Evaluation of CNN-based Single-Image Depth Estimation Methods

While an increasing interest in deep models for single-image depth estimation methods can be observed, established schemes for their evaluation are still limited. We propose a set of novel quality criteria, allowing for a more detailed analysis by focusing on specific characteristics of depth maps. In particular, we address the preservation of edges and planar regions, depth consistency, and absolute distance accuracy. In order to employ these metrics to evaluate and compare state-of-the-art single-image depth estimation approaches, we provide a new high-quality RGB-D dataset. We used a DSLR camera together with a laser scanner to acquire high-resolution images and highly accurate depth maps. Experimental results show the validity of our proposed evaluation protocol

From Data Fusion to Knowledge Fusion

The task of {\em data fusion} is to identify the true values of data items (eg, the true date of birth for {\em Tom Cruise}) among multiple observed values drawn from different sources (eg, Web sites) of varying (and unknown) reliability. A recent survey\cite{LDL+12} has provided a detailed comparison of various fusion methods on Deep Web data. In this paper, we study the applicability and limitations of different fusion techniques on a more challenging problem: {\em knowledge fusion}. Knowledge fusion identifies true subject-predicate-object triples extracted by multiple information extractors from multiple information sources. These extractors perform the tasks of entity linkage and schema alignment, thus introducing an additional source of noise that is quite different from that traditionally considered in the data fusion literature, which only focuses on factual errors in the original sources. We adapt state-of-the-art data fusion techniques and apply them to a knowledge base with 1.6B unique knowledge triples extracted by 12 extractors from over 1B Web pages, which is three orders of magnitude larger than the data sets used in previous data fusion papers. We show great promise of the data fusion approaches in solving the knowledge fusion problem, and suggest interesting research directions through a detailed error analysis of the methods.Comment: VLDB'201

Functionally informed fine-mapping and polygenic localization of complex trait heritability

Fine-mapping aims to identify causal variants impacting complex traits. We propose PolyFun, a computationally scalable framework to improve fine-mapping accuracy by leveraging functional annotations across the entire genome-not just genome-wide-significant loci-to specify prior probabilities for fine-mapping methods such as SuSiE or FINEMAP. In simulations, PolyFun + SuSiE and PolyFun + FINEMAP were well calibrated and identified >20% more variants with a posterior causal probability >0.95 than identified in their nonfunctionally informed counterparts. In analyses of 49 UK Biobank traits (average n = 318,000), PolyFun + SuSiE identified 3,025 fine-mapped variant-trait pairs with posterior causal probability >0.95, a >32% improvement versus SuSiE. We used posterior mean per-SNP heritabilities from PolyFun + SuSiE to perform polygenic localization, constructing minimal sets of common SNPs causally explaining 50% of common SNP heritability; these sets ranged in size from 28 (hair color) to 3,400 (height) to 2 million (number of children). In conclusion, PolyFun prioritizes variants for functional follow-up and provides insights into complex trait architectures. PolyFun is a computationally scalable framework for functionally informed fine-mapping that makes full use of genome-wide data. It prioritizes more variants than previous methods when applied to 49 complex traits from UK Biobank.Peer reviewe

Distance Estimation of an Unknown Person from a Portrait

We propose the first automated method for estimating distance from frontal pictures of unknown faces. Camera calibration is not necessary, nor is the reconstruction of a 3D representation of the shape of the head. Our method is based on estimating automatically the position of face and head landmarks in the image, and then using a regressor to estimate distance from such measurements. We collected and annotated a dataset of frontal portraits of 53 individuals spanning a number of attributes (sex, age, race, hair), each photographed from seven distances. We find that our proposed method outperforms humans performing the same task. We observe that different physiognomies will bias systematically the estimate of distance, i.e. some people look closer than others. We expire which landmarks are more important for this task

The mixture problem in computer mapping of terrain: Improved techniques for establishing spectral signatures, atmospheric path radiance, and transmittance

There are no author-identified significant results in this report

Predicting pathway membership via domain signatures

Motivation: Functional characterization of genes is of great importance for the understanding of complex cellular processes. Valuable information for this purpose can be obtained from pathway databases, like KEGG. However, only a small fraction of genes is annotated with pathway information up to now. In contrast, information on contained protein domains can be obtained for a significantly higher number of genes, e.g. from the InterPro database