Spectral methods for CFD

One of the objectives of these notes is to provide a basic introduction to spectral methods with a particular emphasis on applications to computational fluid dynamics. Another objective is to summarize some of the most important developments in spectral methods in the last two years. The fundamentals of spectral methods for simple problems will be covered in depth, and the essential elements of several fluid dynamical applications will be sketched

Response of Bose gases in time-dependent optical superlattices

The dynamic response of ultracold Bose gases in one-dimensional optical lattices and superlattices is investigated based on exact numerical time evolutions in the framework of the Bose-Hubbard model. The system is excited by a temporal amplitude modulation of the lattice potential, as it was done in recent experiments. For regular lattice potentials, the dynamic signatures of the superfluid to Mott-insulator transition are studied and the position and the fine-structure of the resonances is explained by a linear response analysis. Using direct simulations and the perturbative analysis it is shown that in the presence of a two-colour superlattice the excitation spectrum changes significantly when going from the homogeneous Mott-insulator the quasi Bose-glass phase. A characteristic and experimentally accessible signature for the quasi Bose-glass is the appearance of low-lying resonances and a suppression of the dominant resonance of the Mott-insulator phase.Comment: 20 pages, 9 figures; added references and corrected typo

A fluctuating boundary integral method for Brownian suspensions

We present a fluctuating boundary integral method (FBIM) for overdamped Brownian Dynamics (BD) of two-dimensional periodic suspensions of rigid particles of complex shape immersed in a Stokes fluid. We develop a novel approach for generating Brownian displacements that arise in response to the thermal fluctuations in the fluid. Our approach relies on a first-kind boundary integral formulation of a mobility problem in which a random surface velocity is prescribed on the particle surface, with zero mean and covariance proportional to the Green's function for Stokes flow (Stokeslet). This approach yields an algorithm that scales linearly in the number of particles for both deterministic and stochastic dynamics, handles particles of complex shape, achieves high order of accuracy, and can be generalized to three dimensions and other boundary conditions. We show that Brownian displacements generated by our method obey the discrete fluctuation-dissipation balance relation (DFDB). Based on a recently-developed Positively Split Ewald method [A. M. Fiore, F. Balboa Usabiaga, A. Donev and J. W. Swan, J. Chem. Phys., 146, 124116, 2017], near-field contributions to the Brownian displacements are efficiently approximated by iterative methods in real space, while far-field contributions are rapidly generated by fast Fourier-space methods based on fluctuating hydrodynamics. FBIM provides the key ingredient for time integration of the overdamped Langevin equations for Brownian suspensions of rigid particles. We demonstrate that FBIM obeys DFDB by performing equilibrium BD simulations of suspensions of starfish-shaped bodies using a random finite difference temporal integrator.Comment: Submitted to J. Comp. Phy

IllinoisGRMHD: An Open-Source, User-Friendly GRMHD Code for Dynamical Spacetimes

In the extreme violence of merger and mass accretion, compact objects like black holes and neutron stars are thought to launch some of the most luminous outbursts of electromagnetic and gravitational wave energy in the Universe. Modeling these systems realistically is a central problem in theoretical astrophysics, but has proven extremely challenging, requiring the development of numerical relativity codes that solve Einstein's equations for the spacetime, coupled to the equations of general relativistic (ideal) magnetohydrodynamics (GRMHD) for the magnetized fluids. Over the past decade, the Illinois Numerical Relativity (ILNR) Group's dynamical spacetime GRMHD code has proven itself as a robust and reliable tool for theoretical modeling of such GRMHD phenomena. However, the code was written "by experts and for experts" of the code, with a steep learning curve that would severely hinder community adoption if it were open-sourced. Here we present IllinoisGRMHD, which is an open-source, highly-extensible rewrite of the original closed-source GRMHD code of the ILNR Group. Reducing the learning curve was the primary focus of this rewrite, with the goal of facilitating community involvement in the code's use and development, as well as the minimization of human effort in generating new science. IllinoisGRMHD also saves computer time, generating roundoff-precision identical output to the original code on adaptive-mesh grids, but nearly twice as fast at scales of hundreds to thousands of cores.Comment: 37 pages, 6 figures, single column. Matches published versio

Adaptive time-stepping for incompressible flow. Part II: Navier-Stokes equations

We outline a new class of robust and efficient methods for solving the Navier- Stokes equations. We describe a general solution strategy that has two basic building blocks: an implicit time integrator using a stabilized trapezoid rule with an explicit Adams-Bashforth method for error control, and a robust Krylov subspace solver for the spatially discretized system. We present numerical experiments illustrating the potential of our approach. © 2010 Society for Industrial and Applied Mathematics