6 research outputs found

    The Polytope Formalism: isomerism and associated unimolecular isomerisation

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    This thesis concerns the ontology of isomerism, this encompassing the conceptual frameworks and relationships that comprise the subject matter; the necessary formal definitions, nomenclature, and representations that have impacts reaching into unexpected areas such as drug registration and patent specifications; the requisite controlled and precise vocabulary that facilitates nuanced communication; and the digital/computational formalisms that underpin the chemistry software and database tools that empower chemists to perform much of their work. Using conceptual tools taken from Combinatorics, and Graph Theory, means are presented to provide a unified description of isomerism and associated unimolecular isomerisation spanning both constitutional isomerism and stereoisomerism called the Polytope Formalism. This includes unification of the varying approaches historically taken to describe and understand stereoisomerism in organic and inorganic compounds. Work for this Thesis began with the synthesis, isolation, and characterisation of compounds not adequately describable using existing IUPAC recommendations. Generalisation of the polytopal-rearrangements model of stereoisomerisation used for inorganic chemistry led to the prescriptions that could deal with the synthesised compounds, revealing an unrecognised fundamental form of isomerism called akamptisomerism. Following on, this Thesis describes how in attempting to place akamptisomerism within the context of existing stereoisomerism reveals significant systematic deficiencies in the IUPAC recommendations. These shortcomings have limited the conceptualisation of broad classes of compounds and hindered development of molecules for medicinal and technological applications. It is shown how the Polytope Formalism can be applied to the description of constitutional isomerism in a practical manner. Finally, a radically different medicinal chemistry design strategy with broad application, based upon the principles, is describe

    A hardware-software codesign framework for cellular computing

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    Until recently, the ever-increasing demand of computing power has been met on one hand by increasing the operating frequency of processors and on the other hand by designing architectures capable of exploiting parallelism at the instruction level through hardware mechanisms such as super-scalar execution. However, both these approaches seem to have reached a plateau, mainly due to issues related to design complexity and cost-effectiveness. To face the stabilization of performance of single-threaded processors, the current trend in processor design seems to favor a switch to coarser-grain parallelization, typically at the thread level. In other words, high computational power is achieved not only by a single, very fast and very complex processor, but through the parallel operation of several processors, each executing a different thread. Extrapolating this trend to take into account the vast amount of on-chip hardware resources that will be available in the next few decades (either through further shrinkage of silicon fabrication processes or by the introduction of molecular-scale devices), together with the predicted features of such devices (e.g., the impossibility of global synchronization or higher failure rates), it seems reasonable to foretell that current design techniques will not be able to cope with the requirements of next-generation electronic devices and that novel design tools and programming methods will have to be devised. A tempting source of inspiration to solve the problems implied by a massively parallel organization and inherently error-prone substrates is biology. In fact, living beings possess characteristics, such as robustness to damage and self-organization, which were shown in previous research as interesting to be implemented in hardware. For instance, it was possible to realize relatively simple systems, such as a self-repairing watch. Overall, these bio-inspired approaches seem very promising but their interest for a wider audience is problematic because their heavily hardware-oriented designs lack some of the flexibility achievable with a general purpose processor. In the context of this thesis, we will introduce a processor-grade processing element at the heart of a bio-inspired hardware system. This processor, based on a single-instruction, features some key properties that allow it to maintain the versatility required by the implementation of bio-inspired mechanisms and to realize general computation. We will also demonstrate that the flexibility of such a processor enables it to be evolved so it can be tailored to different types of applications. In the second half of this thesis, we will analyze how the implementation of a large number of these processors can be used on a hardware platform to explore various bio-inspired mechanisms. Based on an extensible platform of many FPGAs, configured as a networked structure of processors, the hardware part of this computing framework is backed by an open library of software components that provides primitives for efficient inter-processor communication and distributed computation. We will show that this dual software–hardware approach allows a very quick exploration of different ways to solve computational problems using bio-inspired techniques. In addition, we also show that the flexibility of our approach allows it to exploit replication as a solution to issues that concern standard embedded applications

    ВСхнология комплСксной ΠΏΠΎΠ΄Π΄Π΅Ρ€ΠΆΠΊΠΈ ΠΆΠΈΠ·Π½Π΅Π½Π½ΠΎΠ³ΠΎ Ρ†ΠΈΠΊΠ»Π° сСмантичСски совмСстимых ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚ΡƒΠ°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΡŒΡŽΡ‚Π΅Ρ€Π½Ρ‹Ρ… систСм Π½ΠΎΠ²ΠΎΠ³ΠΎ поколСния

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    Π’ ΠΈΠ·Π΄Π°Π½ΠΈΠΈ прСдставлСно описаниС Ρ‚Π΅ΠΊΡƒΡ‰Π΅ΠΉ вСрсии ΠΎΡ‚ΠΊΡ€Ρ‹Ρ‚ΠΎΠΉ Ρ‚Π΅Ρ…Π½ΠΎΠ»ΠΎΠ³ΠΈΠΈ онтологичСского проСктирования, производства ΠΈ эксплуатации сСмантичСски совмСстимых Π³ΠΈΠ±Ρ€ΠΈΠ΄Π½Ρ‹Ρ… ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚ΡƒΠ°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΡŒΡŽΡ‚Π΅Ρ€Π½Ρ‹Ρ… систСм (Π’Π΅Ρ…Π½ΠΎΠ»ΠΎΠ³ΠΈΠΈ OSTIS). ΠŸΡ€Π΅Π΄Π»ΠΎΠΆΠ΅Π½Π° стандартизация ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚ΡƒΠ°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΡŒΡŽΡ‚Π΅Ρ€Π½Ρ‹Ρ… систСм, Π° Ρ‚Π°ΠΊΠΆΠ΅ стандартизация ΠΌΠ΅Ρ‚ΠΎΠ΄ΠΎΠ² ΠΈ срСдств ΠΈΡ… проСктирования, Ρ‡Ρ‚ΠΎ являСтся ваТнСйшим Ρ„Π°ΠΊΡ‚ΠΎΡ€ΠΎΠΌ, ΠΎΠ±Π΅ΡΠΏΠ΅Ρ‡ΠΈΠ²Π°ΡŽΡ‰ΠΈΠΌ ΡΠ΅ΠΌΠ°Π½Ρ‚ΠΈΡ‡Π΅ΡΠΊΡƒΡŽ ΡΠΎΠ²ΠΌΠ΅ΡΡ‚ΠΈΠΌΠΎΡΡ‚ΡŒ ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚ΡƒΠ°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΡŒΡŽΡ‚Π΅Ρ€Π½Ρ‹Ρ… систСм ΠΈ ΠΈΡ… ΠΊΠΎΠΌΠΏΠΎΠ½Π΅Π½Ρ‚ΠΎΠ², Ρ‡Ρ‚ΠΎ сущСствСнноС сниТСниС трудоСмкости Ρ€Π°Π·Ρ€Π°Π±ΠΎΡ‚ΠΊΠΈ Ρ‚Π°ΠΊΠΈΡ… систСм. Книга ΠΏΡ€Π΅Π΄Π½Π°Π·Π½Π°Ρ‡Π΅Π½Π° всСм, ΠΊΡ‚ΠΎ интСрСсуСтся ΠΏΡ€ΠΎΠ±Π»Π΅ΠΌΠ°ΠΌΠΈ искусствСнного ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚Π°, Π° Ρ‚Π°ΠΊΠΆΠ΅ спСциалистам Π² области ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚ΡƒΠ°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΡŒΡŽΡ‚Π΅Ρ€Π½Ρ‹Ρ… систСм ΠΈ ΠΈΠ½ΠΆΠ΅Π½Π΅Ρ€ΠΈΠΈ Π·Π½Π°Π½ΠΈΠΉ. ΠœΠΎΠΆΠ΅Ρ‚ Π±Ρ‹Ρ‚ΡŒ использована студСнтами, магистрантами ΠΈ аспирантами ΡΠΏΠ΅Ρ†ΠΈΠ°Π»ΡŒΠ½ΠΎΡΡ‚ΠΈ Β«Π˜ΡΠΊΡƒΡΡΡ‚Π²Π΅Π½Π½Ρ‹ΠΉ ΠΈΠ½Ρ‚Π΅Π»Π»Π΅ΠΊΡ‚Β». Π’Π°Π±Π». 8. Ил. 223. Π‘ΠΈΠ±Π»ΠΈΠΎΠ³Ρ€.: 665 Π½Π°Π·Π²
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