used to add a visual component to software specifications. It is plausible that diagrams may also be used to reason in a semi-formal way about the properties of a specification. Many diagrammatic languages are based on contours and set theory. Examples of these languages are Euler-, Spider-, Venn- and Pierce diagrams. Euler diagrams form the foundation of most diagrams that are based on closed curves. Diagrams, on the other hand, have also been used in various areas, and in software engineering they could be used to add a visual component to software specifications. It is plausible that diagrams may also be used to reason in a semi-formal way about the properties of a specification. Many diagrammatic languages are based on contours and set theory. Examples of these languages are Euler-, Spider-, Venn- and Pierce diagrams. Euler diagrams form the foundation of most diagrams that are based on closed curves. The purpose of this research is to demonstrate the extent to which diagrams can be used to represent a Z specification. A case study is used to transform the specification modelled with Z language into a diagrammatic specification. Euler, spider, Venn and Pierce diagrams are combined for this purpose, to form one diagrammatic notation that is used to transform a Z specificationSchool of ComputingM. Sc. (Information Systems

Declarative Specification

Deriving formal specifications from informal requirements is extremely difficult since one has to overcome the conceptual gap between an application domain and the domain of formal specification methods. To reduce this gap we introduce application-specific specification languages, i.e., graphical and textual notations that can be unambiguously mapped to formal specifications in a logic language. We describe a number of realised approaches based on this idea, and evaluate them with respect to their domain specificity vs. generalit

Formalizing graphical notations

The thesis describes research into graphical notations for software engineering, with a principal interest in ways of formalizing them. The research seeks to provide a theoretical basis that will help in designing both notations and the software tools that process them. The work starts from a survey of literature on notation, followed by a review of techniques for formal description and for computational handling of notations. The survey concentrates on collecting views of the benefits and the problems attending notation use in software development; the review covers picture description languages, grammars and tools such as generic editors and visual programming environments. The main problem of notation is found to be a lack of any coherent, rigorous description methods. The current approaches to this problem are analysed as lacking in consensus on syntax specification and also lacking a clear focus on a defined concept of notated expression. To address these deficiencies, the thesis embarks upon an exploration of serniotic, linguistic and logical theory; this culminates in a proposed formalization of serniosis in notations, using categorial model theory as a mathematical foundation. An argument about the structure of sign systems leads to an analysis of notation into a layered system of tractable theories, spanning the gap between expressive pictorial medium and subject domain. This notion of 'tectonic' theory aims to treat both diagrams and formulae together. The research gives details of how syntactic structure can be sketched in a mathematical sense, with examples applying to software development diagrams, offering a new solution to the problem of notation specification. Based on these methods, the thesis discusses directions for resolving the harder problems of supporting notation design, processing and computer-aided generic editing. A number of future research areas are thereby opened up. For practical trial of the ideas, the work proceeds to the development and partial implementation of a system to aid the design of notations and editors. Finally the thesis is evaluated as a contribution to theory in an area which has not attracted a standard approach

A Process Modelling Framework Based on Point Interval Temporal Logic with an Application to Modelling Patient Flows

This thesis considers an application of a temporal theory to describe and model the patient journey in the hospital accident and emergency (A&E) department. The aim is to introduce a generic but dynamic method applied to any setting, including healthcare. Constructing a consistent process model can be instrumental in streamlining healthcare issues. Current process modelling techniques used in healthcare such as flowcharts, unified modelling language activity diagram (UML AD), and business process modelling notation (BPMN) are intuitive and imprecise. They cannot fully capture the complexities of the types of activities and the full extent of temporal constraints to an extent where one could reason about the flows. Formal approaches such as Petri have also been reviewed to investigate their applicability to the healthcare domain to model processes. Additionally, to schedule patient flows, current modelling standards do not offer any formal mechanism, so healthcare relies on critical path method (CPM) and program evaluation review technique (PERT), that also have limitations, i.e. finish-start barrier. It is imperative to specify the temporal constraints between the start and/or end of a process, e.g., the beginning of a process A precedes the start (or end) of a process B. However, these approaches failed to provide us with a mechanism for handling these temporal situations. If provided, a formal representation can assist in effective knowledge representation and quality enhancement concerning a process. Also, it would help in uncovering complexities of a system and assist in modelling it in a consistent way which is not possible with the existing modelling techniques. The above issues are addressed in this thesis by proposing a framework that would provide a knowledge base to model patient flows for accurate representation based on point interval temporal logic (PITL) that treats point and interval as primitives. These objects would constitute the knowledge base for the formal description of a system. With the aid of the inference mechanism of the temporal theory presented here, exhaustive temporal constraints derived from the proposed axiomatic system’ components serves as a knowledge base. The proposed methodological framework would adopt a model-theoretic approach in which a theory is developed and considered as a model while the corresponding instance is considered as its application. Using this approach would assist in identifying core components of the system and their precise operation representing a real-life domain deemed suitable to the process modelling issues specified in this thesis. Thus, I have evaluated the modelling standards for their most-used terminologies and constructs to identify their key components. It will also assist in the generalisation of the critical terms (of process modelling standards) based on their ontology. A set of generalised terms proposed would serve as an enumeration of the theory and subsume the core modelling elements of the process modelling standards. The catalogue presents a knowledge base for the business and healthcare domains, and its components are formally defined (semantics). Furthermore, a resolution theorem-proof is used to show the structural features of the theory (model) to establish it is sound and complete. After establishing that the theory is sound and complete, the next step is to provide the instantiation of the theory. This is achieved by mapping the core components of the theory to their corresponding instances. Additionally, a formal graphical tool termed as point graph (PG) is used to visualise the cases of the proposed axiomatic system. PG facilitates in modelling, and scheduling patient flows and enables analysing existing models for possible inaccuracies and inconsistencies supported by a reasoning mechanism based on PITL. Following that, a transformation is developed to map the core modelling components of the standards into the extended PG (PG*) based on the semantics presented by the axiomatic system. A real-life case (from the King’s College hospital accident and emergency (A&E) department’s trauma patient pathway) is considered to validate the framework. It is divided into three patient flows to depict the journey of a patient with significant trauma, arriving at A&E, undergoing a procedure and subsequently discharged. Their staff relied upon the UML-AD and BPMN to model the patient flows. An evaluation of their representation is presented to show the shortfalls of the modelling standards to model patient flows. The last step is to model these patient flows using the developed approach, which is supported by enhanced reasoning and scheduling

Revised submission for MOF 2.0 query / views / transformations RFP.

This submission presents the QVT-Partners proposal for the MOF 2.0 QVT standard. The proposal consists of a number of key ingredients which we briefly discuss in this section. -Specification and implementation: A common scenario in the development of any artifact is to first create a specification of the form and behaviour of the the artifact, and then realise an implementation which satisfies the specification. The specification is characterised by a lack of implementation details, but having a close correspondence to the requirements; conversely an implementation may lack close correspondence to the requirements. This submission maintains this important distinction. Relations provide a specification oriented view of the relationship between models and are specified in a language that can be easily understood. They say what it means to translate between several models but without saying precisely how the translation is achieved. Those details are realised by mappings which characterise the means by which models are translated. It should be noted though, that while the mappings language is rich enough to provide an implementation of relations it also manages to maintain a requirements oriented focus. This may give rise to a scenario where developers prefer to omit relations and directly define mappings. -Scalability and reuse: Decomposition is a key approach to managing complexity. This submission provides a number of composition mechanisms whereby relations and mappings can be composed to form more complex specifications. These mechanisms also aid reuse since mappings and relations can be treated as reusable components which are composed for specific contexts. -Usability: Diagrammatic notations have been important to the success of many OMG standards. This proposal presents a diagrammatic notation which is an extension of collaboration object diagrams and is therefore familiar to many end users. A criticism often levelled at diagrammatic notations is their scalability. This submission also presents a textual syntax, constructs of the diagrammatic notations are closely aligned with its textual counterpart. Considering the domains of relations and mappings at the generic type level is often too limiting. Instead it often is specific-types of things that are of interest. This submission uses patterns to describe the domains of both relations and mappings. Patterns are a means of succinctly describing specific-types of model elements and enable domains of interest to be rapidly stated with ease. -Semantic soundness: By definition a standard should give rise to consistency across differing implementations. It is important that an end user can get the same results on two different implementations. For this reason, this submission goes to some effort to ensure that all the constructs have a well-defined semantic basis. This is achieved by treating the submission in two parts. The infrastructure part has a small number of constructs which can be easily and consistently understood from informal descriptions (although a mathematical semantics is given in Appendix B for the sake of completeness and rigour). The superstructure part uses the infrastructure as its semantic basis and defines the syntax that the end user deals with. The relationship between the superstructure and the infrastructure is expressed as a translation

Specification and implementation of mapping rule visualization and editing : MapVOWL and the RMLEditor

Visual tools are implemented to help users in defining how to generate Linked Data from raw data. This is possible thanks to mapping languages which enable detaching mapping rules from the implementation that executes them. However, no thorough research has been conducted so far on how to visualize such mapping rules, especially if they become large and require considering multiple heterogeneous raw data sources and transformed data values. In the past, we proposed the RMLEditor, a visual graph-based user interface, which allows users to easily create mapping rules for generating Linked Data from raw data. In this paper, we build on top of our existing work: we (i) specify a visual notation for graph visualizations used to represent mapping rules, (ii) introduce an approach for manipulating rules when large visualizations emerge, and (iii) propose an approach to uniformly visualize data fraction of raw data sources combined with an interactive interface for uniform data fraction transformations. We perform two additional comparative user studies. The first one compares the use of the visual notation to present mapping rules to the use of a mapping language directly, which reveals that the visual notation is preferred. The second one compares the use of the graph-based RMLEditor for creating mapping rules to the form-based RMLx Visual Editor, which reveals that graph-based visualizations are preferred to create mapping rules through the use of our proposed visual notation and uniform representation of heterogeneous data sources and data values. (C) 2018 Elsevier B.V. All rights reserved