Contextualization of topics - browsing through terms, authors, journals and cluster allocations

This paper builds on an innovative Information Retrieval tool, Ariadne. The tool has been developed as an interactive network visualization and browsing tool for large-scale bibliographic databases. It basically allows to gain insights into a topic by contextualizing a search query (Koopman et al., 2015). In this paper, we apply the Ariadne tool to a far smaller dataset of 111,616 documents in astronomy and astrophysics. Labeled as the Berlin dataset, this data have been used by several research teams to apply and later compare different clustering algorithms. The quest for this team effort is how to delineate topics. This paper contributes to this challenge in two different ways. First, we produce one of the different cluster solution and second, we use Ariadne (the method behind it, and the interface - called LittleAriadne) to display cluster solutions of the different group members. By providing a tool that allows the visual inspection of the similarity of article clusters produced by different algorithms, we present a complementary approach to other possible means of comparison. More particular, we discuss how we can - with LittleAriadne - browse through the network of topical terms, authors, journals and cluster solutions in the Berlin dataset and compare cluster solutions as well as see their context.Comment: proceedings of the ISSI 2015 conference (accepted

Web-Based Visualization of Very Large Scientific Astronomy Imagery

Visualizing and navigating through large astronomy images from a remote location with current astronomy display tools can be a frustrating experience in terms of speed and ergonomics, especially on mobile devices. In this paper, we present a high performance, versatile and robust client-server system for remote visualization and analysis of extremely large scientific images. Applications of this work include survey image quality control, interactive data query and exploration, citizen science, as well as public outreach. The proposed software is entirely open source and is designed to be generic and applicable to a variety of datasets. It provides access to floating point data at terabyte scales, with the ability to precisely adjust image settings in real-time. The proposed clients are light-weight, platform-independent web applications built on standard HTML5 web technologies and compatible with both touch and mouse-based devices. We put the system to the test and assess the performance of the system and show that a single server can comfortably handle more than a hundred simultaneous users accessing full precision 32 bit astronomy data.Comment: Published in Astronomy & Computing. IIPImage server available from http://iipimage.sourceforge.net . Visiomatic code and demos available from http://www.visiomatic.org

A Development Environment for Visual Physics Analysis

The Visual Physics Analysis (VISPA) project integrates different aspects of physics analyses into a graphical development environment. It addresses the typical development cycle of (re-)designing, executing and verifying an analysis. The project provides an extendable plug-in mechanism and includes plug-ins for designing the analysis flow, for running the analysis on batch systems, and for browsing the data content. The corresponding plug-ins are based on an object-oriented toolkit for modular data analysis. We introduce the main concepts of the project, describe the technical realization and demonstrate the functionality in example applications

Collaborative yet independent: Information practices in the physical sciences

In many ways, the physical sciences are at the forefront of using digital tools and methods to work with information and data. However, the fields and disciplines that make up the physical sciences are by no means uniform, and physical scientists find, use, and disseminate information in a variety of ways. This report examines information practices in the physical sciences across seven cases, and demonstrates the richly varied ways in which physical scientists work, collaborate, and share information and data. This report details seven case studies in the physical sciences. For each case, qualitative interviews and focus groups were used to understand the domain. Quantitative data gathered from a survey of participants highlights different information strategies employed across the cases, and identifies important software used for research. Finally, conclusions from across the cases are drawn, and recommendations are made. This report is the third in a series commissioned by the Research Information Network (RIN), each looking at information practices in a specific domain (life sciences, humanities, and physical sciences). The aim is to understand how researchers within a range of disciplines find and use information, and in particular how that has changed with the introduction of new technologies

Search and Discovery Tools for Astronomical On-line Resources and Services

A growing number of astronomical resources and data or information services are made available through the Internet. However valuable information is frequently hidden in a deluge of non-pertinent or non up-to-date documents. At a first level, compilations of astronomical resources provide help for selecting relevant sites. Combining yellow-page services and meta-databases of active pointers may be an efficient solution to the data retrieval problem. Responses generated by submission of queries to a set of heterogeneous resources are difficult to merge or cross-match, because different data providers generally use different data formats: new endeavors are under way to tackle this problem. We review the technical challenges involved in trying to provide general search and discovery tools, and to integrate them through upper level interfaces.Comment: 7 pages, 2 Postscript figures; to be published in A&A

Visualization-driven Structural and Statistical Analysis of Turbulent Flows

Knowledge extraction from data volumes of ever increasing size requires ever more flexible tools to facilitate interactive query. In- teractivity enables real-time hypothesis testing and scientific discovery, but can generally not be achieved without some level of data reduction. The approach described in this paper combines multi-resolution access, region-of-interest extraction, and structure identification in order to pro- vide interactive spatial and statistical analysis of a terascale data volume. Unique aspects of our approach include the incorporation of both local and global statistics of the flow structures, and iterative refinement fa- cilities, which combine geometry, topology, and statistics to allow the user to effectively tailor the analysis and visualization to the science. Working together, these facilities allow a user to focus the spatial scale and domain of the analysis and perform an appropriately tailored mul- tivariate visualization of the corresponding data. All of these ideas and algorithms are instantiated in a deployed visualization and analysis tool called VAPOR, which is in routine use by scientists internationally. In data from a 10243 simulation of a forced turbulent flow, VAPOR allowed us to perform a visual data exploration of the flow properties at interac- tive speeds, leading to the discovery of novel scientific properties of the flow, in the form of two distinct vortical structure populations. These structures would have been very difficult (if not impossible) to find with statistical overviews or other existing visualization-driven analysis ap- proaches. This kind of intelligent, focused analysis/refinement approach will become even more important as computational science moves to- wards petascale applications

You can't always sketch what you want: Understanding Sensemaking in Visual Query Systems

Visual query systems (VQSs) empower users to interactively search for line charts with desired visual patterns, typically specified using intuitive sketch-based interfaces. Despite decades of past work on VQSs, these efforts have not translated to adoption in practice, possibly because VQSs are largely evaluated in unrealistic lab-based settings. To remedy this gap in adoption, we collaborated with experts from three diverse domains---astronomy, genetics, and material science---via a year-long user-centered design process to develop a VQS that supports their workflow and analytical needs, and evaluate how VQSs can be used in practice. Our study results reveal that ad-hoc sketch-only querying is not as commonly used as prior work suggests, since analysts are often unable to precisely express their patterns of interest. In addition, we characterize three essential sensemaking processes supported by our enhanced VQS. We discover that participants employ all three processes, but in different proportions, depending on the analytical needs in each domain. Our findings suggest that all three sensemaking processes must be integrated in order to make future VQSs useful for a wide range of analytical inquiries.Comment: Accepted for presentation at IEEE VAST 2019, to be held October 20-25 in Vancouver, Canada. Paper will also be published in a special issue of IEEE Transactions on Visualization and Computer Graphics (TVCG) IEEE VIS (InfoVis/VAST/SciVis) 2019 ACM 2012 CCS - Human-centered computing, Visualization, Visualization design and evaluation method

Spectroscopic Analysis in the Virtual Observatory Environment with SPLAT-VO

SPLAT-VO is a powerful graphical tool for displaying, comparing, modifying and analyzing astronomical spectra, as well as searching and retrieving spectra from services around the world using Virtual Observatory (VO) protocols and services. The development of SPLAT-VO started in 1999, as part of the Starlink StarJava initiative, sometime before that of the VO, so initial support for the VO was necessarily added once VO standards and services became available. Further developments were supported by the Joint Astronomy Centre, Hawaii until 2009. Since end of 2011 development of SPLAT-VO has been continued by the German Astrophysical Virtual Observatory, and the Astronomical Institute of the Academy of Sciences of the Czech Republic. From this time several new features have been added, including support for the latest VO protocols, along with new visualization and spectra storing capabilities. This paper presents the history of SPLAT-VO, it's capabilities, recent additions and future plans, as well as a discussion on the motivations and lessons learned up to now.Comment: 15 pages, 6 figures, accepted for publication in Astronomy & Computin

Hierarchical progressive surveys. Multi-resolution HEALPix data structures for astronomical images, catalogues, and 3-dimensional data cubes

Scientific exploitation of the ever increasing volumes of astronomical data requires efficient and practical methods for data access, visualisation, and analysis. Hierarchical sky tessellation techniques enable a multi-resolution approach to organising data on angular scales from the full sky down to the individual image pixels. Aims. We aim to show that the Hierarchical progressive survey (HiPS) scheme for describing astronomical images, source catalogues, and three-dimensional data cubes is a practical solution to managing large volumes of heterogeneous data and that it enables a new level of scientific interoperability across large collections of data of these different data types. Methods. HiPS uses the HEALPix tessellation of the sphere to define a hierarchical tile and pixel structure to describe and organise astronomical data. HiPS is designed to conserve the scientific properties of the data alongside both visualisation considerations and emphasis on the ease of implementation. We describe the development of HiPS to manage a large number of diverse image surveys, as well as the extension of hierarchical image systems to cube and catalogue data. We demonstrate the interoperability of HiPS and Multi-Order Coverage (MOC) maps and highlight the HiPS mechanism to provide links to the original data. Results. Hierarchical progressive surveys have been generated by various data centres and groups for ~200 data collections including many wide area sky surveys, and archives of pointed observations. These can be accessed and visualised in Aladin, Aladin Lite, and other applications. HiPS provides a basis for further innovations in the use of hierarchical data structures to facilitate the description and statistical analysis of large astronomical data sets.Comment: 21 pages, 6 figures. Accepted for publication in Astronomy & Astrophysic